RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 SRCIN1Q9C0H9 1055 aa21.14■□□□□ 0.97
USHBP1-210ENST00000600286 CWC25Q9NXE8 425 aaPredicted RBP21.14■□□□□ 0.97
USHBP1-210ENST00000600286 TRMT112Q9UI30 125 aaKnown RBP21.14■□□□□ 0.97
USHBP1-210ENST00000600286 DDR1Q08345 913 aa21.13■□□□□ 0.97
USHBP1-210ENST00000600286 FTSJ3Q8IY81 847 aaKnown RBP21.13■□□□□ 0.97
USHBP1-210ENST00000600286 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
USHBP1-210ENST00000600286 CCT4P50991 539 aaKnown RBP21.12■□□□□ 0.97
USHBP1-210ENST00000600286 SUSD4Q5VX71 490 aa21.12■□□□□ 0.97
USHBP1-210ENST00000600286 ZNF784Q8NCA9 323 aaPredicted RBP21.12■□□□□ 0.97
USHBP1-210ENST00000600286 ALDH1L1O75891 902 aa21.11■□□□□ 0.97
USHBP1-210ENST00000600286 YBX3P16989 372 aaKnown RBP eCLIP21.11■□□□□ 0.97
USHBP1-210ENST00000600286 KLHL34Q8N239 644 aa21.11■□□□□ 0.97
USHBP1-210ENST00000600286 CD2APQ9Y5K6 639 aa21.11■□□□□ 0.97
USHBP1-210ENST00000600286 SCN7AQ01118 1682 aa21.11■□□□□ 0.97
USHBP1-210ENST00000600286 BEND3Q5T5X7 828 aa21.1■□□□□ 0.97
USHBP1-210ENST00000600286 UBN2Q6ZU65 1347 aa21.09■□□□□ 0.97
USHBP1-210ENST00000600286 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
USHBP1-210ENST00000600286 NEURL1BA8MQ27 555 aa21.09■□□□□ 0.97
USHBP1-210ENST00000600286 C9orf78Q9NZ63 289 aaPredicted RBP21.09■□□□□ 0.97
USHBP1-210ENST00000600286 BCORQ6W2J9 1755 aa21.09■□□□□ 0.97
USHBP1-210ENST00000600286 IBTKQ9P2D0 1353 aaPredicted RBP21.09■□□□□ 0.97
USHBP1-210ENST00000600286 IGKV5-2P06315 115 aa21.08■□□□□ 0.97
USHBP1-210ENST00000600286 CENPBP07199 599 aaPredicted RBP21.08■□□□□ 0.97
USHBP1-210ENST00000600286 TRIM27P14373 513 aa21.08■□□□□ 0.97
USHBP1-210ENST00000600286 PDE6BP35913 854 aa21.08■□□□□ 0.97
USHBP1-210ENST00000600286 GPR162Q16538 588 aa21.08■□□□□ 0.97
USHBP1-210ENST00000600286 CWF19L2Q2TBE0 894 aaKnown RBP21.08■□□□□ 0.97
USHBP1-210ENST00000600286 PRR5LQ6MZQ0 368 aa21.08■□□□□ 0.97
USHBP1-210ENST00000600286 DZIP1LQ8IYY4 767 aaKnown RBP21.08■□□□□ 0.97
USHBP1-210ENST00000600286 ZBTB38Q8NAP3 1195 aaPredicted RBP21.08■□□□□ 0.97
USHBP1-210ENST00000600286 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
USHBP1-210ENST00000600286 HDAC5Q9UQL6 1122 aa21.08■□□□□ 0.97
USHBP1-210ENST00000600286 BRCA1P38398 1863 aaKnown RBP21.07■□□□□ 0.96
USHBP1-210ENST00000600286 NTSR2O95665 410 aa21.07■□□□□ 0.96
USHBP1-210ENST00000600286 GCKRQ14397 625 aa21.07■□□□□ 0.96
USHBP1-210ENST00000600286 CLUAP1Q96AJ1 413 aa21.07■□□□□ 0.96
USHBP1-210ENST00000600286 BRIP1Q9BX63 1249 aa21.07■□□□□ 0.96
USHBP1-210ENST00000600286 PCCAP05165 728 aaPredicted RBP21.06■□□□□ 0.96
USHBP1-210ENST00000600286 NUTM1Q86Y26 1132 aa21.06■□□□□ 0.96
USHBP1-210ENST00000600286 NUP98P52948 1817 aa21.06■□□□□ 0.96
USHBP1-210ENST00000600286 ERFEQ4G0M1 354 aa21.05■□□□□ 0.96
USHBP1-210ENST00000600286 FAM89AQ96GI7 184 aa21.05■□□□□ 0.96
USHBP1-210ENST00000600286 NLRP3Q96P20 1036 aa21.05■□□□□ 0.96
USHBP1-210ENST00000600286 TGFB2P61812 414 aa21.04■□□□□ 0.96
USHBP1-210ENST00000600286 RTL5Q5HYW3 569 aaPredicted RBP21.04■□□□□ 0.96
USHBP1-210ENST00000600286 N4BP2Q86UW6 1770 aaPredicted RBP21.04■□□□□ 0.96
USHBP1-210ENST00000600286 PXDNLA1KZ92 1463 aa21.03■□□□□ 0.96
USHBP1-210ENST00000600286 H0YIN7 160 aa21.03■□□□□ 0.96
USHBP1-210ENST00000600286 IRS4O14654 1257 aaPredicted RBP21.03■□□□□ 0.96
USHBP1-210ENST00000600286 SLC10A5Q5PT55 438 aa21.03■□□□□ 0.96
USHBP1-210ENST00000600286 INTS3Q68E01 1043 aaKnown RBP21.03■□□□□ 0.96
USHBP1-210ENST00000600286 CHMP4BQ9H444 224 aaKnown RBP21.03■□□□□ 0.96
USHBP1-210ENST00000600286 ABCC4O15439 1325 aa21.03■□□□□ 0.96
USHBP1-210ENST00000600286 ARFGEF2Q9Y6D5 1785 aa21.02■□□□□ 0.96
USHBP1-210ENST00000600286 H7C1W4 665 aa21.02■□□□□ 0.96
USHBP1-210ENST00000600286 GRM8O00222 908 aa21.02■□□□□ 0.96
USHBP1-210ENST00000600286 PLIN1O60240 522 aa21.02■□□□□ 0.96
USHBP1-210ENST00000600286 PDE3AQ14432 1141 aa21.02■□□□□ 0.96
USHBP1-210ENST00000600286 UBE3BQ7Z3V4 1068 aa21.02■□□□□ 0.96
USHBP1-210ENST00000600286 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.96
USHBP1-210ENST00000600286 ITPRIPQ8IWB1 547 aa21.01■□□□□ 0.95
USHBP1-210ENST00000600286 CDHR2Q9BYE9 1310 aa21.01■□□□□ 0.95
USHBP1-210ENST00000600286 PDE8AO60658 829 aa21■□□□□ 0.95
USHBP1-210ENST00000600286 GNAI3P08754 354 aa21■□□□□ 0.95
USHBP1-210ENST00000600286 HCLS1P14317 486 aaPredicted RBP21■□□□□ 0.95
USHBP1-210ENST00000600286 RRP1P56182 461 aaKnown RBP21■□□□□ 0.95
USHBP1-210ENST00000600286 C10orf71Q711Q0 1435 aa20.99■□□□□ 0.95
USHBP1-210ENST00000600286 GRIN3BO60391 1043 aa20.99■□□□□ 0.95
USHBP1-210ENST00000600286 C2CD5Q86YS7 1000 aa20.99■□□□□ 0.95
USHBP1-210ENST00000600286 TMEM57Q8N5G2 664 aa20.99■□□□□ 0.95
USHBP1-210ENST00000600286 JARID2Q92833 1246 aaPredicted RBP20.99■□□□□ 0.95
USHBP1-210ENST00000600286 RPGRQ92834 1020 aaKnown RBP20.99■□□□□ 0.95
USHBP1-210ENST00000600286 UBTFL1P0CB47 393 aaPredicted RBP20.98■□□□□ 0.95
USHBP1-210ENST00000600286 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
USHBP1-210ENST00000600286 ANKRD36CQ5JPF3 1778 aa20.97■□□□□ 0.95
USHBP1-210ENST00000600286 SYNE4Q8N205 404 aa20.97■□□□□ 0.95
USHBP1-210ENST00000600286 PANK1Q8TE04 598 aa20.97■□□□□ 0.95
USHBP1-210ENST00000600286 ZNF622Q969S3 477 aaKnown RBP eCLIP20.97■□□□□ 0.95
USHBP1-210ENST00000600286 RBM17Q96I25 401 aaKnown RBP20.97■□□□□ 0.95
USHBP1-210ENST00000600286 TNNQ9UQP3 1299 aa20.97■□□□□ 0.95
USHBP1-210ENST00000600286 SUPT16HQ9Y5B9 1047 aaKnown RBP20.97■□□□□ 0.95
USHBP1-210ENST00000600286 NPR1P16066 1061 aa20.96■□□□□ 0.95
USHBP1-210ENST00000600286 CCDC152Q4G0S7 254 aa20.96■□□□□ 0.95
USHBP1-210ENST00000600286 DDX46Q7L014 1031 aaKnown RBP20.96■□□□□ 0.95
USHBP1-210ENST00000600286 MASTLQ96GX5 879 aa20.96■□□□□ 0.95
USHBP1-210ENST00000600286 USP44Q9H0E7 712 aa20.96■□□□□ 0.95
USHBP1-210ENST00000600286 DDX19BQ9UMR2 479 aa20.96■□□□□ 0.95
USHBP1-210ENST00000600286 NRXN2Q9P2S2 1712 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 ARFGEF1Q9Y6D6 1849 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 A0A0G2JLW4 131 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 KLRG2A4D1S0 409 aaPredicted RBP20.95■□□□□ 0.94
USHBP1-210ENST00000600286 ALDH1B1P30837 517 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 CNKSR1Q969H4 720 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 PLA2G12BQ9BX93 195 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 PIM2Q9P1W9 311 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 UTYO14607 1347 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 RIC1Q4ADV7 1423 aa20.95■□□□□ 0.94
USHBP1-210ENST00000600286 AFDNP55196 1824 aaKnown RBP20.94■□□□□ 0.94
USHBP1-210ENST00000600286 NBPF7P0C2Y1 421 aaPredicted RBP20.94■□□□□ 0.94
USHBP1-210ENST00000600286 DPEP1P16444 411 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms