RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 COL11A2P13942 1736 aaPredicted RBP11.13□□□□□ -0.63
DDX49-211ENST00000601772 CCDC146Q8IYE0 955 aa11.13□□□□□ -0.63
DDX49-211ENST00000601772 PNISRQ8TF01 805 aaKnown RBP11.13□□□□□ -0.63
DDX49-211ENST00000601772 ZBTB1Q9Y2K1 713 aa11.13□□□□□ -0.63
DDX49-211ENST00000601772 COL15A1P39059 1388 aa11.13□□□□□ -0.63
DDX49-211ENST00000601772 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
DDX49-211ENST00000601772 STARD3NLO95772 234 aa11.12□□□□□ -0.63
DDX49-211ENST00000601772 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
DDX49-211ENST00000601772 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
DDX49-211ENST00000601772 THUMPD2Q9BTF0 503 aaKnown RBP11.12□□□□□ -0.63
DDX49-211ENST00000601772 TEX13AQ9BXU3 409 aaPredicted RBP11.12□□□□□ -0.63
DDX49-211ENST00000601772 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
DDX49-211ENST00000601772 CELF2O95319 508 aaKnown RBP11.11□□□□□ -0.63
DDX49-211ENST00000601772 CANXP27824 592 aaKnown RBP11.11□□□□□ -0.63
DDX49-211ENST00000601772 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
DDX49-211ENST00000601772 RIPK4P57078 832 aa11.11□□□□□ -0.63
DDX49-211ENST00000601772 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
DDX49-211ENST00000601772 RUNDC1Q96C34 613 aa11.11□□□□□ -0.63
DDX49-211ENST00000601772 ZNF408Q9H9D4 720 aa11.11□□□□□ -0.63
DDX49-211ENST00000601772 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
DDX49-211ENST00000601772 MIS18AQ9NYP9 233 aa11.11□□□□□ -0.63
DDX49-211ENST00000601772 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
DDX49-211ENST00000601772 PRAMEF22A3QJZ6 481 aa11.1□□□□□ -0.63
DDX49-211ENST00000601772 LMOD1P29536 600 aaPredicted RBP11.1□□□□□ -0.63
DDX49-211ENST00000601772 SOGA3Q5TF21 947 aa11.1□□□□□ -0.63
DDX49-211ENST00000601772 PRPF40BQ6NWY9 871 aaKnown RBP11.1□□□□□ -0.63
DDX49-211ENST00000601772 CTU1Q7Z7A3 348 aaKnown RBP11.1□□□□□ -0.63
DDX49-211ENST00000601772 SAPCD2Q86UD0 394 aa11.1□□□□□ -0.63
DDX49-211ENST00000601772 ZIC5Q96T25 663 aa11.1□□□□□ -0.63
DDX49-211ENST00000601772 RRP7AQ9Y3A4 280 aaKnown RBP11.1□□□□□ -0.63
DDX49-211ENST00000601772 NUP98P52948 1817 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 SLX4Q8IY92 1834 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 A1BGP04217 495 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
DDX49-211ENST00000601772 PDE6BP35913 854 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 GJA3Q9Y6H8 435 aa11.09□□□□□ -0.63
DDX49-211ENST00000601772 NPHP1O15259 732 aa11.08□□□□□ -0.64
DDX49-211ENST00000601772 ANP32AP39687 249 aaKnown RBP11.08□□□□□ -0.64
DDX49-211ENST00000601772 IL6STP40189 918 aaPredicted RBP11.08□□□□□ -0.64
DDX49-211ENST00000601772 EIF5P55010 431 aaKnown RBP11.08□□□□□ -0.64
DDX49-211ENST00000601772 LMOD3Q0VAK6 560 aa11.08□□□□□ -0.64
DDX49-211ENST00000601772 NOGQ13253 232 aa11.08□□□□□ -0.64
DDX49-211ENST00000601772 CNKSR1Q969H4 720 aa11.08□□□□□ -0.64
DDX49-211ENST00000601772 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
DDX49-211ENST00000601772 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
DDX49-211ENST00000601772 A0A0C4DFX4 3053 aa11.07□□□□□ -0.64
DDX49-211ENST00000601772 TRPA1O75762 1119 aa11.07□□□□□ -0.64
DDX49-211ENST00000601772 PIP4K2AP48426 406 aaPredicted RBP11.07□□□□□ -0.64
DDX49-211ENST00000601772 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
DDX49-211ENST00000601772 GPC2Q8N158 579 aa11.07□□□□□ -0.64
DDX49-211ENST00000601772 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
DDX49-211ENST00000601772 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
DDX49-211ENST00000601772 NOP58Q9Y2X3 529 aaKnown RBP11.07□□□□□ -0.64
DDX49-211ENST00000601772 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
DDX49-211ENST00000601772 MKI67P46013 3256 aaKnown RBP11.07□□□□□ -0.64
DDX49-211ENST00000601772 ANKRD36CQ5JPF3 1778 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 A0A087WZG4 1122 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 TCERG1O14776 1098 aaKnown RBP11.06□□□□□ -0.64
DDX49-211ENST00000601772 MS4A1P11836 297 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
DDX49-211ENST00000601772 IRX6P78412 446 aaPredicted RBP11.06□□□□□ -0.64
DDX49-211ENST00000601772 FKBP4Q02790 459 aaKnown RBP eCLIP11.06□□□□□ -0.64
DDX49-211ENST00000601772 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 BRIP1Q9BX63 1249 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 SAGE1Q9NXZ1 904 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
DDX49-211ENST00000601772 EPS15P42566 896 aa11.05□□□□□ -0.64
DDX49-211ENST00000601772 SYNE4Q8N205 404 aa11.05□□□□□ -0.64
DDX49-211ENST00000601772 HHIPL1Q96JK4 782 aa11.05□□□□□ -0.64
DDX49-211ENST00000601772 TSPYL4Q9UJ04 414 aa11.05□□□□□ -0.64
DDX49-211ENST00000601772 TBC1D2BQ9UPU7 963 aa11.05□□□□□ -0.64
DDX49-211ENST00000601772 NBPF26B4DH59 902 aa11.04□□□□□ -0.64
DDX49-211ENST00000601772 FZD9O00144 591 aa11.04□□□□□ -0.64
DDX49-211ENST00000601772 APAF1O14727 1248 aa11.04□□□□□ -0.64
DDX49-211ENST00000601772 STYK1Q6J9G0 422 aa11.04□□□□□ -0.64
DDX49-211ENST00000601772 NBPF10Q6P3W6 841 aaKnown RBP11.04□□□□□ -0.64
DDX49-211ENST00000601772 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
DDX49-211ENST00000601772 GLIS2Q9BZE0 524 aaPredicted RBP11.04□□□□□ -0.64
DDX49-211ENST00000601772 BABAM1Q9NWV8 329 aa11.04□□□□□ -0.64
DDX49-211ENST00000601772 COLQQ9Y215 455 aaPredicted RBP11.04□□□□□ -0.64
DDX49-211ENST00000601772 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
DDX49-211ENST00000601772 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
DDX49-211ENST00000601772 EIF6P56537 245 aaKnown RBP11.03□□□□□ -0.64
DDX49-211ENST00000601772 HUNKP57058 714 aa11.03□□□□□ -0.64
DDX49-211ENST00000601772 PRR5LQ6MZQ0 368 aa11.03□□□□□ -0.64
DDX49-211ENST00000601772 OLFM4Q6UX06 510 aa11.03□□□□□ -0.64
DDX49-211ENST00000601772 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
DDX49-211ENST00000601772 DZIP3Q86Y13 1208 aaKnown RBP11.03□□□□□ -0.64
DDX49-211ENST00000601772 IPO9Q96P70 1041 aaKnown RBP11.03□□□□□ -0.64
DDX49-211ENST00000601772 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
DDX49-211ENST00000601772 HDAC9Q9UKV0 1011 aa11.03□□□□□ -0.64
DDX49-211ENST00000601772 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
DDX49-211ENST00000601772 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
DDX49-211ENST00000601772 SCNN1DP51172 638 aa11.02□□□□□ -0.65
DDX49-211ENST00000601772 TBC1D9BQ66K14 1250 aa11.02□□□□□ -0.65
DDX49-211ENST00000601772 JDP2Q8WYK2 163 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms