RNA–Protein interactions for RNA: ENST00000600898.1

USF2-214, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-214ENST00000600898 SUCLG2Q96I99 432 aa19.32■□□□□ 0.68
USF2-214ENST00000600898 PPP4R2Q9NY27 417 aa19.32■□□□□ 0.68
USF2-214ENST00000600898 LRRFIP2Q9Y608 721 aaKnown RBP19.32■□□□□ 0.68
USF2-214ENST00000600898 GRM8O00222 908 aa19.31■□□□□ 0.68
USF2-214ENST00000600898 IGHDP01880 384 aa19.31■□□□□ 0.68
USF2-214ENST00000600898 GYS1P13807 737 aa19.31■□□□□ 0.68
USF2-214ENST00000600898 RFC4P35249 363 aa19.31■□□□□ 0.68
USF2-214ENST00000600898 TRIM28Q13263 835 aaKnown RBP19.31■□□□□ 0.68
USF2-214ENST00000600898 BICDL1Q6ZP65 573 aa19.31■□□□□ 0.68
USF2-214ENST00000600898 FAM177BA6PVY3 158 aa19.3■□□□□ 0.68
USF2-214ENST00000600898 H7C1W4 665 aa19.3■□□□□ 0.68
USF2-214ENST00000600898 ADRA2BP18089 450 aa19.3■□□□□ 0.68
USF2-214ENST00000600898 UBE3BQ7Z3V4 1068 aa19.3■□□□□ 0.68
USF2-214ENST00000600898 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
USF2-214ENST00000600898 CWC25Q9NXE8 425 aaPredicted RBP19.3■□□□□ 0.68
USF2-214ENST00000600898 ZPR1O75312 459 aa19.29■□□□□ 0.68
USF2-214ENST00000600898 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
USF2-214ENST00000600898 C9orf78Q9NZ63 289 aaPredicted RBP19.29■□□□□ 0.68
USF2-214ENST00000600898 NIP7Q9Y221 180 aaKnown RBP eCLIP19.29■□□□□ 0.68
USF2-214ENST00000600898 FAM89AQ96GI7 184 aa19.28■□□□□ 0.68
USF2-214ENST00000600898 STK32BQ9NY57 414 aa19.28■□□□□ 0.68
USF2-214ENST00000600898 IBTKQ9P2D0 1353 aaPredicted RBP19.28■□□□□ 0.68
USF2-214ENST00000600898 COL24A1Q17RW2 1714 aa19.28■□□□□ 0.68
USF2-214ENST00000600898 QSER1Q2KHR3 1735 aa19.28■□□□□ 0.68
USF2-214ENST00000600898 UBTFL1P0CB47 393 aaPredicted RBP19.27■□□□□ 0.68
USF2-214ENST00000600898 NFIXQ14938 502 aa19.27■□□□□ 0.68
USF2-214ENST00000600898 HSP90AB3PQ58FF7 597 aa19.27■□□□□ 0.68
USF2-214ENST00000600898 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
USF2-214ENST00000600898 CLEC4GQ6UXB4 293 aa19.27■□□□□ 0.68
USF2-214ENST00000600898 ANKRD44Q8N8A2 993 aa19.27■□□□□ 0.68
USF2-214ENST00000600898 NTSR2O95665 410 aa19.26■□□□□ 0.67
USF2-214ENST00000600898 GNAI2P04899 355 aa19.26■□□□□ 0.67
USF2-214ENST00000600898 GNAI3P08754 354 aa19.26■□□□□ 0.67
USF2-214ENST00000600898 CCDC24Q8N4L8 307 aa19.26■□□□□ 0.67
USF2-214ENST00000600898 PNMA6EA0A0J9YXQ4 647 aa19.25■□□□□ 0.67
USF2-214ENST00000600898 MSH5O43196 834 aa19.25■□□□□ 0.67
USF2-214ENST00000600898 PCCAP05165 728 aaPredicted RBP19.25■□□□□ 0.67
USF2-214ENST00000600898 FOXO4P98177 505 aa19.25■□□□□ 0.67
USF2-214ENST00000600898 DDR1Q08345 913 aa19.25■□□□□ 0.67
USF2-214ENST00000600898 MSL1Q68DK7 614 aa19.25■□□□□ 0.67
USF2-214ENST00000600898 NUTM1Q86Y26 1132 aa19.25■□□□□ 0.67
USF2-214ENST00000600898 BICC1Q9H694 974 aaKnown RBP19.25■□□□□ 0.67
USF2-214ENST00000600898 TM4SF1P30408 202 aa19.24■□□□□ 0.67
USF2-214ENST00000600898 ZNF652Q9Y2D9 606 aa19.24■□□□□ 0.67
USF2-214ENST00000600898 DDX60Q8IY21 1712 aaKnown RBP19.24■□□□□ 0.67
USF2-214ENST00000600898 RGL2O15211 777 aa19.23■□□□□ 0.67
USF2-214ENST00000600898 C3orf67Q6ZVT6 689 aa19.23■□□□□ 0.67
USF2-214ENST00000600898 SKAP1Q86WV1 359 aa19.23■□□□□ 0.67
USF2-214ENST00000600898 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
USF2-214ENST00000600898 ZBTB38Q8NAP3 1195 aaPredicted RBP19.23■□□□□ 0.67
USF2-214ENST00000600898 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
USF2-214ENST00000600898 TRMT112Q9UI30 125 aaKnown RBP19.23■□□□□ 0.67
USF2-214ENST00000600898 KDM2BQ8NHM5 1336 aa19.23■□□□□ 0.67
USF2-214ENST00000600898 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
USF2-214ENST00000600898 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
USF2-214ENST00000600898 ATP8B2P98198 1209 aa19.22■□□□□ 0.67
USF2-214ENST00000600898 ERFEQ4G0M1 354 aa19.22■□□□□ 0.67
USF2-214ENST00000600898 UTP14AQ9BVJ6 771 aaKnown RBP19.22■□□□□ 0.67
USF2-214ENST00000600898 COL4A1P02462 1669 aa19.21■□□□□ 0.67
USF2-214ENST00000600898 AAMPQ13685 434 aa19.21■□□□□ 0.67
USF2-214ENST00000600898 PARP10Q53GL7 1025 aa19.21■□□□□ 0.67
USF2-214ENST00000600898 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
USF2-214ENST00000600898 CASZ1Q86V15 1759 aa19.21■□□□□ 0.67
USF2-214ENST00000600898 SETDB2Q96T68 719 aa19.2■□□□□ 0.66
USF2-214ENST00000600898 CDHR2Q9BYE9 1310 aa19.2■□□□□ 0.66
USF2-214ENST00000600898 POLRMTO00411 1230 aaKnown RBP19.19■□□□□ 0.66
USF2-214ENST00000600898 IRS4O14654 1257 aaPredicted RBP19.19■□□□□ 0.66
USF2-214ENST00000600898 POLA2Q14181 598 aa19.19■□□□□ 0.66
USF2-214ENST00000600898 FLAD1Q8NFF5 587 aa19.19■□□□□ 0.66
USF2-214ENST00000600898 CCDC85AQ96PX6 553 aaPredicted RBP19.19■□□□□ 0.66
USF2-214ENST00000600898 CHMP4BQ9H444 224 aaKnown RBP19.19■□□□□ 0.66
USF2-214ENST00000600898 TNRC6CQ9HCJ0 1690 aaKnown RBP19.19■□□□□ 0.66
USF2-214ENST00000600898 HDAC1Q13547 482 aaPredicted RBP19.18■□□□□ 0.66
USF2-214ENST00000600898 RABL6Q3YEC7 729 aaPredicted RBP19.18■□□□□ 0.66
USF2-214ENST00000600898 LMBR1LQ6UX01 489 aa19.18■□□□□ 0.66
USF2-214ENST00000600898 RPAP2Q8IXW5 612 aaPredicted RBP19.18■□□□□ 0.66
USF2-214ENST00000600898 PLA2G12BQ9BX93 195 aa19.18■□□□□ 0.66
USF2-214ENST00000600898 LAMB2P55268 1798 aa19.18■□□□□ 0.66
USF2-214ENST00000600898 SH3TC1Q8TE82 1336 aa19.18■□□□□ 0.66
USF2-214ENST00000600898 CARMIL3Q8ND23 1372 aa19.18■□□□□ 0.66
USF2-214ENST00000600898 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
USF2-214ENST00000600898 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
USF2-214ENST00000600898 MTX1Q13505 466 aa19.17■□□□□ 0.66
USF2-214ENST00000600898 NBPF5PQ86XG9 351 aaPredicted RBP19.17■□□□□ 0.66
USF2-214ENST00000600898 KLHDC4Q8TBB5 520 aa19.17■□□□□ 0.66
USF2-214ENST00000600898 SSH3Q8TE77 659 aa19.17■□□□□ 0.66
USF2-214ENST00000600898 PA2G4Q9UQ80 394 aaKnown RBP19.17■□□□□ 0.66
USF2-214ENST00000600898 SERPINB2P05120 415 aa19.16■□□□□ 0.66
USF2-214ENST00000600898 PRR5LQ6MZQ0 368 aa19.16■□□□□ 0.66
USF2-214ENST00000600898 PPP1R1BQ9UD71 204 aaPredicted RBP19.16■□□□□ 0.66
USF2-214ENST00000600898 NRXN2Q9P2S2 1712 aa19.16■□□□□ 0.66
USF2-214ENST00000600898 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
USF2-214ENST00000600898 CSF1RP07333 972 aa19.15■□□□□ 0.66
USF2-214ENST00000600898 MMP10P09238 476 aa19.15■□□□□ 0.66
USF2-214ENST00000600898 YY1P25490 414 aa19.15■□□□□ 0.66
USF2-214ENST00000600898 TTLL11Q8NHH1 800 aa19.15■□□□□ 0.66
USF2-214ENST00000600898 MYH3P11055 1940 aa19.15■□□□□ 0.66
USF2-214ENST00000600898 TAF1P21675 1872 aa19.14■□□□□ 0.65
USF2-214ENST00000600898 CTSWP56202 376 aa19.14■□□□□ 0.65
USF2-214ENST00000600898 FAM161AQ3B820 660 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms