RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 NLRP10Q86W26 655 aa27.3■■□□□ 1.96
SNRPA-211ENST00000601545 PLBD2Q8NHP8 589 aa27.3■■□□□ 1.96
SNRPA-211ENST00000601545 NLRP3Q96P20 1036 aa27.3■■□□□ 1.96
SNRPA-211ENST00000601545 IBTKQ9P2D0 1353 aaPredicted RBP27.3■■□□□ 1.96
SNRPA-211ENST00000601545 TOMM70O94826 608 aa27.29■■□□□ 1.96
SNRPA-211ENST00000601545 C3orf67Q6ZVT6 689 aa27.29■■□□□ 1.96
SNRPA-211ENST00000601545 WWC1Q8IX03 1113 aa27.29■■□□□ 1.96
SNRPA-211ENST00000601545 C16orf71Q8IYS4 520 aaPredicted RBP27.29■■□□□ 1.96
SNRPA-211ENST00000601545 ZC3H4Q9UPT8 1303 aaKnown RBP27.29■■□□□ 1.96
SNRPA-211ENST00000601545 SBF1O95248 1867 aa27.29■■□□□ 1.96
SNRPA-211ENST00000601545 LTBP3Q9NS15 1303 aa27.28■■□□□ 1.96
SNRPA-211ENST00000601545 GLTPD2A6NH11 291 aa27.28■■□□□ 1.96
SNRPA-211ENST00000601545 CCDC27Q2M243 656 aa27.28■■□□□ 1.96
SNRPA-211ENST00000601545 SYNE4Q8N205 404 aa27.28■■□□□ 1.96
SNRPA-211ENST00000601545 RBM17Q96I25 401 aaKnown RBP27.28■■□□□ 1.96
SNRPA-211ENST00000601545 TRMT112Q9UI30 125 aaKnown RBP27.28■■□□□ 1.96
SNRPA-211ENST00000601545 SLC10A5Q5PT55 438 aa27.27■■□□□ 1.96
SNRPA-211ENST00000601545 TSR2Q969E8 191 aaKnown RBP27.27■■□□□ 1.96
SNRPA-211ENST00000601545 ATP5J2-PTCD1G3V325 749 aa27.26■■□□□ 1.95
SNRPA-211ENST00000601545 TCERG1O14776 1098 aaKnown RBP27.26■■□□□ 1.95
SNRPA-211ENST00000601545 HOXA10P31260 410 aaPredicted RBP27.26■■□□□ 1.95
SNRPA-211ENST00000601545 DPY19L2Q6NUT2 758 aa27.26■■□□□ 1.95
SNRPA-211ENST00000601545 RTKN2Q8IZC4 609 aa27.26■■□□□ 1.95
SNRPA-211ENST00000601545 PHAXQ9H814 394 aaKnown RBP27.26■■□□□ 1.95
SNRPA-211ENST00000601545 HCLS1P14317 486 aaPredicted RBP27.25■■□□□ 1.95
SNRPA-211ENST00000601545 FAM9BQ8IZU0 186 aa27.25■■□□□ 1.95
SNRPA-211ENST00000601545 TSPYL6Q8N831 410 aa27.25■■□□□ 1.95
SNRPA-211ENST00000601545 FKBP4Q02790 459 aaKnown RBP eCLIP27.24■■□□□ 1.95
SNRPA-211ENST00000601545 RIC3Q7Z5B4 369 aa27.24■■□□□ 1.95
SNRPA-211ENST00000601545 CRAMP1Q96RY5 1269 aa27.24■■□□□ 1.95
SNRPA-211ENST00000601545 ZNF277Q9NRM2 450 aaPredicted RBP27.24■■□□□ 1.95
SNRPA-211ENST00000601545 TNRC6CQ9HCJ0 1690 aaKnown RBP27.22■■□□□ 1.95
SNRPA-211ENST00000601545 HSPA6P17066 643 aa27.22■■□□□ 1.95
SNRPA-211ENST00000601545 CCDC30Q5VVM6 783 aa27.22■■□□□ 1.95
SNRPA-211ENST00000601545 ISCA1Q9BUE6 129 aa27.22■■□□□ 1.95
SNRPA-211ENST00000601545 SH3TC1Q8TE82 1336 aa27.21■■□□□ 1.95
SNRPA-211ENST00000601545 VEGFAP15692 232 aaPredicted RBP27.21■■□□□ 1.95
SNRPA-211ENST00000601545 GOLGA2Q08379 1002 aa27.21■■□□□ 1.95
SNRPA-211ENST00000601545 RIC1Q4ADV7 1423 aa27.21■■□□□ 1.95
SNRPA-211ENST00000601545 CACNA1SQ13698 1873 aa27.21■■□□□ 1.95
SNRPA-211ENST00000601545 RNF123Q5XPI4 1314 aa27.2■■□□□ 1.95
SNRPA-211ENST00000601545 CHMP4AQ9BY43 222 aa27.2■■□□□ 1.94
SNRPA-211ENST00000601545 FER1L6Q2WGJ9 1857 aa27.19■■□□□ 1.94
SNRPA-211ENST00000601545 PPEF1O14829 653 aaPredicted RBP27.19■■□□□ 1.94
SNRPA-211ENST00000601545 CC2D2BQ6DHV5 1058 aa27.19■■□□□ 1.94
SNRPA-211ENST00000601545 RBM46Q8TBY0 533 aaKnown RBP27.19■■□□□ 1.94
SNRPA-211ENST00000601545 FAM89AQ96GI7 184 aa27.19■■□□□ 1.94
SNRPA-211ENST00000601545 DDNO94850 711 aaPredicted RBP27.18■■□□□ 1.94
SNRPA-211ENST00000601545 NCBP3Q53F19 620 aaKnown RBP27.18■■□□□ 1.94
SNRPA-211ENST00000601545 RTL5Q5HYW3 569 aaPredicted RBP27.18■■□□□ 1.94
SNRPA-211ENST00000601545 CCDC88AQ3V6T2 1871 aa27.18■■□□□ 1.94
SNRPA-211ENST00000601545 SLC51AQ86UW1 340 aa27.17■■□□□ 1.94
SNRPA-211ENST00000601545 TMX4Q9H1E5 349 aaPredicted RBP27.17■■□□□ 1.94
SNRPA-211ENST00000601545 IL16Q14005 1332 aa27.16■■□□□ 1.94
SNRPA-211ENST00000601545 IARSP41252 1262 aaKnown RBP27.16■■□□□ 1.94
SNRPA-211ENST00000601545 TWISTNBQ3B726 338 aaPredicted RBP27.16■■□□□ 1.94
SNRPA-211ENST00000601545 MYD88Q99836 296 aa27.16■■□□□ 1.94
SNRPA-211ENST00000601545 DDX46Q7L014 1031 aaKnown RBP27.15■■□□□ 1.94
SNRPA-211ENST00000601545 WDR63Q8IWG1 891 aa27.15■■□□□ 1.94
SNRPA-211ENST00000601545 PSMD1Q99460 953 aa27.15■■□□□ 1.94
SNRPA-211ENST00000601545 ABCC4O15439 1325 aa27.15■■□□□ 1.94
SNRPA-211ENST00000601545 ARFGEF2Q9Y6D5 1785 aa27.14■■□□□ 1.94
SNRPA-211ENST00000601545 POTECB2RU33 542 aa27.14■■□□□ 1.94
SNRPA-211ENST00000601545 TRIM28Q13263 835 aaKnown RBP27.14■■□□□ 1.94
SNRPA-211ENST00000601545 STK31Q9BXU1 1019 aa27.14■■□□□ 1.94
SNRPA-211ENST00000601545 BBOX1O75936 387 aa27.13■■□□□ 1.93
SNRPA-211ENST00000601545 DDX58O95786 925 aaKnown RBP27.13■■□□□ 1.93
SNRPA-211ENST00000601545 ATP6V0A2Q9Y487 856 aa27.13■■□□□ 1.93
SNRPA-211ENST00000601545 GRIPAP1Q4V328 841 aa27.12■■□□□ 1.93
SNRPA-211ENST00000601545 FSTL1Q12841 308 aa27.11■■□□□ 1.93
SNRPA-211ENST00000601545 JDP2Q8WYK2 163 aa27.11■■□□□ 1.93
SNRPA-211ENST00000601545 MAP3K2Q9Y2U5 619 aa27.11■■□□□ 1.93
SNRPA-211ENST00000601545 IRS4O14654 1257 aaPredicted RBP27.1■■□□□ 1.93
SNRPA-211ENST00000601545 SLC4A2P04920 1241 aa27.1■■□□□ 1.93
SNRPA-211ENST00000601545 SMC1BQ8NDV3 1235 aa27.1■■□□□ 1.93
SNRPA-211ENST00000601545 METTL22Q9BUU2 404 aaPredicted RBP27.1■■□□□ 1.93
SNRPA-211ENST00000601545 FANCIQ9NVI1 1328 aa27.1■■□□□ 1.93
SNRPA-211ENST00000601545 TIAM2Q8IVF5 1701 aa27.1■■□□□ 1.93
SNRPA-211ENST00000601545 GRAPQ13588 217 aa27.09■■□□□ 1.93
SNRPA-211ENST00000601545 SP8Q8IXZ3 490 aa27.09■■□□□ 1.93
SNRPA-211ENST00000601545 GRAPLQ8TC17 118 aaPredicted RBP27.09■■□□□ 1.93
SNRPA-211ENST00000601545 JARID2Q92833 1246 aaPredicted RBP27.09■■□□□ 1.93
SNRPA-211ENST00000601545 ANKRD36CQ5JPF3 1778 aa27.09■■□□□ 1.93
SNRPA-211ENST00000601545 APLP1P51693 650 aa27.08■■□□□ 1.93
SNRPA-211ENST00000601545 EXOSC9Q06265 439 aaKnown RBP27.08■■□□□ 1.93
SNRPA-211ENST00000601545 KSR2Q6VAB6 950 aa27.08■■□□□ 1.93
SNRPA-211ENST00000601545 G2E3Q7L622 706 aa27.08■■□□□ 1.93
SNRPA-211ENST00000601545 LARGE2Q8N3Y3 721 aa27.08■■□□□ 1.93
SNRPA-211ENST00000601545 ZBTB38Q8NAP3 1195 aaPredicted RBP27.08■■□□□ 1.93
SNRPA-211ENST00000601545 ZNF541Q9H0D2 1346 aa27.08■■□□□ 1.93
SNRPA-211ENST00000601545 PI4KAP2A4QPH2 592 aa27.07■■□□□ 1.92
SNRPA-211ENST00000601545 SF3B3Q15393 1217 aaKnown RBP27.07■■□□□ 1.92
SNRPA-211ENST00000601545 PI4KAP1Q8N8J0 262 aa27.07■■□□□ 1.92
SNRPA-211ENST00000601545 CCDC191Q8NCU4 936 aa27.07■■□□□ 1.92
SNRPA-211ENST00000601545 SPINK5Q9NQ38 1064 aaPredicted RBP27.07■■□□□ 1.92
SNRPA-211ENST00000601545 CWC25Q9NXE8 425 aaPredicted RBP27.07■■□□□ 1.92
SNRPA-211ENST00000601545 SNED1Q8TER0 1413 aa27.07■■□□□ 1.92
SNRPA-211ENST00000601545 FZD9O00144 591 aa27.06■■□□□ 1.92
SNRPA-211ENST00000601545 MPNDQ8N594 471 aa27.06■■□□□ 1.92
SNRPA-211ENST00000601545 DICER1Q9UPY3 1922 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms