RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 DCTPP1Q9H773 170 aa14.46□□□□□ -0.09
VRK3-223ENST00000601341 ZNF652Q9Y2D9 606 aa14.46□□□□□ -0.09
VRK3-223ENST00000601341 MTX1Q13505 466 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 CLEC4GQ6UXB4 293 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 PNMA6EA0A0J9YXQ4 647 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 SRGAP3O43295 1099 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 NFKBIBQ15653 356 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 PPP1R42Q7Z4L9 355 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 NLRP10Q86W26 655 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 ZNF34Q8IZ26 560 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 PROM2Q8N271 834 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 SSH3Q8TE77 659 aa14.45□□□□□ -0.1
VRK3-223ENST00000601341 ADRA2BP18089 450 aa14.44□□□□□ -0.1
VRK3-223ENST00000601341 GPTP24298 496 aa14.44□□□□□ -0.1
VRK3-223ENST00000601341 CASP7P55210 303 aa14.44□□□□□ -0.1
VRK3-223ENST00000601341 NUCB1Q02818 461 aa14.44□□□□□ -0.1
VRK3-223ENST00000601341 KAZALD1Q96I82 304 aa14.44□□□□□ -0.1
VRK3-223ENST00000601341 EIF5BO60841 1220 aaKnown RBP14.43□□□□□ -0.1
VRK3-223ENST00000601341 ZPR1O75312 459 aa14.43□□□□□ -0.1
VRK3-223ENST00000601341 PCCAP05165 728 aaPredicted RBP14.43□□□□□ -0.1
VRK3-223ENST00000601341 POLA2Q14181 598 aa14.43□□□□□ -0.1
VRK3-223ENST00000601341 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
VRK3-223ENST00000601341 TRAPPC3LQ5T215 181 aa14.43□□□□□ -0.1
VRK3-223ENST00000601341 ZBTB38Q8NAP3 1195 aaPredicted RBP14.43□□□□□ -0.1
VRK3-223ENST00000601341 JARID2Q92833 1246 aaPredicted RBP14.43□□□□□ -0.1
VRK3-223ENST00000601341 BCL11AQ9H165 835 aa14.43□□□□□ -0.1
VRK3-223ENST00000601341 BICC1Q9H694 974 aaKnown RBP14.43□□□□□ -0.1
VRK3-223ENST00000601341 NARFQ9UHQ1 456 aa14.43□□□□□ -0.1
VRK3-223ENST00000601341 C4BP0C0L5 1744 aa14.43□□□□□ -0.1
VRK3-223ENST00000601341 SEC24BO95487 1268 aa14.42□□□□□ -0.1
VRK3-223ENST00000601341 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
VRK3-223ENST00000601341 RFC4P35249 363 aa14.42□□□□□ -0.1
VRK3-223ENST00000601341 ANKRD45Q5TZF3 282 aa14.42□□□□□ -0.1
VRK3-223ENST00000601341 TAF1LQ8IZX4 1826 aa14.41□□□□□ -0.1
VRK3-223ENST00000601341 SSFA2P28290 1259 aa14.41□□□□□ -0.1
VRK3-223ENST00000601341 CHD1LQ86WJ1 897 aa14.41□□□□□ -0.1
VRK3-223ENST00000601341 TRMT112Q9UI30 125 aaKnown RBP14.41□□□□□ -0.1
VRK3-223ENST00000601341 NIP7Q9Y221 180 aaKnown RBP eCLIP14.41□□□□□ -0.1
VRK3-223ENST00000601341 AFDNP55196 1824 aaKnown RBP14.41□□□□□ -0.1
VRK3-223ENST00000601341 UBN2Q6ZU65 1347 aa14.4□□□□□ -0.1
VRK3-223ENST00000601341 PHF14O94880 888 aa14.4□□□□□ -0.1
VRK3-223ENST00000601341 RABL6Q3YEC7 729 aaPredicted RBP14.4□□□□□ -0.1
VRK3-223ENST00000601341 EPHA10Q5JZY3 1008 aa14.4□□□□□ -0.1
VRK3-223ENST00000601341 USPL1Q5W0Q7 1092 aa14.4□□□□□ -0.1
VRK3-223ENST00000601341 SMIM5Q71RC9 77 aa14.4□□□□□ -0.1
VRK3-223ENST00000601341 FAM89AQ96GI7 184 aa14.4□□□□□ -0.1
VRK3-223ENST00000601341 CDHR2Q9BYE9 1310 aa14.4□□□□□ -0.1
VRK3-223ENST00000601341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.39□□□□□ -0.11
VRK3-223ENST00000601341 SF3B2Q13435 895 aaKnown RBP14.39□□□□□ -0.11
VRK3-223ENST00000601341 HSP90AB4PQ58FF6 505 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 AMIGO3Q86WK7 504 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 SURF6O75683 361 aaKnown RBP14.39□□□□□ -0.11
VRK3-223ENST00000601341 FOXO4P98177 505 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 BMP2KLQ5H9B9 411 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 SUSD4Q5VX71 490 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 UTP14AQ9BVJ6 771 aaKnown RBP14.39□□□□□ -0.11
VRK3-223ENST00000601341 PLA2G12BQ9BX93 195 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 BCL2L12Q9HB09 334 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 SRP68Q9UHB9 627 aaKnown RBP14.39□□□□□ -0.11
VRK3-223ENST00000601341 EXOC6BQ9Y2D4 811 aa14.39□□□□□ -0.11
VRK3-223ENST00000601341 USP42Q9H9J4 1324 aaKnown RBP14.38□□□□□ -0.11
VRK3-223ENST00000601341 NUP98P52948 1817 aa14.38□□□□□ -0.11
VRK3-223ENST00000601341 RAB11FIP3O75154 756 aa14.38□□□□□ -0.11
VRK3-223ENST00000601341 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
VRK3-223ENST00000601341 LMBR1LQ6UX01 489 aa14.38□□□□□ -0.11
VRK3-223ENST00000601341 LNPKQ9C0E8 428 aa14.38□□□□□ -0.11
VRK3-223ENST00000601341 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
VRK3-223ENST00000601341 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
VRK3-223ENST00000601341 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
VRK3-223ENST00000601341 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
VRK3-223ENST00000601341 TNS1Q9HBL0 1735 aaKnown RBP14.37□□□□□ -0.11
VRK3-223ENST00000601341 APBB1O00213 710 aa14.37□□□□□ -0.11
VRK3-223ENST00000601341 IRS4O14654 1257 aaPredicted RBP14.37□□□□□ -0.11
VRK3-223ENST00000601341 GSE1Q14687 1217 aa14.37□□□□□ -0.11
VRK3-223ENST00000601341 CAMKK2Q96RR4 588 aa14.37□□□□□ -0.11
VRK3-223ENST00000601341 SETDB2Q96T68 719 aa14.37□□□□□ -0.11
VRK3-223ENST00000601341 LRRCC1Q9C099 1032 aa14.37□□□□□ -0.11
VRK3-223ENST00000601341 ANKRD36CQ5JPF3 1778 aa14.36□□□□□ -0.11
VRK3-223ENST00000601341 BAG6P46379 1132 aa14.36□□□□□ -0.11
VRK3-223ENST00000601341 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
VRK3-223ENST00000601341 TBC1D9BQ66K14 1250 aa14.36□□□□□ -0.11
VRK3-223ENST00000601341 FLAD1Q8NFF5 587 aa14.36□□□□□ -0.11
VRK3-223ENST00000601341 C22orf23Q9BZE7 217 aa14.36□□□□□ -0.11
VRK3-223ENST00000601341 CHMP3Q9Y3E7 222 aa14.36□□□□□ -0.11
VRK3-223ENST00000601341 RGPD3A6NKT7 1758 aaPredicted RBP14.35□□□□□ -0.11
VRK3-223ENST00000601341 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 RGPD4Q7Z3J3 1758 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 FAM177BA6PVY3 158 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 PDE8AO60658 829 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 NTSR2O95665 410 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 RBM25P49756 843 aaKnown RBP14.35□□□□□ -0.11
VRK3-223ENST00000601341 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
VRK3-223ENST00000601341 BICDL1Q6ZP65 573 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 SYNE4Q8N205 404 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 ANTXR1Q9H6X2 564 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 COPRSQ9NQ92 184 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
VRK3-223ENST00000601341 CSF1RP07333 972 aa14.34□□□□□ -0.11
VRK3-223ENST00000601341 G3BP1Q13283 466 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms