RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 HMGB2P26583 209 aaKnown RBP21.83■■□□□ 1.09
DDX49-213ENST00000602113 EN1Q05925 392 aaPredicted RBP21.83■■□□□ 1.09
DDX49-213ENST00000602113 ZNF827Q17R98 1081 aa21.83■■□□□ 1.09
DDX49-213ENST00000602113 EPHA10Q5JZY3 1008 aa21.83■■□□□ 1.09
DDX49-213ENST00000602113 USPL1Q5W0Q7 1092 aa21.83■■□□□ 1.09
DDX49-213ENST00000602113 CLEC4GQ6UXB4 293 aa21.83■■□□□ 1.09
DDX49-213ENST00000602113 BICC1Q9H694 974 aaKnown RBP21.83■■□□□ 1.09
DDX49-213ENST00000602113 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
DDX49-213ENST00000602113 ADRA2BP18089 450 aa21.82■■□□□ 1.08
DDX49-213ENST00000602113 EZH2Q15910 746 aaKnown RBP21.82■■□□□ 1.08
DDX49-213ENST00000602113 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
DDX49-213ENST00000602113 PPP1R42Q7Z4L9 355 aa21.82■■□□□ 1.08
DDX49-213ENST00000602113 AKT1S1Q96B36 256 aa21.82■■□□□ 1.08
DDX49-213ENST00000602113 ZNF652Q9Y2D9 606 aa21.82■■□□□ 1.08
DDX49-213ENST00000602113 PCCAP05165 728 aaPredicted RBP21.82■■□□□ 1.08
DDX49-213ENST00000602113 MTX1Q13505 466 aa21.82■■□□□ 1.08
DDX49-213ENST00000602113 SKAP1Q86WV1 359 aa21.82■■□□□ 1.08
DDX49-213ENST00000602113 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
DDX49-213ENST00000602113 C4AP0C0L4 1744 aa21.81■■□□□ 1.08
DDX49-213ENST00000602113 ZPR1O75312 459 aa21.81■■□□□ 1.08
DDX49-213ENST00000602113 HMMRO75330 724 aa21.81■■□□□ 1.08
DDX49-213ENST00000602113 SSFA2P28290 1259 aa21.81■■□□□ 1.08
DDX49-213ENST00000602113 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
DDX49-213ENST00000602113 SSH3Q8TE77 659 aa21.81■■□□□ 1.08
DDX49-213ENST00000602113 DCTPP1Q9H773 170 aa21.81■■□□□ 1.08
DDX49-213ENST00000602113 RFC4P35249 363 aa21.8■■□□□ 1.08
DDX49-213ENST00000602113 POLA2Q14181 598 aa21.8■■□□□ 1.08
DDX49-213ENST00000602113 FAM89AQ96GI7 184 aa21.8■■□□□ 1.08
DDX49-213ENST00000602113 NIP7Q9Y221 180 aaKnown RBP eCLIP21.8■■□□□ 1.08
DDX49-213ENST00000602113 SUSD4Q5VX71 490 aa21.79■■□□□ 1.08
DDX49-213ENST00000602113 SYNE4Q8N205 404 aa21.79■■□□□ 1.08
DDX49-213ENST00000602113 GCC1Q96CN9 775 aa21.79■■□□□ 1.08
DDX49-213ENST00000602113 SRGAP3O43295 1099 aa21.79■■□□□ 1.08
DDX49-213ENST00000602113 FOXO4P98177 505 aa21.79■■□□□ 1.08
DDX49-213ENST00000602113 SF3B2Q13435 895 aaKnown RBP21.79■■□□□ 1.08
DDX49-213ENST00000602113 TRMT112Q9UI30 125 aaKnown RBP21.79■■□□□ 1.08
DDX49-213ENST00000602113 PDZRN3Q9UPQ7 1066 aa21.79■■□□□ 1.08
DDX49-213ENST00000602113 RABL6Q3YEC7 729 aaPredicted RBP21.78■■□□□ 1.08
DDX49-213ENST00000602113 PARP10Q53GL7 1025 aa21.78■■□□□ 1.08
DDX49-213ENST00000602113 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
DDX49-213ENST00000602113 DEFB132Q7Z7B7 95 aa21.78■■□□□ 1.08
DDX49-213ENST00000602113 BAG6P46379 1132 aa21.77■■□□□ 1.08
DDX49-213ENST00000602113 TFCP2L1Q9NZI6 479 aa21.77■■□□□ 1.08
DDX49-213ENST00000602113 CDHR2Q9BYE9 1310 aa21.76■■□□□ 1.07
DDX49-213ENST00000602113 FAM177BA6PVY3 158 aa21.75■■□□□ 1.07
DDX49-213ENST00000602113 UTP14AQ9BVJ6 771 aaKnown RBP21.75■■□□□ 1.07
DDX49-213ENST00000602113 NTSR2O95665 410 aa21.75■■□□□ 1.07
DDX49-213ENST00000602113 NUCB1Q02818 461 aa21.75■■□□□ 1.07
DDX49-213ENST00000602113 BICDL1Q6ZP65 573 aa21.75■■□□□ 1.07
DDX49-213ENST00000602113 PLA2G12BQ9BX93 195 aa21.75■■□□□ 1.07
DDX49-213ENST00000602113 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
DDX49-213ENST00000602113 ANO8Q9HCE9 1232 aaPredicted RBP21.74■■□□□ 1.07
DDX49-213ENST00000602113 GYS1P13807 737 aa21.73■■□□□ 1.07
DDX49-213ENST00000602113 EXOC6BQ9Y2D4 811 aa21.73■■□□□ 1.07
DDX49-213ENST00000602113 TUBGCP6Q96RT7 1819 aa21.73■■□□□ 1.07
DDX49-213ENST00000602113 SH3TC1Q8TE82 1336 aa21.73■■□□□ 1.07
DDX49-213ENST00000602113 IRS4O14654 1257 aaPredicted RBP21.72■■□□□ 1.07
DDX49-213ENST00000602113 ANKRD45Q5TZF3 282 aa21.72■■□□□ 1.07
DDX49-213ENST00000602113 COL23A1Q86Y22 540 aaPredicted RBP21.72■■□□□ 1.07
DDX49-213ENST00000602113 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
DDX49-213ENST00000602113 SETDB2Q96T68 719 aa21.72■■□□□ 1.07
DDX49-213ENST00000602113 PNPLA7Q6ZV29 1317 aa21.71■■□□□ 1.07
DDX49-213ENST00000602113 RFX5P48382 616 aaPredicted RBP21.71■■□□□ 1.07
DDX49-213ENST00000602113 CHD1LQ86WJ1 897 aa21.71■■□□□ 1.07
DDX49-213ENST00000602113 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
DDX49-213ENST00000602113 APBB1O00213 710 aa21.7■■□□□ 1.06
DDX49-213ENST00000602113 SURF6O75683 361 aaKnown RBP21.7■■□□□ 1.06
DDX49-213ENST00000602113 NFIXQ14938 502 aa21.7■■□□□ 1.06
DDX49-213ENST00000602113 NUTM1Q86Y26 1132 aa21.7■■□□□ 1.06
DDX49-213ENST00000602113 NOP58Q9Y2X3 529 aaKnown RBP21.7■■□□□ 1.06
DDX49-213ENST00000602113 COL24A1Q17RW2 1714 aa21.7■■□□□ 1.06
DDX49-213ENST00000602113 CSF1RP07333 972 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 HCLS1P14317 486 aaPredicted RBP21.69■■□□□ 1.06
DDX49-213ENST00000602113 PDE4AP27815 886 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 SLC15A2Q16348 729 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 LNPKQ9C0E8 428 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 PDE8AO60658 829 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 KLHDC4Q8TBB5 520 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 CHMP3Q9Y3E7 222 aa21.69■■□□□ 1.06
DDX49-213ENST00000602113 RGS3P49796 1198 aa21.68■■□□□ 1.06
DDX49-213ENST00000602113 CTSWP56202 376 aa21.68■■□□□ 1.06
DDX49-213ENST00000602113 ERFEQ4G0M1 354 aa21.68■■□□□ 1.06
DDX49-213ENST00000602113 TTLL11Q8NHH1 800 aa21.68■■□□□ 1.06
DDX49-213ENST00000602113 STK32BQ9NY57 414 aa21.68■■□□□ 1.06
DDX49-213ENST00000602113 SMARCA5O60264 1052 aaPredicted RBP21.67■■□□□ 1.06
DDX49-213ENST00000602113 MSH5O43196 834 aa21.66■■□□□ 1.06
DDX49-213ENST00000602113 TM4SF1P30408 202 aa21.66■■□□□ 1.06
DDX49-213ENST00000602113 PTPN12Q05209 780 aaKnown RBP21.66■■□□□ 1.06
DDX49-213ENST00000602113 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
DDX49-213ENST00000602113 NYXQ9GZU5 481 aa21.66■■□□□ 1.06
DDX49-213ENST00000602113 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
DDX49-213ENST00000602113 RAB11FIP3O75154 756 aa21.66■■□□□ 1.06
DDX49-213ENST00000602113 FAM161AQ3B820 660 aa21.66■■□□□ 1.06
DDX49-213ENST00000602113 CCDC85AQ96PX6 553 aaPredicted RBP21.66■■□□□ 1.06
DDX49-213ENST00000602113 DDX60Q8IY21 1712 aaKnown RBP21.66■■□□□ 1.06
DDX49-213ENST00000602113 CARMIL3Q8ND23 1372 aa21.66■■□□□ 1.06
DDX49-213ENST00000602113 LRRCC1Q9C099 1032 aa21.65■■□□□ 1.06
DDX49-213ENST00000602113 ABCC12Q96J65 1359 aa21.65■■□□□ 1.06
DDX49-213ENST00000602113 HSP90AB4PQ58FF6 505 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms