RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 ZC3H15Q8WU90 426 aaKnown RBP18.6■□□□□ 0.57
HOMER3-212ENST00000600077 FMNL2Q96PY5 1086 aa18.6■□□□□ 0.57
HOMER3-212ENST00000600077 ZNF408Q9H9D4 720 aa18.6■□□□□ 0.57
HOMER3-212ENST00000600077 PGAP2Q9UHJ9 254 aa18.6■□□□□ 0.57
HOMER3-212ENST00000600077 TEFQ10587 303 aa18.59■□□□□ 0.57
HOMER3-212ENST00000600077 CDC37L1Q7L3B6 337 aa18.59■□□□□ 0.57
HOMER3-212ENST00000600077 GLIS2Q9BZE0 524 aaPredicted RBP18.59■□□□□ 0.57
HOMER3-212ENST00000600077 GTF2E1P29083 439 aaPredicted RBP18.58■□□□□ 0.56
HOMER3-212ENST00000600077 CTU1Q7Z7A3 348 aaKnown RBP18.58■□□□□ 0.56
HOMER3-212ENST00000600077 NIP7Q9Y221 180 aaKnown RBP eCLIP18.58■□□□□ 0.56
HOMER3-212ENST00000600077 HUNKP57058 714 aa18.57■□□□□ 0.56
HOMER3-212ENST00000600077 VPS33BQ9H267 617 aa18.57■□□□□ 0.56
HOMER3-212ENST00000600077 CCDC102AQ96A19 550 aa18.56■□□□□ 0.56
HOMER3-212ENST00000600077 ZIC5Q96T25 663 aa18.56■□□□□ 0.56
HOMER3-212ENST00000600077 COL4A5P29400 1685 aa18.56■□□□□ 0.56
HOMER3-212ENST00000600077 CDHR2Q9BYE9 1310 aa18.55■□□□□ 0.56
HOMER3-212ENST00000600077 HMOX1P09601 288 aa18.55■□□□□ 0.56
HOMER3-212ENST00000600077 CRY2Q49AN0 593 aa18.55■□□□□ 0.56
HOMER3-212ENST00000600077 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
HOMER3-212ENST00000600077 PKN2Q16513 984 aaKnown RBP18.54■□□□□ 0.56
HOMER3-212ENST00000600077 RGMBQ6NW40 437 aa18.54■□□□□ 0.56
HOMER3-212ENST00000600077 RNF186Q9NXI6 227 aa18.54■□□□□ 0.56
HOMER3-212ENST00000600077 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
HOMER3-212ENST00000600077 TRPA1O75762 1119 aa18.53■□□□□ 0.56
HOMER3-212ENST00000600077 HABP4Q5JVS0 413 aaKnown RBP18.53■□□□□ 0.56
HOMER3-212ENST00000600077 TMX4Q9H1E5 349 aaPredicted RBP18.53■□□□□ 0.56
HOMER3-212ENST00000600077 PPIP5K2O43314 1243 aa18.52■□□□□ 0.56
HOMER3-212ENST00000600077 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-212ENST00000600077 KIF23Q02241 960 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-212ENST00000600077 RPGRQ92834 1020 aaKnown RBP18.52■□□□□ 0.56
HOMER3-212ENST00000600077 NYXQ9GZU5 481 aa18.52■□□□□ 0.56
HOMER3-212ENST00000600077 PANK3Q9H999 370 aa18.52■□□□□ 0.56
HOMER3-212ENST00000600077 ZNRF3Q9ULT6 936 aa18.52■□□□□ 0.56
HOMER3-212ENST00000600077 HPS5Q9UPZ3 1129 aa18.52■□□□□ 0.56
HOMER3-212ENST00000600077 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
HOMER3-212ENST00000600077 FAM155AB1AL88 458 aaPredicted RBP18.51■□□□□ 0.55
HOMER3-212ENST00000600077 CXCL9Q07325 125 aa18.51■□□□□ 0.55
HOMER3-212ENST00000600077 REM2Q8IYK8 340 aaPredicted RBP18.51■□□□□ 0.55
HOMER3-212ENST00000600077 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
HOMER3-212ENST00000600077 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
HOMER3-212ENST00000600077 GMPSP49915 693 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-212ENST00000600077 C2orf69Q8N8R5 385 aa18.5■□□□□ 0.55
HOMER3-212ENST00000600077 IL17REQ8NFR9 667 aa18.5■□□□□ 0.55
HOMER3-212ENST00000600077 BCL2L13Q9BXK5 485 aa18.5■□□□□ 0.55
HOMER3-212ENST00000600077 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
HOMER3-212ENST00000600077 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
HOMER3-212ENST00000600077 SUPT20HQ8NEM7 779 aa18.49■□□□□ 0.55
HOMER3-212ENST00000600077 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
HOMER3-212ENST00000600077 PPEF1O14829 653 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-212ENST00000600077 PIP4K2AP48426 406 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-212ENST00000600077 ZNF157P51786 506 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-212ENST00000600077 HIRAP54198 1017 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-212ENST00000600077 TNIP1Q15025 636 aa18.48■□□□□ 0.55
HOMER3-212ENST00000600077 AOC3Q16853 763 aa18.48■□□□□ 0.55
HOMER3-212ENST00000600077 USP48Q86UV5 1035 aa18.48■□□□□ 0.55
HOMER3-212ENST00000600077 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
HOMER3-212ENST00000600077 RBM17Q96I25 401 aaKnown RBP18.48■□□□□ 0.55
HOMER3-212ENST00000600077 GBA2Q9HCG7 927 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-212ENST00000600077 AKAP11Q9UKA4 1901 aa18.48■□□□□ 0.55
HOMER3-212ENST00000600077 BTBD11A6QL63 1104 aa18.47■□□□□ 0.55
HOMER3-212ENST00000600077 H7C1D1 291 aa18.47■□□□□ 0.55
HOMER3-212ENST00000600077 SNRPA1P09661 255 aaKnown RBP18.46■□□□□ 0.55
HOMER3-212ENST00000600077 HDAC9Q9UKV0 1011 aa18.46■□□□□ 0.55
HOMER3-212ENST00000600077 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
HOMER3-212ENST00000600077 CSRNP1Q96S65 589 aa18.45■□□□□ 0.54
HOMER3-212ENST00000600077 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
HOMER3-212ENST00000600077 RIC1Q4ADV7 1423 aa18.45■□□□□ 0.54
HOMER3-212ENST00000600077 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
HOMER3-212ENST00000600077 HSPA5P11021 654 aaKnown RBP18.44■□□□□ 0.54
HOMER3-212ENST00000600077 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
HOMER3-212ENST00000600077 TRPM4Q8TD43 1214 aa18.44■□□□□ 0.54
HOMER3-212ENST00000600077 KNSTRNQ9Y448 316 aa18.44■□□□□ 0.54
HOMER3-212ENST00000600077 ABCC12Q96J65 1359 aa18.43■□□□□ 0.54
HOMER3-212ENST00000600077 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
HOMER3-212ENST00000600077 KCNQ3O43525 872 aa18.43■□□□□ 0.54
HOMER3-212ENST00000600077 SLC10A3P09131 477 aa18.43■□□□□ 0.54
HOMER3-212ENST00000600077 HLFQ16534 295 aa18.43■□□□□ 0.54
HOMER3-212ENST00000600077 RTFDC1Q9BY42 306 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-212ENST00000600077 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
HOMER3-212ENST00000600077 KRT26Q7Z3Y9 468 aa18.42■□□□□ 0.54
HOMER3-212ENST00000600077 ATP6V0A2Q9Y487 856 aa18.42■□□□□ 0.54
HOMER3-212ENST00000600077 NBPF26B4DH59 902 aa18.41■□□□□ 0.54
HOMER3-212ENST00000600077 NBPF10Q6P3W6 841 aaKnown RBP18.41■□□□□ 0.54
HOMER3-212ENST00000600077 IBTKQ9P2D0 1353 aaPredicted RBP18.41■□□□□ 0.54
HOMER3-212ENST00000600077 ERVV-1B6SEH8 477 aa18.4■□□□□ 0.54
HOMER3-212ENST00000600077 RAD17O75943 681 aa18.4■□□□□ 0.54
HOMER3-212ENST00000600077 KIAA2012Q0VF49 1180 aa18.4■□□□□ 0.54
HOMER3-212ENST00000600077 FBXO46Q6PJ61 603 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-212ENST00000600077 MICALL2Q8IY33 904 aa18.4■□□□□ 0.54
HOMER3-212ENST00000600077 DPF2Q92785 391 aa18.4■□□□□ 0.54
HOMER3-212ENST00000600077 DCPSQ96C86 337 aaKnown RBP18.4■□□□□ 0.54
HOMER3-212ENST00000600077 PRAMEF22A3QJZ6 481 aa18.39■□□□□ 0.53
HOMER3-212ENST00000600077 DPP8Q6V1X1 898 aaPredicted RBP18.39■□□□□ 0.53
HOMER3-212ENST00000600077 FXR1P51114 621 aaKnown RBP eCLIP18.38■□□□□ 0.53
HOMER3-212ENST00000600077 NOM1Q5C9Z4 860 aaKnown RBP18.37■□□□□ 0.53
HOMER3-212ENST00000600077 DLK2Q6UY11 383 aa18.37■□□□□ 0.53
HOMER3-212ENST00000600077 MPNDQ8N594 471 aa18.37■□□□□ 0.53
HOMER3-212ENST00000600077 ZNF296Q8WUU4 475 aaPredicted RBP18.37■□□□□ 0.53
HOMER3-212ENST00000600077 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
HOMER3-212ENST00000600077 BBOX1O75936 387 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 545.3 ms