RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 RFX5P48382 616 aaPredicted RBP27.66■■■□□ 2.02
SPTBN4-209ENST00000596411 PTH1RQ03431 593 aa27.66■■■□□ 2.02
SPTBN4-209ENST00000596411 ZSCAN31Q96LW9 406 aaPredicted RBP27.66■■■□□ 2.02
SPTBN4-209ENST00000596411 SH2B1Q9NRF2 756 aaPredicted RBP27.66■■■□□ 2.02
SPTBN4-209ENST00000596411 MED23Q9ULK4 1368 aa27.66■■■□□ 2.02
SPTBN4-209ENST00000596411 MAP4K1Q92918 833 aa27.66■■■□□ 2.02
SPTBN4-209ENST00000596411 CABP4P57796 275 aa27.65■■■□□ 2.02
SPTBN4-209ENST00000596411 NOL8Q76FK4 1167 aaKnown RBP27.65■■■□□ 2.02
SPTBN4-209ENST00000596411 PLBD2Q8NHP8 589 aa27.65■■■□□ 2.02
SPTBN4-209ENST00000596411 NUP188Q5SRE5 1749 aa27.64■■■□□ 2.02
SPTBN4-209ENST00000596411 EPHA10Q5JZY3 1008 aa27.64■■■□□ 2.02
SPTBN4-209ENST00000596411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.64■■■□□ 2.02
SPTBN4-209ENST00000596411 NCLP19338 710 aaKnown RBP27.64■■■□□ 2.01
SPTBN4-209ENST00000596411 CHRNA2Q15822 529 aa27.64■■■□□ 2.01
SPTBN4-209ENST00000596411 CABLES1Q8TDN4 633 aa27.64■■■□□ 2.01
SPTBN4-209ENST00000596411 WDR17Q8IZU2 1322 aa27.63■■■□□ 2.01
SPTBN4-209ENST00000596411 PCDH11XQ9BZA7 1347 aa27.63■■■□□ 2.01
SPTBN4-209ENST00000596411 PCDH11YQ9BZA8 1340 aa27.63■■■□□ 2.01
SPTBN4-209ENST00000596411 CASTP20810 708 aaKnown RBP27.63■■■□□ 2.01
SPTBN4-209ENST00000596411 ZKSCAN1P17029 563 aaPredicted RBP27.62■■■□□ 2.01
SPTBN4-209ENST00000596411 CASP7P55210 303 aa27.62■■■□□ 2.01
SPTBN4-209ENST00000596411 LRSAM1Q6UWE0 723 aa27.62■■■□□ 2.01
SPTBN4-209ENST00000596411 ANP32BQ92688 251 aaKnown RBP27.62■■■□□ 2.01
SPTBN4-209ENST00000596411 ALDH8A1Q9H2A2 487 aaPredicted RBP27.62■■■□□ 2.01
SPTBN4-209ENST00000596411 TMEM63CQ9P1W3 806 aa27.62■■■□□ 2.01
SPTBN4-209ENST00000596411 CYP46A1Q9Y6A2 500 aa27.62■■■□□ 2.01
SPTBN4-209ENST00000596411 PDIA4P13667 645 aaKnown RBP27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 KLHL34Q8N239 644 aa27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 CCDC8Q9H0W5 538 aaPredicted RBP27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 ATP5JP18859 108 aa27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 PTPN12Q05209 780 aaKnown RBP27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 NMIQ13287 307 aaPredicted RBP27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 PRPF40BQ6NWY9 871 aaKnown RBP27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 TICAM2Q86XR7 235 aa27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 TLR7Q9NYK1 1049 aaKnown RBP27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 RBM8AQ9Y5S9 174 aaKnown RBP27.61■■■□□ 2.01
SPTBN4-209ENST00000596411 KCPQ6ZWJ8 1503 aa27.6■■■□□ 2.01
SPTBN4-209ENST00000596411 ERVV-2B6SEH9 535 aa27.6■■■□□ 2.01
SPTBN4-209ENST00000596411 NKX1-1Q15270 411 aaPredicted RBP27.6■■■□□ 2.01
SPTBN4-209ENST00000596411 SYAP1Q96A49 352 aaPredicted RBP27.6■■■□□ 2.01
SPTBN4-209ENST00000596411 TRIM44Q96DX7 344 aaPredicted RBP27.6■■■□□ 2.01
SPTBN4-209ENST00000596411 PDRG1Q9NUG6 133 aa27.6■■■□□ 2.01
SPTBN4-209ENST00000596411 ABCA3Q99758 1704 aa27.6■■■□□ 2.01
SPTBN4-209ENST00000596411 TSGA10IPQ3SY00 556 aa27.59■■■□□ 2.01
SPTBN4-209ENST00000596411 CREB3L3Q68CJ9 461 aa27.59■■■□□ 2.01
SPTBN4-209ENST00000596411 JAKMIP1Q96N16 626 aaKnown RBP27.59■■■□□ 2.01
SPTBN4-209ENST00000596411 ESPNB1AK53 854 aa27.59■■■□□ 2.01
SPTBN4-209ENST00000596411 ZSCAN22P10073 491 aaPredicted RBP27.59■■■□□ 2.01
SPTBN4-209ENST00000596411 PSMA5P28066 241 aa27.59■■■□□ 2.01
SPTBN4-209ENST00000596411 COL5A2P05997 1499 aaPredicted RBP27.59■■■□□ 2.01
SPTBN4-209ENST00000596411 HMG20BQ9P0W2 317 aa27.58■■■□□ 2.01
SPTBN4-209ENST00000596411 TNS2Q63HR2 1409 aa27.58■■■□□ 2.01
SPTBN4-209ENST00000596411 TJP1Q07157 1748 aa27.58■■■□□ 2.01
SPTBN4-209ENST00000596411 SHANK3Q9BYB0 1731 aa27.58■■■□□ 2.01
SPTBN4-209ENST00000596411 ADCK5Q3MIX3 580 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 TNNI3KQ59H18 835 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 RNF20Q5VTR2 975 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 BRINP3Q76B58 766 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 FAM227BQ96M60 508 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 SIL1Q9H173 461 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 SMC3Q9UQE7 1217 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 FPGT-TNNI3KV9GXZ4 949 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 SOS2Q07890 1332 aaPredicted RBP27.57■■■□□ 2
SPTBN4-209ENST00000596411 FSD1Q9BTV5 496 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 RBM27Q9P2N5 1060 aaKnown RBP27.57■■■□□ 2
SPTBN4-209ENST00000596411 ATP6V1DQ9Y5K8 247 aa27.57■■■□□ 2
SPTBN4-209ENST00000596411 STX6O43752 255 aa27.56■■■□□ 2
SPTBN4-209ENST00000596411 PRIM1P49642 420 aaKnown RBP27.56■■■□□ 2
SPTBN4-209ENST00000596411 FOXD4L5Q5VV16 416 aaPredicted RBP27.56■■■□□ 2
SPTBN4-209ENST00000596411 FOXD4L4Q8WXT5 416 aaPredicted RBP27.56■■■□□ 2
SPTBN4-209ENST00000596411 BOLA2Q9H3K6 86 aa27.56■■■□□ 2
SPTBN4-209ENST00000596411 NSFL1CQ9UNZ2 370 aaKnown RBP27.56■■■□□ 2
SPTBN4-209ENST00000596411 SLC27A2O14975 620 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 HS1BP3Q53T59 392 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 UBE3BQ7Z3V4 1068 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 ZCRB1Q8TBF4 217 aaKnown RBP27.55■■■□□ 2
SPTBN4-209ENST00000596411 CHAMP1Q96JM3 812 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 RBSNQ9H1K0 784 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 A0A0D9SFI3 127 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 H7C1W4 665 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 SYT1P21579 422 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 USPL1Q5W0Q7 1092 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 PDLIM2Q96JY6 352 aa27.55■■■□□ 2
SPTBN4-209ENST00000596411 A0A087WZG4 1122 aa27.54■■■□□ 2
SPTBN4-209ENST00000596411 KLHDC4Q8TBB5 520 aa27.54■■■□□ 2
SPTBN4-209ENST00000596411 DBNLQ9UJU6 430 aaKnown RBP27.54■■■□□ 2
SPTBN4-209ENST00000596411 PHF14O94880 888 aa27.53■■■□□ 2
SPTBN4-209ENST00000596411 ANKRD1Q15327 319 aa27.53■■■□□ 2
SPTBN4-209ENST00000596411 GPR108Q9NPR9 543 aa27.53■■■□□ 2
SPTBN4-209ENST00000596411 F13A1P00488 732 aa27.53■■■□□ 2
SPTBN4-209ENST00000596411 LARGE1O95461 756 aa27.52■■■□□ 2
SPTBN4-209ENST00000596411 NBPF26B4DH59 902 aa27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 NBPF14Q5TI25 921 aa27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 NBPF10Q6P3W6 841 aaKnown RBP27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 USP48Q86UV5 1035 aa27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 NBPF15Q8N660 670 aa27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 TFCP2Q12800 502 aa27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 CARD10Q9BWT7 1032 aa27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 PRDM11Q9NQV5 511 aa27.51■■□□□ 1.99
SPTBN4-209ENST00000596411 SYCE3A1L190 88 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms