RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 C3orf67Q6ZVT6 689 aa20.31■□□□□ 0.84
RPS28-203ENST00000600659 G2E3Q7L622 706 aa20.31■□□□□ 0.84
RPS28-203ENST00000600659 NPHP1O15259 732 aa20.3■□□□□ 0.84
RPS28-203ENST00000600659 TTLL6Q8N841 843 aa20.3■□□□□ 0.84
RPS28-203ENST00000600659 STYK1Q6J9G0 422 aa20.29■□□□□ 0.84
RPS28-203ENST00000600659 MASTLQ96GX5 879 aa20.29■□□□□ 0.84
RPS28-203ENST00000600659 MYH16Q9H6N6 1097 aa20.29■□□□□ 0.84
RPS28-203ENST00000600659 SLFN5Q08AF3 891 aa20.28■□□□□ 0.84
RPS28-203ENST00000600659 PPP1R42Q7Z4L9 355 aa20.28■□□□□ 0.84
RPS28-203ENST00000600659 SYNE4Q8N205 404 aa20.28■□□□□ 0.84
RPS28-203ENST00000600659 ZNF622Q969S3 477 aaKnown RBP eCLIP20.28■□□□□ 0.84
RPS28-203ENST00000600659 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
RPS28-203ENST00000600659 RNF123Q5XPI4 1314 aa20.28■□□□□ 0.84
RPS28-203ENST00000600659 TAF1P21675 1872 aa20.28■□□□□ 0.84
RPS28-203ENST00000600659 SNED1Q8TER0 1413 aa20.28■□□□□ 0.84
RPS28-203ENST00000600659 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
RPS28-203ENST00000600659 PRELPP51888 382 aa20.27■□□□□ 0.84
RPS28-203ENST00000600659 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.84
RPS28-203ENST00000600659 SLC10A5Q5PT55 438 aa20.27■□□□□ 0.84
RPS28-203ENST00000600659 CDCA7LQ96GN5 454 aa20.27■□□□□ 0.84
RPS28-203ENST00000600659 CHMP4AQ9BY43 222 aa20.27■□□□□ 0.84
RPS28-203ENST00000600659 NPR1P16066 1061 aa20.27■□□□□ 0.83
RPS28-203ENST00000600659 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.83
RPS28-203ENST00000600659 C7orf43Q8WVR3 580 aa20.27■□□□□ 0.83
RPS28-203ENST00000600659 ZNF428Q96B54 188 aa20.27■□□□□ 0.83
RPS28-203ENST00000600659 STK31Q9BXU1 1019 aa20.27■□□□□ 0.83
RPS28-203ENST00000600659 DICER1Q9UPY3 1922 aaKnown RBP20.26■□□□□ 0.83
RPS28-203ENST00000600659 COL4A1P02462 1669 aa20.26■□□□□ 0.83
RPS28-203ENST00000600659 E9PSI1 815 aa20.26■□□□□ 0.83
RPS28-203ENST00000600659 SLC4A2P04920 1241 aa20.26■□□□□ 0.83
RPS28-203ENST00000600659 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
RPS28-203ENST00000600659 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
RPS28-203ENST00000600659 ARHGAP27Q6ZUM4 889 aa20.26■□□□□ 0.83
RPS28-203ENST00000600659 RIC3Q7Z5B4 369 aa20.26■□□□□ 0.83
RPS28-203ENST00000600659 ZNF784Q8NCA9 323 aaPredicted RBP20.26■□□□□ 0.83
RPS28-203ENST00000600659 NFKBIEO00221 500 aa20.25■□□□□ 0.83
RPS28-203ENST00000600659 CNKSR1Q969H4 720 aa20.25■□□□□ 0.83
RPS28-203ENST00000600659 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 PI4KAP2A4QPH2 592 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 RASSF7Q02833 373 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 FLIIQ13045 1269 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 KSR2Q6VAB6 950 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 PI4KAP1Q8N8J0 262 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 MYD88Q99836 296 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 METTL22Q9BUU2 404 aaPredicted RBP20.24■□□□□ 0.83
RPS28-203ENST00000600659 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
RPS28-203ENST00000600659 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
RPS28-203ENST00000600659 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
RPS28-203ENST00000600659 C21orf2O43822 256 aa20.23■□□□□ 0.83
RPS28-203ENST00000600659 IGKV5-2P06315 115 aa20.23■□□□□ 0.83
RPS28-203ENST00000600659 HOXA10P31260 410 aaPredicted RBP20.23■□□□□ 0.83
RPS28-203ENST00000600659 SLC51AQ86UW1 340 aa20.23■□□□□ 0.83
RPS28-203ENST00000600659 DDX58O95786 925 aaKnown RBP20.22■□□□□ 0.83
RPS28-203ENST00000600659 HCLS1P14317 486 aaPredicted RBP20.22■□□□□ 0.83
RPS28-203ENST00000600659 MYH3P11055 1940 aa20.21■□□□□ 0.83
RPS28-203ENST00000600659 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
RPS28-203ENST00000600659 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
RPS28-203ENST00000600659 ZNF219Q9P2Y4 722 aaPredicted RBP20.21■□□□□ 0.83
RPS28-203ENST00000600659 LRRC37AA6NMS7 1700 aa20.2■□□□□ 0.82
RPS28-203ENST00000600659 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
RPS28-203ENST00000600659 C9orf131Q5VYM1 1079 aa20.19■□□□□ 0.82
RPS28-203ENST00000600659 NLRP3Q96P20 1036 aa20.19■□□□□ 0.82
RPS28-203ENST00000600659 ZBTB38Q8NAP3 1195 aaPredicted RBP20.18■□□□□ 0.82
RPS28-203ENST00000600659 CRAMP1Q96RY5 1269 aa20.18■□□□□ 0.82
RPS28-203ENST00000600659 ABCC4O15439 1325 aa20.18■□□□□ 0.82
RPS28-203ENST00000600659 LTBP3Q9NS15 1303 aa20.18■□□□□ 0.82
RPS28-203ENST00000600659 PCCAP05165 728 aaPredicted RBP20.17■□□□□ 0.82
RPS28-203ENST00000600659 ALDH1B1P30837 517 aa20.17■□□□□ 0.82
RPS28-203ENST00000600659 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
RPS28-203ENST00000600659 CWF19L2Q2TBE0 894 aaKnown RBP20.17■□□□□ 0.82
RPS28-203ENST00000600659 CWC25Q9NXE8 425 aaPredicted RBP20.17■□□□□ 0.82
RPS28-203ENST00000600659 NEURL1BA8MQ27 555 aa20.16■□□□□ 0.82
RPS28-203ENST00000600659 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
RPS28-203ENST00000600659 DNAAF4Q8WXU2 420 aa20.16■□□□□ 0.82
RPS28-203ENST00000600659 RPGRQ92834 1020 aaKnown RBP20.16■□□□□ 0.82
RPS28-203ENST00000600659 IRS4O14654 1257 aaPredicted RBP20.15■□□□□ 0.82
RPS28-203ENST00000600659 SF3B3Q15393 1217 aaKnown RBP20.15■□□□□ 0.82
RPS28-203ENST00000600659 MRPL50Q8N5N7 158 aaKnown RBP20.15■□□□□ 0.82
RPS28-203ENST00000600659 JARID2Q92833 1246 aaPredicted RBP20.15■□□□□ 0.82
RPS28-203ENST00000600659 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
RPS28-203ENST00000600659 RNF181Q9P0P0 153 aa20.15■□□□□ 0.82
RPS28-203ENST00000600659 LTBP1Q14766 1721 aa20.15■□□□□ 0.82
RPS28-203ENST00000600659 F6X3S4 739 aa20.14■□□□□ 0.81
RPS28-203ENST00000600659 CCDC93Q567U6 631 aa20.14■□□□□ 0.81
RPS28-203ENST00000600659 SOGA3Q5TF21 947 aa20.14■□□□□ 0.81
RPS28-203ENST00000600659 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
RPS28-203ENST00000600659 DUOX1Q9NRD9 1551 aa20.14■□□□□ 0.81
RPS28-203ENST00000600659 COL4A5P29400 1685 aa20.14■□□□□ 0.81
RPS28-203ENST00000600659 LMNB1P20700 586 aa20.13■□□□□ 0.81
RPS28-203ENST00000600659 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
RPS28-203ENST00000600659 CDHR2Q9BYE9 1310 aa20.13■□□□□ 0.81
RPS28-203ENST00000600659 PPEF1O14829 653 aaPredicted RBP20.12■□□□□ 0.81
RPS28-203ENST00000600659 CASP7P55210 303 aa20.12■□□□□ 0.81
RPS28-203ENST00000600659 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
RPS28-203ENST00000600659 NEXNQ0ZGT2 675 aa20.11■□□□□ 0.81
RPS28-203ENST00000600659 GCKRQ14397 625 aa20.11■□□□□ 0.81
RPS28-203ENST00000600659 BEND3Q5T5X7 828 aa20.11■□□□□ 0.81
RPS28-203ENST00000600659 LINS1Q8NG48 757 aa20.11■□□□□ 0.81
RPS28-203ENST00000600659 SPEF2Q9C093 1822 aa20.11■□□□□ 0.81
RPS28-203ENST00000600659 ZC3H4Q9UPT8 1303 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms