RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 TCIRG1Q13488 830 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 C9orf131Q5VYM1 1079 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 PRPF40BQ6NWY9 871 aaKnown RBP10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 NLRP10Q86W26 655 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 TSPYL6Q8N831 410 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 CHMP4AQ9BY43 222 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 SNED1Q8TER0 1413 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 C21orf2O43822 256 aa10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 TWISTNBQ3B726 338 aaPredicted RBP10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 CCDC30Q5VVM6 783 aa10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 ISCA1Q9BUE6 129 aa10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 UTP14AQ9BVJ6 771 aaKnown RBP10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 ZNF521Q96K83 1311 aa10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 ZC3H4Q9UPT8 1303 aaKnown RBP10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 LRRC37AA6NMS7 1700 aa10.3□□□□□ -0.76
CHMP2A-205ENST00000600006 HOXA10P31260 410 aaPredicted RBP10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 PRELPP51888 382 aa10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 SLC10A5Q5PT55 438 aa10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 SOGA3Q5TF21 947 aa10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 C7orf43Q8WVR3 580 aa10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 PHAXQ9H814 394 aaKnown RBP10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 RNF181Q9P0P0 153 aa10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 SALL2Q9Y467 1007 aaPredicted RBP10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 SH3TC1Q8TE82 1336 aa10.29□□□□□ -0.76
CHMP2A-205ENST00000600006 LMNB1P20700 586 aa10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 ALDH1B1P30837 517 aa10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 TRIM28Q13263 835 aaKnown RBP10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 CCDC93Q567U6 631 aa10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 C3orf67Q6ZVT6 689 aa10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 ZNF219Q9P2Y4 722 aaPredicted RBP10.28□□□□□ -0.76
CHMP2A-205ENST00000600006 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 ZNF526Q8TF50 670 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 RPGRQ92834 1020 aaKnown RBP10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 NLRP3Q96P20 1036 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 CRAMP1Q96RY5 1269 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 STK31Q9BXU1 1019 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 MYH16Q9H6N6 1097 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 TAF1P21675 1872 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 MYH3P11055 1940 aa10.27□□□□□ -0.77
CHMP2A-205ENST00000600006 ATP5J2-PTCD1G3V325 749 aa10.26□□□□□ -0.77
CHMP2A-205ENST00000600006 VAMP4O75379 141 aa10.26□□□□□ -0.77
CHMP2A-205ENST00000600006 DDX58O95786 925 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-205ENST00000600006 EXOSC9Q06265 439 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-205ENST00000600006 TRMT112Q9UI30 125 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-205ENST00000600006 WDR90Q96KV7 1748 aa10.26□□□□□ -0.77
CHMP2A-205ENST00000600006 COL4A1P02462 1669 aa10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 TCERG1O14776 1098 aaKnown RBP10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 KIF3CO14782 793 aa10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 C1QTNF8P60827 252 aa10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 CC2D2BQ6DHV5 1058 aa10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 SYNE4Q8N205 404 aa10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 RBM17Q96I25 401 aaKnown RBP10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 METTL22Q9BUU2 404 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 ABCC4O15439 1325 aa10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 KDM2BQ8NHM5 1336 aa10.25□□□□□ -0.77
CHMP2A-205ENST00000600006 LTBP1Q14766 1721 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 DUOX1Q9NRD9 1551 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 PPEF1O14829 653 aaPredicted RBP10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 SLC4A2P04920 1241 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 HCLS1P14317 486 aaPredicted RBP10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 FKBP4Q02790 459 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 OLFM4Q6UX06 510 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 KSR2Q6VAB6 950 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 G2E3Q7L622 706 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 RTKN2Q8IZC4 609 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 CCDC191Q8NCU4 936 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 FAM89AQ96GI7 184 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 MYD88Q99836 296 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 MAP3K2Q9Y2U5 619 aa10.24□□□□□ -0.77
CHMP2A-205ENST00000600006 COL4A5P29400 1685 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 PI4KAP2A4QPH2 592 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 FLIIQ13045 1269 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 SF3B3Q15393 1217 aaKnown RBP10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 GRIPAP1Q4V328 841 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 MIER1Q8N108 512 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 PI4KAP1Q8N8J0 262 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 ZBTB38Q8NAP3 1195 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 PSMD1Q99460 953 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 NMRK2Q9NPI5 230 aa10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 CWC25Q9NXE8 425 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-205ENST00000600006 GLTPD2A6NH11 291 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 E9PSI1 815 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 IRS4O14654 1257 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 PCCAP05165 728 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 IGKV5-2P06315 115 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 GRAPQ13588 217 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 GRAPLQ8TC17 118 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 ATP6V0A2Q9Y487 856 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 CDHR2Q9BYE9 1310 aa10.22□□□□□ -0.77
CHMP2A-205ENST00000600006 SCN4AP35499 1836 aa10.21□□□□□ -0.77
CHMP2A-205ENST00000600006 SPEF2Q9C093 1822 aa10.21□□□□□ -0.77
CHMP2A-205ENST00000600006 NEURL1BA8MQ27 555 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms