RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 SOX12O15370 315 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 IQCB1Q15051 598 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 NEMFO60524 1076 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 CLCN6P51797 869 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 STK3Q13188 491 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 SSH3Q8TE77 659 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 FHOD1Q9Y613 1164 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 PDCP20941 246 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 MRFAP1L1Q96HT8 127 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
CDCA3-212ENST00000604599 BECN2A8MW95 431 aa14.64□□□□□ -0.07
CDCA3-212ENST00000604599 SRGAP3O43295 1099 aa14.64□□□□□ -0.07
CDCA3-212ENST00000604599 H2AFXP16104 143 aaPredicted RBP14.64□□□□□ -0.07
CDCA3-212ENST00000604599 CEBPZQ03701 1054 aaKnown RBP14.64□□□□□ -0.07
CDCA3-212ENST00000604599 SARM1Q6SZW1 724 aa14.64□□□□□ -0.07
CDCA3-212ENST00000604599 NEK11Q8NG66 645 aa14.64□□□□□ -0.07
CDCA3-212ENST00000604599 FBXW7Q969H0 707 aa14.64□□□□□ -0.07
CDCA3-212ENST00000604599 ALKQ9UM73 1620 aa14.64□□□□□ -0.07
CDCA3-212ENST00000604599 ZKSCAN1P17029 563 aaPredicted RBP14.64□□□□□ -0.07
CDCA3-212ENST00000604599 HSP90AB2PQ58FF8 381 aa14.64□□□□□ -0.07
CDCA3-212ENST00000604599 TTC21BQ7Z4L5 1316 aa14.63□□□□□ -0.07
CDCA3-212ENST00000604599 POLR3GO15318 223 aaPredicted RBP14.63□□□□□ -0.07
CDCA3-212ENST00000604599 PNMA6AP0CW24 399 aaPredicted RBP14.63□□□□□ -0.07
CDCA3-212ENST00000604599 RAD51AP2Q09MP3 1159 aa14.63□□□□□ -0.07
CDCA3-212ENST00000604599 SNW1Q13573 536 aaKnown RBP14.63□□□□□ -0.07
CDCA3-212ENST00000604599 SLC52A1Q9NWF4 448 aa14.63□□□□□ -0.07
CDCA3-212ENST00000604599 HTATSF1O43719 755 aaKnown RBP14.63□□□□□ -0.07
CDCA3-212ENST00000604599 PDIA4P13667 645 aaKnown RBP14.63□□□□□ -0.07
CDCA3-212ENST00000604599 GORABQ5T7V8 394 aa14.63□□□□□ -0.07
CDCA3-212ENST00000604599 SYT10Q6XYQ8 523 aa14.63□□□□□ -0.07
CDCA3-212ENST00000604599 RUFY2Q8WXA3 655 aa14.63□□□□□ -0.07
CDCA3-212ENST00000604599 TM6SF1Q9BZW5 370 aa14.63□□□□□ -0.07
CDCA3-212ENST00000604599 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
CDCA3-212ENST00000604599 ARHGAP29Q52LW3 1261 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.62□□□□□ -0.07
CDCA3-212ENST00000604599 FEZ2Q9UHY8 353 aaPredicted RBP14.62□□□□□ -0.07
CDCA3-212ENST00000604599 RBM8AQ9Y5S9 174 aaKnown RBP14.62□□□□□ -0.07
CDCA3-212ENST00000604599 ARHGEF10O15013 1369 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 PLA2G4AP47712 749 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 MTHFSDQ2M296 383 aaKnown RBP14.62□□□□□ -0.07
CDCA3-212ENST00000604599 CCDC30Q5VVM6 783 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 FAM193AP78312 1265 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 NECTIN1Q15223 517 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 RNF20Q5VTR2 975 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 CREB3L3Q68CJ9 461 aa14.62□□□□□ -0.07
CDCA3-212ENST00000604599 OS9Q13438 667 aaPredicted RBP14.61□□□□□ -0.07
CDCA3-212ENST00000604599 ERCC4Q92889 916 aaPredicted RBP14.61□□□□□ -0.07
CDCA3-212ENST00000604599 STX1AQ16623 288 aa14.61□□□□□ -0.07
CDCA3-212ENST00000604599 RIMS1Q86UR5 1692 aaKnown RBP14.61□□□□□ -0.07
CDCA3-212ENST00000604599 GLRX3O76003 335 aaKnown RBP14.6□□□□□ -0.07
CDCA3-212ENST00000604599 CAVIN2O95810 425 aa14.6□□□□□ -0.07
CDCA3-212ENST00000604599 E4F1Q66K89 784 aaPredicted RBP14.6□□□□□ -0.07
CDCA3-212ENST00000604599 L2HGDHQ9H9P8 463 aa14.6□□□□□ -0.07
CDCA3-212ENST00000604599 TAF6LQ9Y6J9 622 aa14.6□□□□□ -0.07
CDCA3-212ENST00000604599 TMEM131LA2VDJ0 1609 aa14.6□□□□□ -0.07
CDCA3-212ENST00000604599 WASLO00401 505 aaPredicted RBP14.6□□□□□ -0.07
CDCA3-212ENST00000604599 JAK2O60674 1132 aa14.6□□□□□ -0.07
CDCA3-212ENST00000604599 CERS3Q8IU89 383 aa14.6□□□□□ -0.07
CDCA3-212ENST00000604599 NRKQ7Z2Y5 1582 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 KIF2AO00139 706 aaPredicted RBP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 POLA2Q14181 598 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 DHX40Q8IX18 779 aaKnown RBP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 AOPEPQ8N6M6 819 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 NUDT16Q96DE0 195 aaKnown RBP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 PPP1R13BQ96KQ4 1090 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 DLC1Q96QB1 1528 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 FAM227BQ96M60 508 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 MAP3K19Q56UN5 1328 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 ADCY9O60503 1353 aa14.59□□□□□ -0.07
CDCA3-212ENST00000604599 FAM208AQ9UK61 1670 aaKnown RBP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 NBPF7P0C2Y1 421 aaPredicted RBP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 FTOQ9C0B1 505 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 PHAXQ9H814 394 aaKnown RBP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDCA3-212ENST00000604599 SETD1AO15047 1707 aaKnown RBP14.58□□□□□ -0.08
CDCA3-212ENST00000604599 SEC31AO94979 1220 aaKnown RBP14.58□□□□□ -0.08
CDCA3-212ENST00000604599 FOSBP53539 338 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 ST5P78524 1137 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 KCNB2Q92953 911 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 TSPYL1Q9H0U9 437 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 MAP3K5Q99683 1374 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 MLH3Q9UHC1 1453 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 SLC27A2O14975 620 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 TEX35Q5T0J7 233 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 BRF1Q92994 677 aa14.58□□□□□ -0.08
CDCA3-212ENST00000604599 TOB2Q14106 344 aaPredicted RBP14.57□□□□□ -0.08
CDCA3-212ENST00000604599 NBPF11Q86T75 865 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 H3BQV1 296 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 IFIT2P09913 472 aaKnown RBP14.57□□□□□ -0.08
CDCA3-212ENST00000604599 PSMA5P28066 241 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 CCDC93Q567U6 631 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 IFFO2Q5TF58 517 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 KRBA2Q6ZNG9 492 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 HOMER1Q86YM7 354 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 CCAR1Q8IX12 1150 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms