RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 ARHGAP33O14559 1287 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 LBX1P52954 281 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 POTEEQ6S8J3 1075 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 KIF20BQ96Q89 1820 aa12.8□□□□□ -0.36
LINC00343-205ENST00000598229 ITGBL1O95965 494 aaPredicted RBP12.79□□□□□ -0.36
LINC00343-205ENST00000598229 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
LINC00343-205ENST00000598229 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
LINC00343-205ENST00000598229 ADAMTS7Q9UKP4 1686 aa12.78□□□□□ -0.36
LINC00343-205ENST00000598229 DDNO94850 711 aaPredicted RBP12.78□□□□□ -0.36
LINC00343-205ENST00000598229 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
LINC00343-205ENST00000598229 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
LINC00343-205ENST00000598229 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
LINC00343-205ENST00000598229 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
LINC00343-205ENST00000598229 NRXN2Q9P2S2 1712 aa12.77□□□□□ -0.36
LINC00343-205ENST00000598229 C21orf2O43822 256 aa12.77□□□□□ -0.37
LINC00343-205ENST00000598229 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
LINC00343-205ENST00000598229 PDE6BP35913 854 aa12.77□□□□□ -0.37
LINC00343-205ENST00000598229 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.37
LINC00343-205ENST00000598229 TAF1DQ9H5J8 278 aaPredicted RBP12.77□□□□□ -0.37
LINC00343-205ENST00000598229 RASSF10A6NK89 507 aa12.76□□□□□ -0.37
LINC00343-205ENST00000598229 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
LINC00343-205ENST00000598229 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
LINC00343-205ENST00000598229 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00343-205ENST00000598229 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
LINC00343-205ENST00000598229 COL15A1P39059 1388 aa12.76□□□□□ -0.37
LINC00343-205ENST00000598229 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
LINC00343-205ENST00000598229 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
LINC00343-205ENST00000598229 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
LINC00343-205ENST00000598229 DLEC1Q9Y238 1755 aa12.75□□□□□ -0.37
LINC00343-205ENST00000598229 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
LINC00343-205ENST00000598229 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
LINC00343-205ENST00000598229 TJP1Q07157 1748 aa12.74□□□□□ -0.37
LINC00343-205ENST00000598229 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
LINC00343-205ENST00000598229 A0A087WZG4 1122 aa12.73□□□□□ -0.37
LINC00343-205ENST00000598229 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
LINC00343-205ENST00000598229 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
LINC00343-205ENST00000598229 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
LINC00343-205ENST00000598229 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
LINC00343-205ENST00000598229 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
LINC00343-205ENST00000598229 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
LINC00343-205ENST00000598229 TK2O00142 265 aa12.72□□□□□ -0.37
LINC00343-205ENST00000598229 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
LINC00343-205ENST00000598229 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
LINC00343-205ENST00000598229 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
LINC00343-205ENST00000598229 CCDC88AQ3V6T2 1871 aa12.72□□□□□ -0.37
LINC00343-205ENST00000598229 STARD3NLO95772 234 aa12.71□□□□□ -0.37
LINC00343-205ENST00000598229 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
LINC00343-205ENST00000598229 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
LINC00343-205ENST00000598229 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
LINC00343-205ENST00000598229 HACL1Q9UJ83 578 aa12.71□□□□□ -0.37
LINC00343-205ENST00000598229 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
LINC00343-205ENST00000598229 CCDC85CA6NKD9 419 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 SRGNP10124 158 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 PDE4AP27815 886 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 TBC1D9BQ66K14 1250 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 PRPF40BQ6NWY9 871 aaKnown RBP12.7□□□□□ -0.38
LINC00343-205ENST00000598229 BICDL1Q6ZP65 573 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 CNTROBQ8N137 903 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
LINC00343-205ENST00000598229 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
LINC00343-205ENST00000598229 CANXP27824 592 aaKnown RBP12.69□□□□□ -0.38
LINC00343-205ENST00000598229 EPHX2P34913 555 aa12.69□□□□□ -0.38
LINC00343-205ENST00000598229 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
LINC00343-205ENST00000598229 EAPPQ56P03 285 aaPredicted RBP12.69□□□□□ -0.38
LINC00343-205ENST00000598229 MASTLQ96GX5 879 aa12.69□□□□□ -0.38
LINC00343-205ENST00000598229 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
LINC00343-205ENST00000598229 SCN4AP35499 1836 aa12.68□□□□□ -0.38
LINC00343-205ENST00000598229 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
LINC00343-205ENST00000598229 ECE1P42892 770 aa12.68□□□□□ -0.38
LINC00343-205ENST00000598229 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
LINC00343-205ENST00000598229 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
LINC00343-205ENST00000598229 CNBD1Q8NA66 436 aa12.67□□□□□ -0.38
LINC00343-205ENST00000598229 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
LINC00343-205ENST00000598229 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
LINC00343-205ENST00000598229 FZD9O00144 591 aa12.66□□□□□ -0.38
LINC00343-205ENST00000598229 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
LINC00343-205ENST00000598229 MAP2K2P36507 400 aa12.66□□□□□ -0.38
LINC00343-205ENST00000598229 ST5P78524 1137 aa12.66□□□□□ -0.38
LINC00343-205ENST00000598229 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00343-205ENST00000598229 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
LINC00343-205ENST00000598229 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
LINC00343-205ENST00000598229 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
LINC00343-205ENST00000598229 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00343-205ENST00000598229 MRC1P22897 1456 aa12.65□□□□□ -0.38
LINC00343-205ENST00000598229 KLRG2A4D1S0 409 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-205ENST00000598229 CA12O43570 354 aa12.65□□□□□ -0.38
LINC00343-205ENST00000598229 IL13P35225 146 aa12.65□□□□□ -0.38
LINC00343-205ENST00000598229 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-205ENST00000598229 PSEN2P49810 448 aa12.65□□□□□ -0.38
LINC00343-205ENST00000598229 GPC2Q8N158 579 aa12.65□□□□□ -0.38
LINC00343-205ENST00000598229 CCDC24Q8N4L8 307 aa12.65□□□□□ -0.38
LINC00343-205ENST00000598229 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms