RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 LMBRD1Q9NUN5 540 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 RAD50Q92878 1312 aa13.87□□□□□ -0.19
ARHGEF1-220ENST00000600274 FERMT3Q86UX7 667 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 PDRG1Q9NUG6 133 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 RBM8AQ9Y5S9 174 aaKnown RBP13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 A0A0D9SFI3 127 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 MCM2P49736 904 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 DBNDD2Q9BQY9 259 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 KDM6AO15550 1401 aaPredicted RBP13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 LARGE1O95461 756 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 TIMM10P62072 90 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 KLHL40Q2TBA0 621 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 EVI5LQ96CN4 794 aa13.86□□□□□ -0.19
ARHGEF1-220ENST00000600274 GPTP24298 496 aa13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 SPATA31A3Q5VYP0 1347 aa13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 ZSCAN23Q3MJ62 389 aa13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 LRRC2Q9BYS8 371 aa13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 TTC41PQ6P2S7 1318 aa13.85□□□□□ -0.19
ARHGEF1-220ENST00000600274 GORABQ5T7V8 394 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 GPT2Q8TD30 523 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 CYP46A1Q9Y6A2 500 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 PTMSP20962 102 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 ANAPC15P60006 121 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 TAF7LQ5H9L4 462 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 HSP90B1P14625 803 aaKnown RBP13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 RUFY3Q7L099 469 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 TAF6LQ9Y6J9 622 aa13.84□□□□□ -0.19
ARHGEF1-220ENST00000600274 MST1RQ04912 1400 aa13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 AOX1Q06278 1338 aa13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 GADD45BO75293 160 aaPredicted RBP13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 ZNF589Q86UQ0 364 aaPredicted RBP13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 GOLIM4O00461 696 aa13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 NBPF14Q5TI25 921 aa13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 LIMCH1Q9UPQ0 1083 aa13.83□□□□□ -0.2
ARHGEF1-220ENST00000600274 CNPY2Q9Y2B0 182 aa13.82□□□□□ -0.2
ARHGEF1-220ENST00000600274 ESPNB1AK53 854 aa13.82□□□□□ -0.2
ARHGEF1-220ENST00000600274 MTX1Q13505 466 aa13.82□□□□□ -0.2
ARHGEF1-220ENST00000600274 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
ARHGEF1-220ENST00000600274 CREB3L3Q68CJ9 461 aa13.82□□□□□ -0.2
ARHGEF1-220ENST00000600274 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
ARHGEF1-220ENST00000600274 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
ARHGEF1-220ENST00000600274 IL2RBP14784 551 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 FAM173BQ6P4H8 233 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 TMEM63CQ9P1W3 806 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 MSNP26038 577 aaKnown RBP13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 GJB2P29033 226 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 TNNI3KQ59H18 835 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 FAM89AQ96GI7 184 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 FPGT-TNNI3KV9GXZ4 949 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 NCAPD2Q15021 1401 aa13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 CYP2E1P05181 493 aaPredicted RBP13.81□□□□□ -0.2
ARHGEF1-220ENST00000600274 LRRC37A3O60309 1634 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 BRD1O95696 1058 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 USP48Q86UV5 1035 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 SYNE4Q8N205 404 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 SYT1P21579 422 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 TNS3Q68CZ2 1445 aa13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 PUS3Q9BZE2 481 aaKnown RBP13.8□□□□□ -0.2
ARHGEF1-220ENST00000600274 WDR33Q9C0J8 1336 aaKnown RBP13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 RGPD5Q99666 1765 aa13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 DNAJC10Q8IXB1 793 aa13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 RBSNQ9H1K0 784 aa13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 PTMAP06454 111 aaKnown RBP13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF1-220ENST00000600274 SLC27A2O14975 620 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 STX6O43752 255 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 CUL4AQ13619 759 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 WDR17Q8IZU2 1322 aa13.78□□□□□ -0.2
ARHGEF1-220ENST00000600274 ME3Q16798 604 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms