RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
PPFIA3-207ENST00000602716 H7C1W4 665 aa21.6■■□□□ 1.05
PPFIA3-207ENST00000602716 PHF14O94880 888 aa21.6■■□□□ 1.05
PPFIA3-207ENST00000602716 NLRP10Q86W26 655 aa21.6■■□□□ 1.05
PPFIA3-207ENST00000602716 SYNE4Q8N205 404 aa21.6■■□□□ 1.05
PPFIA3-207ENST00000602716 POLA2Q14181 598 aa21.6■■□□□ 1.05
PPFIA3-207ENST00000602716 SLC27A3Q5K4L6 730 aa21.6■■□□□ 1.05
PPFIA3-207ENST00000602716 DCTPP1Q9H773 170 aa21.6■■□□□ 1.05
PPFIA3-207ENST00000602716 C4AP0C0L4 1744 aa21.59■■□□□ 1.05
PPFIA3-207ENST00000602716 SRGAP3O43295 1099 aa21.59■■□□□ 1.05
PPFIA3-207ENST00000602716 TRIM28Q13263 835 aaKnown RBP21.59■■□□□ 1.05
PPFIA3-207ENST00000602716 AK7Q96M32 723 aa21.59■■□□□ 1.05
PPFIA3-207ENST00000602716 BCL2L12Q9HB09 334 aa21.59■■□□□ 1.05
PPFIA3-207ENST00000602716 EXOC6BQ9Y2D4 811 aa21.59■■□□□ 1.05
PPFIA3-207ENST00000602716 ZNF34Q8IZ26 560 aa21.58■■□□□ 1.05
PPFIA3-207ENST00000602716 SSH3Q8TE77 659 aa21.58■■□□□ 1.05
PPFIA3-207ENST00000602716 APBB1O00213 710 aa21.58■■□□□ 1.04
PPFIA3-207ENST00000602716 NUCB1Q02818 461 aa21.58■■□□□ 1.04
PPFIA3-207ENST00000602716 MTX1Q13505 466 aa21.58■■□□□ 1.04
PPFIA3-207ENST00000602716 GCC1Q96CN9 775 aa21.58■■□□□ 1.04
PPFIA3-207ENST00000602716 LNPKQ9C0E8 428 aa21.58■■□□□ 1.04
PPFIA3-207ENST00000602716 RTCBQ9Y3I0 505 aaKnown RBP21.58■■□□□ 1.04
PPFIA3-207ENST00000602716 PLSCR1O15162 318 aa21.57■■□□□ 1.04
PPFIA3-207ENST00000602716 HMMRO75330 724 aa21.57■■□□□ 1.04
PPFIA3-207ENST00000602716 FAM89AQ96GI7 184 aa21.57■■□□□ 1.04
PPFIA3-207ENST00000602716 UBR3Q6ZT12 1888 aa21.57■■□□□ 1.04
PPFIA3-207ENST00000602716 ZNF827Q17R98 1081 aa21.56■■□□□ 1.04
PPFIA3-207ENST00000602716 HSP90AB3PQ58FF7 597 aa21.56■■□□□ 1.04
PPFIA3-207ENST00000602716 ARHGEF1Q92888 912 aaKnown RBP21.56■■□□□ 1.04
PPFIA3-207ENST00000602716 DEKP35659 375 aaKnown RBP21.56■■□□□ 1.04
PPFIA3-207ENST00000602716 ANKRD45Q5TZF3 282 aa21.56■■□□□ 1.04
PPFIA3-207ENST00000602716 USPL1Q5W0Q7 1092 aa21.56■■□□□ 1.04
PPFIA3-207ENST00000602716 SMARCA5O60264 1052 aaPredicted RBP21.55■■□□□ 1.04
PPFIA3-207ENST00000602716 FOXO4P98177 505 aa21.55■■□□□ 1.04
PPFIA3-207ENST00000602716 PA2G4Q9UQ80 394 aaKnown RBP21.55■■□□□ 1.04
PPFIA3-207ENST00000602716 FAM177BA6PVY3 158 aa21.55■■□□□ 1.04
PPFIA3-207ENST00000602716 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
PPFIA3-207ENST00000602716 SUSD4Q5VX71 490 aa21.54■■□□□ 1.04
PPFIA3-207ENST00000602716 CHD1LQ86WJ1 897 aa21.54■■□□□ 1.04
PPFIA3-207ENST00000602716 KLHDC4Q8TBB5 520 aa21.54■■□□□ 1.04
PPFIA3-207ENST00000602716 NARFQ9UHQ1 456 aa21.54■■□□□ 1.04
PPFIA3-207ENST00000602716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.53■■□□□ 1.04
PPFIA3-207ENST00000602716 RABL6Q3YEC7 729 aaPredicted RBP21.53■■□□□ 1.04
PPFIA3-207ENST00000602716 ZBTB38Q8NAP3 1195 aaPredicted RBP21.53■■□□□ 1.04
PPFIA3-207ENST00000602716 NIP7Q9Y221 180 aaKnown RBP eCLIP21.53■■□□□ 1.04
PPFIA3-207ENST00000602716 USP42Q9H9J4 1324 aaKnown RBP21.53■■□□□ 1.04
PPFIA3-207ENST00000602716 TBC1D9BQ66K14 1250 aa21.52■■□□□ 1.04
PPFIA3-207ENST00000602716 RGPD3A6NKT7 1758 aaPredicted RBP21.51■■□□□ 1.03
PPFIA3-207ENST00000602716 LMBR1LQ6UX01 489 aa21.51■■□□□ 1.03
PPFIA3-207ENST00000602716 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
PPFIA3-207ENST00000602716 RGPD4Q7Z3J3 1758 aa21.51■■□□□ 1.03
PPFIA3-207ENST00000602716 TRMT112Q9UI30 125 aaKnown RBP21.51■■□□□ 1.03
PPFIA3-207ENST00000602716 EN1Q05925 392 aaPredicted RBP21.51■■□□□ 1.03
PPFIA3-207ENST00000602716 OTUD7AQ8TE49 926 aaPredicted RBP21.51■■□□□ 1.03
PPFIA3-207ENST00000602716 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 NTSR2O95665 410 aa21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 RFX5P48382 616 aaPredicted RBP21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 EZH2Q15910 746 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 ZNF652Q9Y2D9 606 aa21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 TRAPPC3LQ5T215 181 aa21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 C16orf71Q8IYS4 520 aaPredicted RBP21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 AKT1S1Q96B36 256 aa21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 HDAC5Q9UQL6 1122 aa21.5■■□□□ 1.03
PPFIA3-207ENST00000602716 TUBGCP6Q96RT7 1819 aa21.49■■□□□ 1.03
PPFIA3-207ENST00000602716 CDHR2Q9BYE9 1310 aa21.49■■□□□ 1.03
PPFIA3-207ENST00000602716 CLEC4GQ6UXB4 293 aa21.49■■□□□ 1.03
PPFIA3-207ENST00000602716 CCDC85AQ96PX6 553 aaPredicted RBP21.49■■□□□ 1.03
PPFIA3-207ENST00000602716 ZPR1O75312 459 aa21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 CAMKK2Q96RR4 588 aa21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 ANO8Q9HCE9 1232 aaPredicted RBP21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 CHMP3Q9Y3E7 222 aa21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 IRS4O14654 1257 aaPredicted RBP21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 RFC4P35249 363 aa21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 SIL1Q9H173 461 aa21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.48■■□□□ 1.03
PPFIA3-207ENST00000602716 COL24A1Q17RW2 1714 aa21.47■■□□□ 1.03
PPFIA3-207ENST00000602716 SSFA2P28290 1259 aa21.47■■□□□ 1.03
PPFIA3-207ENST00000602716 DEFB132Q7Z7B7 95 aa21.47■■□□□ 1.03
PPFIA3-207ENST00000602716 HCLS1P14317 486 aaPredicted RBP21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 ADRA2BP18089 450 aa21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 FAM161AQ3B820 660 aa21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 PARP10Q53GL7 1025 aa21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 DDRGK1Q96HY6 314 aa21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 UTP14AQ9BVJ6 771 aaKnown RBP21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 PLA2G12BQ9BX93 195 aa21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 PTPN12Q05209 780 aaKnown RBP21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 IL1RAPL2Q9NP60 686 aa21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 ABCC12Q96J65 1359 aa21.46■■□□□ 1.03
PPFIA3-207ENST00000602716 SH3TC1Q8TE82 1336 aa21.45■■□□□ 1.02
PPFIA3-207ENST00000602716 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
PPFIA3-207ENST00000602716 LRRCC1Q9C099 1032 aa21.45■■□□□ 1.02
PPFIA3-207ENST00000602716 TFCP2L1Q9NZI6 479 aa21.45■■□□□ 1.02
PPFIA3-207ENST00000602716 GYS1P13807 737 aa21.44■■□□□ 1.02
PPFIA3-207ENST00000602716 CTSWP56202 376 aa21.44■■□□□ 1.02
PPFIA3-207ENST00000602716 C8orf34Q49A92 452 aa21.44■■□□□ 1.02
PPFIA3-207ENST00000602716 ZNF594Q96JF6 807 aaPredicted RBP21.44■■□□□ 1.02
PPFIA3-207ENST00000602716 RGL2O15211 777 aa21.43■■□□□ 1.02
PPFIA3-207ENST00000602716 RHPN1Q8TCX5 695 aa21.43■■□□□ 1.02
PPFIA3-207ENST00000602716 ERFEQ4G0M1 354 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms