RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 DBF4Q9UBU7 674 aaPredicted RBP23.52■■□□□ 1.36
CCDC12-208ENST00000603885 ANKRD36CQ5JPF3 1778 aa23.51■■□□□ 1.35
CCDC12-208ENST00000603885 GLTPD2A6NH11 291 aa23.51■■□□□ 1.35
CCDC12-208ENST00000603885 RPGRQ92834 1020 aaKnown RBP23.51■■□□□ 1.35
CCDC12-208ENST00000603885 UTP14AQ9BVJ6 771 aaKnown RBP23.51■■□□□ 1.35
CCDC12-208ENST00000603885 MRS2Q9HD23 443 aa23.51■■□□□ 1.35
CCDC12-208ENST00000603885 HSPA6P17066 643 aa23.5■■□□□ 1.35
CCDC12-208ENST00000603885 RRAGCQ9HB90 399 aa23.5■■□□□ 1.35
CCDC12-208ENST00000603885 DICER1Q9UPY3 1922 aaKnown RBP23.5■■□□□ 1.35
CCDC12-208ENST00000603885 CEP350Q5VT06 3117 aa23.5■■□□□ 1.35
CCDC12-208ENST00000603885 RNF123Q5XPI4 1314 aa23.49■■□□□ 1.35
CCDC12-208ENST00000603885 HOXA10P31260 410 aaPredicted RBP23.48■■□□□ 1.35
CCDC12-208ENST00000603885 TCIRG1Q13488 830 aa23.48■■□□□ 1.35
CCDC12-208ENST00000603885 RTKN2Q8IZC4 609 aa23.48■■□□□ 1.35
CCDC12-208ENST00000603885 HYPKQ9NX55 129 aa23.48■■□□□ 1.35
CCDC12-208ENST00000603885 FKBP4Q02790 459 aaKnown RBP eCLIP23.47■■□□□ 1.35
CCDC12-208ENST00000603885 DPY19L2Q6NUT2 758 aa23.47■■□□□ 1.35
CCDC12-208ENST00000603885 NLRP10Q86W26 655 aa23.47■■□□□ 1.35
CCDC12-208ENST00000603885 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
CCDC12-208ENST00000603885 RBM46Q8TBY0 533 aaKnown RBP23.47■■□□□ 1.35
CCDC12-208ENST00000603885 OLFM4Q6UX06 510 aa23.46■■□□□ 1.35
CCDC12-208ENST00000603885 ANKRD13DQ6ZTN6 518 aa23.46■■□□□ 1.35
CCDC12-208ENST00000603885 RBM17Q96I25 401 aaKnown RBP23.46■■□□□ 1.35
CCDC12-208ENST00000603885 NLRP3Q96P20 1036 aa23.46■■□□□ 1.35
CCDC12-208ENST00000603885 ELL2O00472 640 aaPredicted RBP23.45■■□□□ 1.34
CCDC12-208ENST00000603885 CCDC27Q2M243 656 aa23.45■■□□□ 1.34
CCDC12-208ENST00000603885 SLC10A5Q5PT55 438 aa23.45■■□□□ 1.34
CCDC12-208ENST00000603885 CRAMP1Q96RY5 1269 aa23.45■■□□□ 1.34
CCDC12-208ENST00000603885 VEGFAP15692 232 aaPredicted RBP23.44■■□□□ 1.34
CCDC12-208ENST00000603885 CC2D2BQ6DHV5 1058 aa23.44■■□□□ 1.34
CCDC12-208ENST00000603885 C3orf67Q6ZVT6 689 aa23.44■■□□□ 1.34
CCDC12-208ENST00000603885 TRMT112Q9UI30 125 aaKnown RBP23.44■■□□□ 1.34
CCDC12-208ENST00000603885 C8orf58Q8NAV2 365 aa23.43■■□□□ 1.34
CCDC12-208ENST00000603885 CHMP4AQ9BY43 222 aa23.43■■□□□ 1.34
CCDC12-208ENST00000603885 SH3TC1Q8TE82 1336 aa23.42■■□□□ 1.34
CCDC12-208ENST00000603885 WWC1Q8IX03 1113 aa23.42■■□□□ 1.34
CCDC12-208ENST00000603885 ZNF277Q9NRM2 450 aaPredicted RBP23.42■■□□□ 1.34
CCDC12-208ENST00000603885 FSTL1Q12841 308 aa23.41■■□□□ 1.34
CCDC12-208ENST00000603885 NCBP3Q53F19 620 aaKnown RBP23.41■■□□□ 1.34
CCDC12-208ENST00000603885 WDR90Q96KV7 1748 aa23.41■■□□□ 1.34
CCDC12-208ENST00000603885 PPEF1O14829 653 aaPredicted RBP23.4■■□□□ 1.34
CCDC12-208ENST00000603885 GOLGA2Q08379 1002 aa23.4■■□□□ 1.34
CCDC12-208ENST00000603885 GRIPAP1Q4V328 841 aa23.4■■□□□ 1.34
CCDC12-208ENST00000603885 PSMD1Q99460 953 aa23.4■■□□□ 1.34
CCDC12-208ENST00000603885 ISCA1Q9BUE6 129 aa23.4■■□□□ 1.34
CCDC12-208ENST00000603885 SNED1Q8TER0 1413 aa23.4■■□□□ 1.34
CCDC12-208ENST00000603885 HCLS1P14317 486 aaPredicted RBP23.39■■□□□ 1.33
CCDC12-208ENST00000603885 CCDC30Q5VVM6 783 aa23.39■■□□□ 1.33
CCDC12-208ENST00000603885 SYNE4Q8N205 404 aa23.39■■□□□ 1.33
CCDC12-208ENST00000603885 IARSP41252 1262 aaKnown RBP23.38■■□□□ 1.33
CCDC12-208ENST00000603885 APLP1P51693 650 aa23.38■■□□□ 1.33
CCDC12-208ENST00000603885 RIC3Q7Z5B4 369 aa23.38■■□□□ 1.33
CCDC12-208ENST00000603885 SMC1BQ8NDV3 1235 aa23.38■■□□□ 1.33
CCDC12-208ENST00000603885 TSR2Q969E8 191 aaKnown RBP23.38■■□□□ 1.33
CCDC12-208ENST00000603885 TMX4Q9H1E5 349 aaPredicted RBP23.38■■□□□ 1.33
CCDC12-208ENST00000603885 LAMB2P55268 1798 aa23.37■■□□□ 1.33
CCDC12-208ENST00000603885 IL16Q14005 1332 aa23.37■■□□□ 1.33
CCDC12-208ENST00000603885 ATP5J2-PTCD1G3V325 749 aa23.37■■□□□ 1.33
CCDC12-208ENST00000603885 PHAXQ9H814 394 aaKnown RBP23.37■■□□□ 1.33
CCDC12-208ENST00000603885 ABCC4O15439 1325 aa23.36■■□□□ 1.33
CCDC12-208ENST00000603885 POTECB2RU33 542 aa23.36■■□□□ 1.33
CCDC12-208ENST00000603885 TCERG1O14776 1098 aaKnown RBP23.36■■□□□ 1.33
CCDC12-208ENST00000603885 DDNO94850 711 aaPredicted RBP23.36■■□□□ 1.33
CCDC12-208ENST00000603885 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
CCDC12-208ENST00000603885 ZNF428Q96B54 188 aa23.36■■□□□ 1.33
CCDC12-208ENST00000603885 TRIM28Q13263 835 aaKnown RBP23.35■■□□□ 1.33
CCDC12-208ENST00000603885 DDX46Q7L014 1031 aaKnown RBP23.35■■□□□ 1.33
CCDC12-208ENST00000603885 DDX58O95786 925 aaKnown RBP23.34■■□□□ 1.33
CCDC12-208ENST00000603885 JDP2Q8WYK2 163 aa23.34■■□□□ 1.33
CCDC12-208ENST00000603885 FAM89AQ96GI7 184 aa23.34■■□□□ 1.33
CCDC12-208ENST00000603885 ATP6V0A2Q9Y487 856 aa23.34■■□□□ 1.33
CCDC12-208ENST00000603885 BBOX1O75936 387 aa23.33■■□□□ 1.33
CCDC12-208ENST00000603885 ZNF541Q9H0D2 1346 aa23.33■■□□□ 1.32
CCDC12-208ENST00000603885 TWISTNBQ3B726 338 aaPredicted RBP23.32■■□□□ 1.32
CCDC12-208ENST00000603885 SLC51AQ86UW1 340 aa23.32■■□□□ 1.32
CCDC12-208ENST00000603885 STK31Q9BXU1 1019 aa23.32■■□□□ 1.32
CCDC12-208ENST00000603885 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
CCDC12-208ENST00000603885 DDX60Q8IY21 1712 aaKnown RBP23.32■■□□□ 1.32
CCDC12-208ENST00000603885 IQCA1LA6NCM1 817 aa23.31■■□□□ 1.32
CCDC12-208ENST00000603885 FZD9O00144 591 aa23.31■■□□□ 1.32
CCDC12-208ENST00000603885 GRAPQ13588 217 aa23.31■■□□□ 1.32
CCDC12-208ENST00000603885 WDR63Q8IWG1 891 aa23.31■■□□□ 1.32
CCDC12-208ENST00000603885 FAM9BQ8IZU0 186 aa23.31■■□□□ 1.32
CCDC12-208ENST00000603885 GRAPLQ8TC17 118 aaPredicted RBP23.31■■□□□ 1.32
CCDC12-208ENST00000603885 L3MBTL3Q96JM7 780 aaPredicted RBP23.31■■□□□ 1.32
CCDC12-208ENST00000603885 MYD88Q99836 296 aa23.31■■□□□ 1.32
CCDC12-208ENST00000603885 RTL5Q5HYW3 569 aaPredicted RBP23.3■■□□□ 1.32
CCDC12-208ENST00000603885 LARGE2Q8N3Y3 721 aa23.3■■□□□ 1.32
CCDC12-208ENST00000603885 IRS4O14654 1257 aaPredicted RBP23.29■■□□□ 1.32
CCDC12-208ENST00000603885 SF3B3Q15393 1217 aaKnown RBP23.29■■□□□ 1.32
CCDC12-208ENST00000603885 SP8Q8IXZ3 490 aa23.29■■□□□ 1.32
CCDC12-208ENST00000603885 CCDC191Q8NCU4 936 aa23.29■■□□□ 1.32
CCDC12-208ENST00000603885 FANCIQ9NVI1 1328 aa23.29■■□□□ 1.32
CCDC12-208ENST00000603885 SCN4AP35499 1836 aa23.29■■□□□ 1.32
CCDC12-208ENST00000603885 HSP90B1P14625 803 aaKnown RBP23.28■■□□□ 1.32
CCDC12-208ENST00000603885 TMC4Q7Z404 712 aa23.28■■□□□ 1.32
CCDC12-208ENST00000603885 ZBTB38Q8NAP3 1195 aaPredicted RBP23.28■■□□□ 1.32
CCDC12-208ENST00000603885 SUPT20HQ8NEM7 779 aa23.28■■□□□ 1.32
CCDC12-208ENST00000603885 METTL22Q9BUU2 404 aaPredicted RBP23.28■■□□□ 1.32
CCDC12-208ENST00000603885 EIF6P56537 245 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms