RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-206ENST00000600118 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
CHMP2A-206ENST00000600118 NUP98P52948 1817 aa16.02■□□□□ 0.16
CHMP2A-206ENST00000600118 NTSR2O95665 410 aa16.01■□□□□ 0.15
CHMP2A-206ENST00000600118 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
CHMP2A-206ENST00000600118 COL24A1Q17RW2 1714 aa16■□□□□ 0.15
CHMP2A-206ENST00000600118 ANKRD36CQ5JPF3 1778 aa16■□□□□ 0.15
CHMP2A-206ENST00000600118 UTYO14607 1347 aa15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 H7C1W4 665 aa15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 SERPINB2P05120 415 aa15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 PCCAP05165 728 aaPredicted RBP15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 PTGER2P43116 358 aa15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 PPP1R42Q7Z4L9 355 aa15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
CHMP2A-206ENST00000600118 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 GRM8O00222 908 aa15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 CASP7P55210 303 aa15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 MVPQ14764 893 aaKnown RBP15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 NBPF5PQ86XG9 351 aaPredicted RBP15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 ZBTB38Q8NAP3 1195 aaPredicted RBP15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 NYXQ9GZU5 481 aa15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 TRMT112Q9UI30 125 aaKnown RBP15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
CHMP2A-206ENST00000600118 PRR5LQ6MZQ0 368 aa15.97■□□□□ 0.15
CHMP2A-206ENST00000600118 TPTE2Q6XPS3 522 aa15.97■□□□□ 0.15
CHMP2A-206ENST00000600118 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
CHMP2A-206ENST00000600118 SH3TC1Q8TE82 1336 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 FAM177BA6PVY3 158 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 SLC10A5Q5PT55 438 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 SYNE4Q8N205 404 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 CNBD1Q8NA66 436 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 FAM89AQ96GI7 184 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
CHMP2A-206ENST00000600118 CDHR2Q9BYE9 1310 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 NBPF7P0C2Y1 421 aaPredicted RBP15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 POLD1P28340 1107 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 ERFEQ4G0M1 354 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 UBE3BQ7Z3V4 1068 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 MEIS3Q99687 375 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
CHMP2A-206ENST00000600118 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
CHMP2A-206ENST00000600118 DDX19BQ9UMR2 479 aa15.94■□□□□ 0.14
CHMP2A-206ENST00000600118 GNAI3P08754 354 aa15.93■□□□□ 0.14
CHMP2A-206ENST00000600118 RTL5Q5HYW3 569 aaPredicted RBP15.93■□□□□ 0.14
CHMP2A-206ENST00000600118 KAZALD1Q96I82 304 aa15.93■□□□□ 0.14
CHMP2A-206ENST00000600118 CRBNQ96SW2 442 aa15.93■□□□□ 0.14
CHMP2A-206ENST00000600118 PLA2G12BQ9BX93 195 aa15.93■□□□□ 0.14
CHMP2A-206ENST00000600118 C10orf71Q711Q0 1435 aa15.93■□□□□ 0.14
CHMP2A-206ENST00000600118 KLRG2A4D1S0 409 aaPredicted RBP15.92■□□□□ 0.14
CHMP2A-206ENST00000600118 IRS4O14654 1257 aaPredicted RBP15.92■□□□□ 0.14
CHMP2A-206ENST00000600118 ST5P78524 1137 aa15.92■□□□□ 0.14
CHMP2A-206ENST00000600118 CCDC24Q8N4L8 307 aa15.92■□□□□ 0.14
CHMP2A-206ENST00000600118 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
CHMP2A-206ENST00000600118 AFDNP55196 1824 aaKnown RBP15.91■□□□□ 0.14
CHMP2A-206ENST00000600118 UBTFL1P0CB47 393 aaPredicted RBP15.91■□□□□ 0.14
CHMP2A-206ENST00000600118 HCLS1P14317 486 aaPredicted RBP15.91■□□□□ 0.14
CHMP2A-206ENST00000600118 GTF2E1P29083 439 aaPredicted RBP15.91■□□□□ 0.14
CHMP2A-206ENST00000600118 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
CHMP2A-206ENST00000600118 ZBTB40Q9NUA8 1239 aa15.91■□□□□ 0.14
CHMP2A-206ENST00000600118 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
CHMP2A-206ENST00000600118 FOXO4P98177 505 aa15.9■□□□□ 0.14
CHMP2A-206ENST00000600118 EPHA10Q5JZY3 1008 aa15.9■□□□□ 0.14
CHMP2A-206ENST00000600118 C3orf67Q6ZVT6 689 aa15.9■□□□□ 0.14
CHMP2A-206ENST00000600118 CHMP4BQ9H444 224 aaKnown RBP15.9■□□□□ 0.14
CHMP2A-206ENST00000600118 NPHP1O15259 732 aa15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 PDE8AO60658 829 aa15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 GNAI2P04899 355 aa15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 CRY2Q49AN0 593 aa15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 ANKRD44Q8N8A2 993 aa15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 HDAC5Q9UQL6 1122 aa15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 LRRFIP2Q9Y608 721 aaKnown RBP15.89■□□□□ 0.13
CHMP2A-206ENST00000600118 CSF1RP07333 972 aa15.88■□□□□ 0.13
CHMP2A-206ENST00000600118 CTSWP56202 376 aa15.88■□□□□ 0.13
CHMP2A-206ENST00000600118 IRX6P78412 446 aaPredicted RBP15.88■□□□□ 0.13
CHMP2A-206ENST00000600118 SF3B3Q15393 1217 aaKnown RBP15.88■□□□□ 0.13
CHMP2A-206ENST00000600118 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
CHMP2A-206ENST00000600118 NLRP3Q96P20 1036 aa15.88■□□□□ 0.13
CHMP2A-206ENST00000600118 BICC1Q9H694 974 aaKnown RBP15.88■□□□□ 0.13
CHMP2A-206ENST00000600118 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
CHMP2A-206ENST00000600118 PDE6BP35913 854 aa15.87■□□□□ 0.13
CHMP2A-206ENST00000600118 TTLL11Q8NHH1 800 aa15.87■□□□□ 0.13
CHMP2A-206ENST00000600118 CD2APQ9Y5K6 639 aa15.87■□□□□ 0.13
CHMP2A-206ENST00000600118 DDX60Q8IY21 1712 aaKnown RBP15.87■□□□□ 0.13
CHMP2A-206ENST00000600118 LAMB2P55268 1798 aa15.86■□□□□ 0.13
CHMP2A-206ENST00000600118 MTX1Q13505 466 aa15.86■□□□□ 0.13
CHMP2A-206ENST00000600118 C1orf115Q9H7X2 142 aa15.86■□□□□ 0.13
CHMP2A-206ENST00000600118 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
CHMP2A-206ENST00000600118 RTL9Q8NET4 1388 aa15.86■□□□□ 0.13
CHMP2A-206ENST00000600118 SRGNP10124 158 aa15.85■□□□□ 0.13
CHMP2A-206ENST00000600118 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-206ENST00000600118 AAMPQ13685 434 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms