RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 GPR162Q16538 588 aa13.05□□□□□ -0.32
ZNF558-207ENST00000601372 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 PIBF1Q8WXW3 757 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 UBAC1Q9BSL1 405 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 NSFL1CQ9UNZ2 370 aaKnown RBP13.04□□□□□ -0.32
ZNF558-207ENST00000601372 ARHGAP31Q2M1Z3 1444 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 SYNMO15061 1565 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 H0YIN7 160 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
ZNF558-207ENST00000601372 HSPA1LP34931 641 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
ZNF558-207ENST00000601372 PTPRTO14522 1441 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 OGFOD1Q8N543 542 aa13.04□□□□□ -0.32
ZNF558-207ENST00000601372 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 TNMDQ9H2S6 317 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 BCORL1Q5H9F3 1711 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 SDSP20132 328 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
ZNF558-207ENST00000601372 UNC13BO14795 1591 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 A1BGP04217 495 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 UQCRHLA0A096LP55 91 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 UQCRHP07919 91 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 TPM2P07951 284 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
ZNF558-207ENST00000601372 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
ZNF558-207ENST00000601372 GRM8O00222 908 aa13.02□□□□□ -0.32
ZNF558-207ENST00000601372 SNRKQ9NRH2 765 aa13.02□□□□□ -0.32
ZNF558-207ENST00000601372 SMC2O95347 1197 aa13.02□□□□□ -0.32
ZNF558-207ENST00000601372 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.32
ZNF558-207ENST00000601372 FERMT3Q86UX7 667 aa13.02□□□□□ -0.32
ZNF558-207ENST00000601372 E9PCH4 1651 aa13.02□□□□□ -0.33
ZNF558-207ENST00000601372 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
ZNF558-207ENST00000601372 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.33
ZNF558-207ENST00000601372 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
ZNF558-207ENST00000601372 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.33
ZNF558-207ENST00000601372 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
ZNF558-207ENST00000601372 ATP2B1P20020 1258 aa13.01□□□□□ -0.33
ZNF558-207ENST00000601372 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
ZNF558-207ENST00000601372 ERVV-2B6SEH9 535 aa13.01□□□□□ -0.33
ZNF558-207ENST00000601372 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
ZNF558-207ENST00000601372 PDILTQ8N807 584 aa13.01□□□□□ -0.33
ZNF558-207ENST00000601372 CCDC47Q96A33 483 aaKnown RBP13.01□□□□□ -0.33
ZNF558-207ENST00000601372 CWF19L2Q2TBE0 894 aaKnown RBP13.01□□□□□ -0.33
ZNF558-207ENST00000601372 NAPBQ9H115 298 aa13.01□□□□□ -0.33
ZNF558-207ENST00000601372 MYCNP04198 464 aaPredicted RBP13.01□□□□□ -0.33
ZNF558-207ENST00000601372 BLOC1S2Q6QNY1 142 aa13.01□□□□□ -0.33
ZNF558-207ENST00000601372 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
ZNF558-207ENST00000601372 USP6P35125 1406 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 PHKG2P15735 406 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 SPATA32Q96LK8 384 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 VEZTQ9HBM0 779 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
ZNF558-207ENST00000601372 BAG3O95817 575 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 SOGA3Q5TF21 947 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 KIDINS220Q9ULH0 1771 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 GOLIM4O00461 696 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 CCDC192P0DO97 292 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
ZNF558-207ENST00000601372 TPM3P06753 285 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
ZNF558-207ENST00000601372 NOC3LQ8WTT2 800 aaKnown RBP13□□□□□ -0.33
ZNF558-207ENST00000601372 VAMP4O75379 141 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 LDHCP07864 332 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-207ENST00000601372 EYA3Q99504 573 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 FEZ1Q99689 392 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 INO80Q9ULG1 1556 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-207ENST00000601372 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
ZNF558-207ENST00000601372 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 GSTO1P78417 241 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-207ENST00000601372 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-207ENST00000601372 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 KRT85P78386 507 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 PDE4CQ08493 712 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 PHAXQ9H814 394 aaKnown RBP12.99□□□□□ -0.33
ZNF558-207ENST00000601372 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 BCS1LQ9Y276 419 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 PDCP20941 246 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
ZNF558-207ENST00000601372 XRCC6P12956 609 aaKnown RBP eCLIP12.98□□□□□ -0.33
ZNF558-207ENST00000601372 PCMTD1Q96MG8 357 aaPredicted RBP12.98□□□□□ -0.33
ZNF558-207ENST00000601372 ATP7BP35670 1465 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
ZNF558-207ENST00000601372 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms