RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
UPF1-205ENST00000598209 STYK1Q6J9G0 422 aa17.8■□□□□ 0.44
UPF1-205ENST00000598209 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
UPF1-205ENST00000598209 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
UPF1-205ENST00000598209 RIC1Q4ADV7 1423 aa17.8■□□□□ 0.44
UPF1-205ENST00000598209 LAMB2P55268 1798 aa17.79■□□□□ 0.44
UPF1-205ENST00000598209 E9PSI1 815 aa17.79■□□□□ 0.44
UPF1-205ENST00000598209 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
UPF1-205ENST00000598209 DDX58O95786 925 aaKnown RBP17.79■□□□□ 0.44
UPF1-205ENST00000598209 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
UPF1-205ENST00000598209 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
UPF1-205ENST00000598209 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
UPF1-205ENST00000598209 SBF1O95248 1867 aa17.78■□□□□ 0.44
UPF1-205ENST00000598209 NPR1P16066 1061 aa17.78■□□□□ 0.44
UPF1-205ENST00000598209 CNKSR1Q969H4 720 aa17.78■□□□□ 0.44
UPF1-205ENST00000598209 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
UPF1-205ENST00000598209 SLFN5Q08AF3 891 aa17.77■□□□□ 0.44
UPF1-205ENST00000598209 G2E3Q7L622 706 aa17.77■□□□□ 0.44
UPF1-205ENST00000598209 ZNF428Q96B54 188 aa17.77■□□□□ 0.44
UPF1-205ENST00000598209 TRMT112Q9UI30 125 aaKnown RBP17.77■□□□□ 0.44
UPF1-205ENST00000598209 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.44
UPF1-205ENST00000598209 CRY2Q49AN0 593 aa17.76■□□□□ 0.43
UPF1-205ENST00000598209 CDCA7LQ96GN5 454 aa17.76■□□□□ 0.43
UPF1-205ENST00000598209 MYD88Q99836 296 aa17.76■□□□□ 0.43
UPF1-205ENST00000598209 MAP3K2Q9Y2U5 619 aa17.76■□□□□ 0.43
UPF1-205ENST00000598209 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
UPF1-205ENST00000598209 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
UPF1-205ENST00000598209 FLIIQ13045 1269 aa17.75■□□□□ 0.43
UPF1-205ENST00000598209 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
UPF1-205ENST00000598209 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
UPF1-205ENST00000598209 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
UPF1-205ENST00000598209 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
UPF1-205ENST00000598209 SYNE4Q8N205 404 aa17.75■□□□□ 0.43
UPF1-205ENST00000598209 METTL22Q9BUU2 404 aaPredicted RBP17.75■□□□□ 0.43
UPF1-205ENST00000598209 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
UPF1-205ENST00000598209 ADCY9O60503 1353 aa17.75■□□□□ 0.43
UPF1-205ENST00000598209 PI4KAP2A4QPH2 592 aa17.74■□□□□ 0.43
UPF1-205ENST00000598209 C21orf2O43822 256 aa17.74■□□□□ 0.43
UPF1-205ENST00000598209 C3orf67Q6ZVT6 689 aa17.74■□□□□ 0.43
UPF1-205ENST00000598209 PI4KAP1Q8N8J0 262 aa17.74■□□□□ 0.43
UPF1-205ENST00000598209 RPGRQ92834 1020 aaKnown RBP17.74■□□□□ 0.43
UPF1-205ENST00000598209 NLRP3Q96P20 1036 aa17.74■□□□□ 0.43
UPF1-205ENST00000598209 HCLS1P14317 486 aaPredicted RBP17.73■□□□□ 0.43
UPF1-205ENST00000598209 ALDH1B1P30837 517 aa17.73■□□□□ 0.43
UPF1-205ENST00000598209 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
UPF1-205ENST00000598209 TRMT2AQ8IZ69 625 aaKnown RBP17.72■□□□□ 0.43
UPF1-205ENST00000598209 CCDC191Q8NCU4 936 aa17.72■□□□□ 0.43
UPF1-205ENST00000598209 FAM89AQ96GI7 184 aa17.72■□□□□ 0.43
UPF1-205ENST00000598209 HOXA10P31260 410 aaPredicted RBP17.71■□□□□ 0.43
UPF1-205ENST00000598209 RASSF7Q02833 373 aa17.71■□□□□ 0.43
UPF1-205ENST00000598209 NEXNQ0ZGT2 675 aa17.71■□□□□ 0.43
UPF1-205ENST00000598209 ZNF784Q8NCA9 323 aaPredicted RBP17.71■□□□□ 0.43
UPF1-205ENST00000598209 RBM17Q96I25 401 aaKnown RBP17.71■□□□□ 0.43
UPF1-205ENST00000598209 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
UPF1-205ENST00000598209 TAF1P21675 1872 aa17.71■□□□□ 0.43
UPF1-205ENST00000598209 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
UPF1-205ENST00000598209 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
UPF1-205ENST00000598209 SOGA3Q5TF21 947 aa17.7■□□□□ 0.42
UPF1-205ENST00000598209 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
UPF1-205ENST00000598209 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
UPF1-205ENST00000598209 DICER1Q9UPY3 1922 aaKnown RBP17.7■□□□□ 0.42
UPF1-205ENST00000598209 NFKBIEO00221 500 aa17.69■□□□□ 0.42
UPF1-205ENST00000598209 IGKV5-2P06315 115 aa17.69■□□□□ 0.42
UPF1-205ENST00000598209 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
UPF1-205ENST00000598209 DNAAF4Q8WXU2 420 aa17.69■□□□□ 0.42
UPF1-205ENST00000598209 CRAMP1Q96RY5 1269 aa17.69■□□□□ 0.42
UPF1-205ENST00000598209 MYH3P11055 1940 aa17.68■□□□□ 0.42
UPF1-205ENST00000598209 IRS4O14654 1257 aaPredicted RBP17.68■□□□□ 0.42
UPF1-205ENST00000598209 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
UPF1-205ENST00000598209 RNF181Q9P0P0 153 aa17.68■□□□□ 0.42
UPF1-205ENST00000598209 TIAM2Q8IVF5 1701 aa17.67■□□□□ 0.42
UPF1-205ENST00000598209 NEURL1BA8MQ27 555 aa17.67■□□□□ 0.42
UPF1-205ENST00000598209 CWF19L2Q2TBE0 894 aaKnown RBP17.67■□□□□ 0.42
UPF1-205ENST00000598209 CCDC93Q567U6 631 aa17.67■□□□□ 0.42
UPF1-205ENST00000598209 JARID2Q92833 1246 aaPredicted RBP17.67■□□□□ 0.42
UPF1-205ENST00000598209 F6X3S4 739 aa17.66■□□□□ 0.42
UPF1-205ENST00000598209 LMNB1P20700 586 aa17.66■□□□□ 0.42
UPF1-205ENST00000598209 PRELPP51888 382 aa17.66■□□□□ 0.42
UPF1-205ENST00000598209 OLFM4Q6UX06 510 aa17.66■□□□□ 0.42
UPF1-205ENST00000598209 MRPL50Q8N5N7 158 aaKnown RBP17.66■□□□□ 0.42
UPF1-205ENST00000598209 TAOK3Q9H2K8 898 aa17.66■□□□□ 0.42
UPF1-205ENST00000598209 ABCC4O15439 1325 aa17.66■□□□□ 0.42
UPF1-205ENST00000598209 LTBP3Q9NS15 1303 aa17.66■□□□□ 0.42
UPF1-205ENST00000598209 PPEF1O14829 653 aaPredicted RBP17.65■□□□□ 0.42
UPF1-205ENST00000598209 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
UPF1-205ENST00000598209 SF3B3Q15393 1217 aaKnown RBP17.65■□□□□ 0.42
UPF1-205ENST00000598209 DDX46Q7L014 1031 aaKnown RBP17.65■□□□□ 0.42
UPF1-205ENST00000598209 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
UPF1-205ENST00000598209 CT47B1P0C2W7 299 aaPredicted RBP17.64■□□□□ 0.41
UPF1-205ENST00000598209 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
UPF1-205ENST00000598209 LINS1Q8NG48 757 aa17.64■□□□□ 0.41
UPF1-205ENST00000598209 CDHR2Q9BYE9 1310 aa17.64■□□□□ 0.41
UPF1-205ENST00000598209 PDE8AO60658 829 aa17.63■□□□□ 0.41
UPF1-205ENST00000598209 GCKRQ14397 625 aa17.63■□□□□ 0.41
UPF1-205ENST00000598209 ALDH1L2Q3SY69 923 aa17.63■□□□□ 0.41
UPF1-205ENST00000598209 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
UPF1-205ENST00000598209 ZNF526Q8TF50 670 aaPredicted RBP17.63■□□□□ 0.41
UPF1-205ENST00000598209 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
UPF1-205ENST00000598209 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
UPF1-205ENST00000598209 GRAPQ13588 217 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms