RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 HS1BP3Q53T59 392 aa15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 EPHA10Q5JZY3 1008 aa15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 VPS53Q5VIR6 699 aa15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 JARID2Q92833 1246 aaPredicted RBP15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 NLRP2Q9NX02 1062 aa15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 NOL7Q9UMY1 257 aaKnown RBP15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 RBM8AQ9Y5S9 174 aaKnown RBP15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 MEGF6O75095 1541 aa15.58■□□□□ 0.09
SRGAP2-209ENST00000604247 GJB2P29033 226 aa15.58■□□□□ 0.08
SRGAP2-209ENST00000604247 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.08
SRGAP2-209ENST00000604247 COPS6Q7L5N1 327 aa15.58■□□□□ 0.08
SRGAP2-209ENST00000604247 KCNB2Q92953 911 aa15.58■□□□□ 0.08
SRGAP2-209ENST00000604247 CYP46A1Q9Y6A2 500 aa15.58■□□□□ 0.08
SRGAP2-209ENST00000604247 F13A1P00488 732 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 XAGE3Q8WTP9 111 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 NEURL1BA8MQ27 555 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 KCNJ4P48050 445 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 ST3GAL1Q11201 340 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 ME3Q16798 604 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 CREB3L3Q68CJ9 461 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 LARP1Q6PKG0 1096 aaKnown RBP15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 NECAB1Q8N987 351 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 TMEM87AQ8NBN3 555 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 MAP4K1Q92918 833 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 TM6SF1Q9BZW5 370 aa15.57■□□□□ 0.08
SRGAP2-209ENST00000604247 COL18A1P39060 1754 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 ADAMTS7Q9UKP4 1686 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 A0A0D9SFI3 127 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 MYD88Q99836 296 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 NPHP3Q7Z494 1330 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 FIBPO43427 364 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 ZKSCAN1P17029 563 aaPredicted RBP15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 GCKRQ14397 625 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 ZNF496Q96IT1 587 aaPredicted RBP15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 USP16Q9Y5T5 823 aa15.56■□□□□ 0.08
SRGAP2-209ENST00000604247 NEXNQ0ZGT2 675 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 EDC3Q96F86 508 aaKnown RBP15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 TPCN1Q9ULQ1 816 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 DCCP43146 1447 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 PHKG2P15735 406 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 TCEANC2Q96MN5 208 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 FSD1Q9BTV5 496 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 MTMR6Q9Y217 621 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 TAF6LQ9Y6J9 622 aa15.55■□□□□ 0.08
SRGAP2-209ENST00000604247 C5P01031 1676 aa15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 SLC27A2O14975 620 aa15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 OFD1O75665 1012 aa15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 PHF14O94880 888 aa15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 DNM1Q05193 864 aaKnown RBP15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 ZSCAN31Q96LW9 406 aaPredicted RBP15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 METTL22Q9BUU2 404 aaPredicted RBP15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 ZKSCAN5Q9Y2L8 839 aa15.54■□□□□ 0.08
SRGAP2-209ENST00000604247 TNS3Q68CZ2 1445 aa15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 HIP1O00291 1037 aa15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 CYP27B1O15528 508 aa15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 UBE2HP62256 183 aa15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 SH2B1Q9NRF2 756 aaPredicted RBP15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 SPATA31A3Q5VYP0 1347 aa15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 TATP17735 454 aaPredicted RBP15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 CCDC183Q5T5S1 534 aa15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 ZNF589Q86UQ0 364 aaPredicted RBP15.53■□□□□ 0.08
SRGAP2-209ENST00000604247 SCN11AQ9UI33 1791 aa15.52■□□□□ 0.08
SRGAP2-209ENST00000604247 VPS37CA5D8V6 355 aaPredicted RBP15.52■□□□□ 0.08
SRGAP2-209ENST00000604247 ZNF500O60304 480 aaPredicted RBP15.52■□□□□ 0.08
SRGAP2-209ENST00000604247 CADPS2Q86UW7 1296 aa15.52■□□□□ 0.08
SRGAP2-209ENST00000604247 ATP6V1DQ9Y5K8 247 aa15.52■□□□□ 0.08
SRGAP2-209ENST00000604247 NDUFB9Q9Y6M9 179 aa15.52■□□□□ 0.08
SRGAP2-209ENST00000604247 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.07
SRGAP2-209ENST00000604247 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.07
SRGAP2-209ENST00000604247 SNRKQ9NRH2 765 aa15.52■□□□□ 0.07
SRGAP2-209ENST00000604247 BRINP3Q76B58 766 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 CCDC39Q9UFE4 941 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 ATP5J2-PTCD1G3V325 749 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 PTCD1O75127 700 aaKnown RBP15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 CHGBP05060 677 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 CSB-PGBD3P0DP91 1061 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 UBE3BQ7Z3V4 1068 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 IFNL2Q8IZJ0 200 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 MPNDQ8N594 471 aa15.51■□□□□ 0.07
SRGAP2-209ENST00000604247 HCLS1P14317 486 aaPredicted RBP15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 TFCP2Q12800 502 aa15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 DBNLQ9UJU6 430 aaKnown RBP15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 XIRP1Q702N8 1843 aaKnown RBP15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 PSMA5P28066 241 aa15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 RFX5P48382 616 aaPredicted RBP15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 PTPN12Q05209 780 aaKnown RBP15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 BLOC1S2Q6QNY1 142 aa15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 COPRSQ9NQ92 184 aa15.5■□□□□ 0.07
SRGAP2-209ENST00000604247 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
SRGAP2-209ENST00000604247 FAM173BQ6P4H8 233 aa15.49■□□□□ 0.07
SRGAP2-209ENST00000604247 GIMAP6Q6P9H5 292 aa15.49■□□□□ 0.07
SRGAP2-209ENST00000604247 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.49■□□□□ 0.07
SRGAP2-209ENST00000604247 FERMT3Q86UX7 667 aa15.49■□□□□ 0.07
SRGAP2-209ENST00000604247 TTC5Q8N0Z6 440 aa15.49■□□□□ 0.07
SRGAP2-209ENST00000604247 PTMAP06454 111 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms