RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 TSKSQ9UJT2 592 aa21.54■■□□□ 1.04
SSBP4-211ENST00000601614 GRM1Q13255 1194 aa21.53■■□□□ 1.04
SSBP4-211ENST00000601614 CRY2Q49AN0 593 aa21.53■■□□□ 1.04
SSBP4-211ENST00000601614 JDP2Q8WYK2 163 aa21.53■■□□□ 1.04
SSBP4-211ENST00000601614 RGL2O15211 777 aa21.52■■□□□ 1.04
SSBP4-211ENST00000601614 RGS19P49795 217 aa21.52■■□□□ 1.04
SSBP4-211ENST00000601614 PAXIP1Q6ZW49 1069 aaPredicted RBP21.52■■□□□ 1.04
SSBP4-211ENST00000601614 MCM10Q7L590 875 aa21.52■■□□□ 1.04
SSBP4-211ENST00000601614 NUTM1Q86Y26 1132 aa21.52■■□□□ 1.04
SSBP4-211ENST00000601614 GPR101Q96P66 508 aaPredicted RBP21.52■■□□□ 1.04
SSBP4-211ENST00000601614 EIF6P56537 245 aaKnown RBP21.51■■□□□ 1.03
SSBP4-211ENST00000601614 MLLT1Q03111 559 aaPredicted RBP21.51■■□□□ 1.03
SSBP4-211ENST00000601614 AOC2O75106 756 aa21.5■■□□□ 1.03
SSBP4-211ENST00000601614 DCTN1Q14203 1278 aa21.5■■□□□ 1.03
SSBP4-211ENST00000601614 LMOD1P29536 600 aaPredicted RBP21.49■■□□□ 1.03
SSBP4-211ENST00000601614 ECE1P42892 770 aa21.49■■□□□ 1.03
SSBP4-211ENST00000601614 TLL2Q9Y6L7 1015 aa21.49■■□□□ 1.03
SSBP4-211ENST00000601614 NPC1L1Q9UHC9 1359 aa21.48■■□□□ 1.03
SSBP4-211ENST00000601614 GTF2E1P29083 439 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-211ENST00000601614 RIC1Q4ADV7 1423 aa21.47■■□□□ 1.03
SSBP4-211ENST00000601614 CC2D2BQ6DHV5 1058 aa21.47■■□□□ 1.03
SSBP4-211ENST00000601614 LARGE2Q8N3Y3 721 aa21.47■■□□□ 1.03
SSBP4-211ENST00000601614 BEGAINQ9BUH8 593 aa21.47■■□□□ 1.03
SSBP4-211ENST00000601614 KDM3BQ7LBC6 1761 aa21.46■■□□□ 1.03
SSBP4-211ENST00000601614 HOXA10P31260 410 aaPredicted RBP21.46■■□□□ 1.03
SSBP4-211ENST00000601614 USP50Q70EL3 339 aaPredicted RBP21.46■■□□□ 1.03
SSBP4-211ENST00000601614 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
SSBP4-211ENST00000601614 UBN2Q6ZU65 1347 aa21.45■■□□□ 1.02
SSBP4-211ENST00000601614 TCERG1O14776 1098 aaKnown RBP21.44■■□□□ 1.02
SSBP4-211ENST00000601614 C3orf67Q6ZVT6 689 aa21.44■■□□□ 1.02
SSBP4-211ENST00000601614 NGEFQ8N5V2 710 aa21.44■■□□□ 1.02
SSBP4-211ENST00000601614 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
SSBP4-211ENST00000601614 MAP2K2P36507 400 aa21.43■■□□□ 1.02
SSBP4-211ENST00000601614 TTLL7Q6ZT98 887 aa21.43■■□□□ 1.02
SSBP4-211ENST00000601614 SAPCD2Q86UD0 394 aa21.43■■□□□ 1.02
SSBP4-211ENST00000601614 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
SSBP4-211ENST00000601614 RPGRQ92834 1020 aaKnown RBP21.43■■□□□ 1.02
SSBP4-211ENST00000601614 MCOLN1Q9GZU1 580 aa21.43■■□□□ 1.02
SSBP4-211ENST00000601614 NYXQ9GZU5 481 aa21.43■■□□□ 1.02
SSBP4-211ENST00000601614 GPTP24298 496 aa21.42■■□□□ 1.02
SSBP4-211ENST00000601614 SUSD4Q5VX71 490 aa21.42■■□□□ 1.02
SSBP4-211ENST00000601614 MAP3K15Q6ZN16 1313 aa21.42■■□□□ 1.02
SSBP4-211ENST00000601614 GPRC5DQ9NZD1 345 aa21.42■■□□□ 1.02
SSBP4-211ENST00000601614 IBTKQ9P2D0 1353 aaPredicted RBP21.41■■□□□ 1.02
SSBP4-211ENST00000601614 ERVV-1B6SEH8 477 aa21.41■■□□□ 1.02
SSBP4-211ENST00000601614 PPEF1O14829 653 aaPredicted RBP21.41■■□□□ 1.02
SSBP4-211ENST00000601614 AOC3Q16853 763 aa21.41■■□□□ 1.02
SSBP4-211ENST00000601614 NIM1KQ8IY84 436 aa21.41■■□□□ 1.02
SSBP4-211ENST00000601614 CRAMP1Q96RY5 1269 aa21.41■■□□□ 1.02
SSBP4-211ENST00000601614 GLIS2Q9BZE0 524 aaPredicted RBP21.41■■□□□ 1.02
SSBP4-211ENST00000601614 LAMB2P55268 1798 aa21.41■■□□□ 1.02
SSBP4-211ENST00000601614 PPIP5K2O43314 1243 aa21.4■■□□□ 1.02
SSBP4-211ENST00000601614 CELF2O95319 508 aaKnown RBP21.4■■□□□ 1.02
SSBP4-211ENST00000601614 ADARB2Q9NS39 739 aaKnown RBP21.4■■□□□ 1.02
SSBP4-211ENST00000601614 PDE4DIPQ5VU43 2346 aa21.4■■□□□ 1.02
SSBP4-211ENST00000601614 CXCL9Q07325 125 aa21.39■■□□□ 1.01
SSBP4-211ENST00000601614 TNRC18O15417 2968 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-211ENST00000601614 NTSR2O95665 410 aa21.38■■□□□ 1.01
SSBP4-211ENST00000601614 U2AF1L5P0DN76 240 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-211ENST00000601614 U2AF1Q01081 240 aaKnown RBP eCLIP21.38■■□□□ 1.01
SSBP4-211ENST00000601614 TAF7Q15545 349 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-211ENST00000601614 GRIPAP1Q4V328 841 aa21.38■■□□□ 1.01
SSBP4-211ENST00000601614 RBM17Q96I25 401 aaKnown RBP21.38■■□□□ 1.01
SSBP4-211ENST00000601614 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
SSBP4-211ENST00000601614 ZIC5Q96T25 663 aa21.38■■□□□ 1.01
SSBP4-211ENST00000601614 ZBTB3Q9H5J0 574 aa21.38■■□□□ 1.01
SSBP4-211ENST00000601614 TAF1P21675 1872 aa21.38■■□□□ 1.01
SSBP4-211ENST00000601614 ZNF34Q8IZ26 560 aa21.37■■□□□ 1.01
SSBP4-211ENST00000601614 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
SSBP4-211ENST00000601614 POLR2AP24928 1970 aaKnown RBP21.36■■□□□ 1.01
SSBP4-211ENST00000601614 HTATSF1O43719 755 aaKnown RBP21.36■■□□□ 1.01
SSBP4-211ENST00000601614 GMPSP49915 693 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-211ENST00000601614 HIRAP54198 1017 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-211ENST00000601614 BRPF1P55201 1214 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-211ENST00000601614 CIAPIN1Q6FI81 312 aa21.36■■□□□ 1.01
SSBP4-211ENST00000601614 HHIPL1Q96JK4 782 aa21.36■■□□□ 1.01
SSBP4-211ENST00000601614 CFAP53Q96M91 514 aa21.36■■□□□ 1.01
SSBP4-211ENST00000601614 PGAP2Q9UHJ9 254 aa21.36■■□□□ 1.01
SSBP4-211ENST00000601614 MYL6BP14649 208 aa21.35■■□□□ 1.01
SSBP4-211ENST00000601614 ANKRD36CQ5JPF3 1778 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 SHTN1A0MZ66 631 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 CA12O43570 354 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 DGKZQ13574 1117 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 KIF6Q6ZMV9 814 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 TRPM4Q8TD43 1214 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 ZNF408Q9H9D4 720 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 PCDH10Q9P2E7 1040 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 ZNRF3Q9ULT6 936 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 ATP6V0A2Q9Y487 856 aa21.34■■□□□ 1.01
SSBP4-211ENST00000601614 EIF4A1P60842 406 aaKnown RBP21.33■■□□□ 1.01
SSBP4-211ENST00000601614 DLK2Q6UY11 383 aa21.33■■□□□ 1.01
SSBP4-211ENST00000601614 RTFDC1Q9BY42 306 aaPredicted RBP21.33■■□□□ 1.01
SSBP4-211ENST00000601614 ABCC4O15439 1325 aa21.32■■□□□ 1
SSBP4-211ENST00000601614 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
SSBP4-211ENST00000601614 RAD17O75943 681 aa21.31■■□□□ 1
SSBP4-211ENST00000601614 GIGYF2Q6Y7W6 1299 aaKnown RBP21.31■■□□□ 1
SSBP4-211ENST00000601614 VPS33BQ9H267 617 aa21.31■■□□□ 1
SSBP4-211ENST00000601614 PPP2R1AP30153 589 aa21.3■■□□□ 1
SSBP4-211ENST00000601614 NLRP3Q96P20 1036 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms