RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 HSPA6P17066 643 aa34.09■■■■□ 3.05
PPFIA3-205ENST00000602509 RIC1Q4ADV7 1423 aa34.07■■■■□ 3.04
PPFIA3-205ENST00000602509 TCIRG1Q13488 830 aa34.07■■■■□ 3.04
PPFIA3-205ENST00000602509 DPY19L2Q6NUT2 758 aa34.07■■■■□ 3.04
PPFIA3-205ENST00000602509 RTKN2Q8IZC4 609 aa34.07■■■■□ 3.04
PPFIA3-205ENST00000602509 HYPKQ9NX55 129 aa34.07■■■■□ 3.04
PPFIA3-205ENST00000602509 NLRP3Q96P20 1036 aa34.06■■■■□ 3.04
PPFIA3-205ENST00000602509 HOXA10P31260 410 aaPredicted RBP34.05■■■■□ 3.04
PPFIA3-205ENST00000602509 RBM17Q96I25 401 aaKnown RBP34.05■■■■□ 3.04
PPFIA3-205ENST00000602509 RNF123Q5XPI4 1314 aa34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 ELL2O00472 640 aaPredicted RBP34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 FKBP4Q02790 459 aaKnown RBP eCLIP34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 OLFM4Q6UX06 510 aa34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 ANKRD13DQ6ZTN6 518 aa34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 NLRP10Q86W26 655 aa34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 PLBD2Q8NHP8 589 aa34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 RBM46Q8TBY0 533 aaKnown RBP34.04■■■■□ 3.04
PPFIA3-205ENST00000602509 ARFGEF2Q9Y6D5 1785 aa34.03■■■■□ 3.04
PPFIA3-205ENST00000602509 TNRC6CQ9HCJ0 1690 aaKnown RBP34.03■■■■□ 3.04
PPFIA3-205ENST00000602509 FER1L6Q2WGJ9 1857 aa34.02■■■■□ 3.04
PPFIA3-205ENST00000602509 SLC10A5Q5PT55 438 aa34.02■■■■□ 3.04
PPFIA3-205ENST00000602509 TRMT112Q9UI30 125 aaKnown RBP34.02■■■■□ 3.04
PPFIA3-205ENST00000602509 VEGFAP15692 232 aaPredicted RBP34.01■■■■□ 3.03
PPFIA3-205ENST00000602509 CRAMP1Q96RY5 1269 aa34.01■■■■□ 3.03
PPFIA3-205ENST00000602509 CACNA1SQ13698 1873 aa34.01■■■■□ 3.03
PPFIA3-205ENST00000602509 CCDC27Q2M243 656 aa34■■■■□ 3.03
PPFIA3-205ENST00000602509 C3orf67Q6ZVT6 689 aa34■■■■□ 3.03
PPFIA3-205ENST00000602509 CHMP4AQ9BY43 222 aa34■■■■□ 3.03
PPFIA3-205ENST00000602509 CC2D2BQ6DHV5 1058 aa33.99■■■■□ 3.03
PPFIA3-205ENST00000602509 C8orf58Q8NAV2 365 aa33.99■■■■□ 3.03
PPFIA3-205ENST00000602509 ZNF277Q9NRM2 450 aaPredicted RBP33.99■■■■□ 3.03
PPFIA3-205ENST00000602509 TIAM2Q8IVF5 1701 aa33.98■■■■□ 3.03
PPFIA3-205ENST00000602509 WWC1Q8IX03 1113 aa33.97■■■■□ 3.03
PPFIA3-205ENST00000602509 SH3TC1Q8TE82 1336 aa33.97■■■■□ 3.03
PPFIA3-205ENST00000602509 PPEF1O14829 653 aaPredicted RBP33.96■■■■□ 3.03
PPFIA3-205ENST00000602509 GOLGA2Q08379 1002 aa33.96■■■■□ 3.03
PPFIA3-205ENST00000602509 FSTL1Q12841 308 aa33.96■■■■□ 3.03
PPFIA3-205ENST00000602509 SYNE4Q8N205 404 aa33.96■■■■□ 3.03
PPFIA3-205ENST00000602509 TMX4Q9H1E5 349 aaPredicted RBP33.96■■■■□ 3.03
PPFIA3-205ENST00000602509 HCLS1P14317 486 aaPredicted RBP33.95■■■■□ 3.03
PPFIA3-205ENST00000602509 CCDC88AQ3V6T2 1871 aa33.95■■■■□ 3.02
PPFIA3-205ENST00000602509 TCERG1O14776 1098 aaKnown RBP33.94■■■■□ 3.02
PPFIA3-205ENST00000602509 GRIPAP1Q4V328 841 aa33.94■■■■□ 3.02
PPFIA3-205ENST00000602509 CCDC30Q5VVM6 783 aa33.94■■■■□ 3.02
PPFIA3-205ENST00000602509 RIC3Q7Z5B4 369 aa33.94■■■■□ 3.02
PPFIA3-205ENST00000602509 TSR2Q969E8 191 aaKnown RBP33.94■■■■□ 3.02
PPFIA3-205ENST00000602509 ATP5J2-PTCD1G3V325 749 aa33.93■■■■□ 3.02
PPFIA3-205ENST00000602509 APLP1P51693 650 aa33.93■■■■□ 3.02
PPFIA3-205ENST00000602509 ZNF428Q96B54 188 aa33.93■■■■□ 3.02
PPFIA3-205ENST00000602509 PSMD1Q99460 953 aa33.93■■■■□ 3.02
PPFIA3-205ENST00000602509 ISCA1Q9BUE6 129 aa33.93■■■■□ 3.02
PPFIA3-205ENST00000602509 IARSP41252 1262 aaKnown RBP33.92■■■■□ 3.02
PPFIA3-205ENST00000602509 NCBP3Q53F19 620 aaKnown RBP33.92■■■■□ 3.02
PPFIA3-205ENST00000602509 DDNO94850 711 aaPredicted RBP33.91■■■■□ 3.02
PPFIA3-205ENST00000602509 SMC1BQ8NDV3 1235 aa33.91■■■■□ 3.02
PPFIA3-205ENST00000602509 PHAXQ9H814 394 aaKnown RBP33.91■■■■□ 3.02
PPFIA3-205ENST00000602509 ABCC4O15439 1325 aa33.89■■■■□ 3.02
PPFIA3-205ENST00000602509 IL16Q14005 1332 aa33.89■■■■□ 3.02
PPFIA3-205ENST00000602509 TSPYL6Q8N831 410 aa33.89■■■■□ 3.02
PPFIA3-205ENST00000602509 ANKRD36CQ5JPF3 1778 aa33.88■■■■□ 3.01
PPFIA3-205ENST00000602509 POTECB2RU33 542 aa33.88■■■■□ 3.01
PPFIA3-205ENST00000602509 DDX46Q7L014 1031 aaKnown RBP33.88■■■■□ 3.01
PPFIA3-205ENST00000602509 FAM89AQ96GI7 184 aa33.88■■■■□ 3.01
PPFIA3-205ENST00000602509 SALL2Q9Y467 1007 aaPredicted RBP33.88■■■■□ 3.01
PPFIA3-205ENST00000602509 DICER1Q9UPY3 1922 aaKnown RBP33.87■■■■□ 3.01
PPFIA3-205ENST00000602509 JDP2Q8WYK2 163 aa33.87■■■■□ 3.01
PPFIA3-205ENST00000602509 BBOX1O75936 387 aa33.86■■■■□ 3.01
PPFIA3-205ENST00000602509 DDX58O95786 925 aaKnown RBP33.86■■■■□ 3.01
PPFIA3-205ENST00000602509 TRIM28Q13263 835 aaKnown RBP33.86■■■■□ 3.01
PPFIA3-205ENST00000602509 ATP6V0A2Q9Y487 856 aa33.86■■■■□ 3.01
PPFIA3-205ENST00000602509 STK31Q9BXU1 1019 aa33.85■■■■□ 3.01
PPFIA3-205ENST00000602509 SNED1Q8TER0 1413 aa33.85■■■■□ 3.01
PPFIA3-205ENST00000602509 FAM9BQ8IZU0 186 aa33.84■■■■□ 3.01
PPFIA3-205ENST00000602509 TWISTNBQ3B726 338 aaPredicted RBP33.83■■■■□ 3.01
PPFIA3-205ENST00000602509 RTL5Q5HYW3 569 aaPredicted RBP33.83■■■■□ 3.01
PPFIA3-205ENST00000602509 WDR90Q96KV7 1748 aa33.83■■■■□ 3.01
PPFIA3-205ENST00000602509 MYD88Q99836 296 aa33.83■■■■□ 3.01
PPFIA3-205ENST00000602509 ZNF541Q9H0D2 1346 aa33.82■■■■□ 3.01
PPFIA3-205ENST00000602509 IQCA1LA6NCM1 817 aa33.82■■■■□ 3
PPFIA3-205ENST00000602509 GRAPQ13588 217 aa33.82■■■■□ 3
PPFIA3-205ENST00000602509 SLC51AQ86UW1 340 aa33.82■■■■□ 3
PPFIA3-205ENST00000602509 GRAPLQ8TC17 118 aaPredicted RBP33.82■■■■□ 3
PPFIA3-205ENST00000602509 FZD9O00144 591 aa33.81■■■■□ 3
PPFIA3-205ENST00000602509 WDR63Q8IWG1 891 aa33.81■■■■□ 3
PPFIA3-205ENST00000602509 LARGE2Q8N3Y3 721 aa33.81■■■■□ 3
PPFIA3-205ENST00000602509 SP8Q8IXZ3 490 aa33.8■■■■□ 3
PPFIA3-205ENST00000602509 L3MBTL3Q96JM7 780 aaPredicted RBP33.8■■■■□ 3
PPFIA3-205ENST00000602509 IRS4O14654 1257 aaPredicted RBP33.79■■■■□ 3
PPFIA3-205ENST00000602509 HSP90B1P14625 803 aaKnown RBP33.78■■■■□ 3
PPFIA3-205ENST00000602509 EIF6P56537 245 aaKnown RBP33.78■■■■□ 3
PPFIA3-205ENST00000602509 ZBTB38Q8NAP3 1195 aaPredicted RBP33.78■■■■□ 3
PPFIA3-205ENST00000602509 CCDC191Q8NCU4 936 aa33.78■■■■□ 3
PPFIA3-205ENST00000602509 SUPT20HQ8NEM7 779 aa33.78■■■■□ 3
PPFIA3-205ENST00000602509 SF3B3Q15393 1217 aaKnown RBP33.77■■■■□ 3
PPFIA3-205ENST00000602509 DPP8Q6V1X1 898 aaPredicted RBP33.77■■■■□ 3
PPFIA3-205ENST00000602509 METTL22Q9BUU2 404 aaPredicted RBP33.77■■■■□ 3
PPFIA3-205ENST00000602509 FANCIQ9NVI1 1328 aa33.77■■■■□ 3
PPFIA3-205ENST00000602509 PPIP5K2O43314 1243 aa33.76■■■□□ 2.99
PPFIA3-205ENST00000602509 TMC4Q7Z404 712 aa33.76■■■□□ 2.99
PPFIA3-205ENST00000602509 MPNDQ8N594 471 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms