RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 RUFY2Q8WXA3 655 aa19.58■□□□□ 0.72
SIN3B-206ENST00000595541 PIK3C2AO00443 1686 aa19.57■□□□□ 0.72
SIN3B-206ENST00000595541 NMIQ13287 307 aaPredicted RBP19.57■□□□□ 0.72
SIN3B-206ENST00000595541 CYB5RLQ6IPT4 315 aa19.57■□□□□ 0.72
SIN3B-206ENST00000595541 LARP1Q6PKG0 1096 aaKnown RBP19.57■□□□□ 0.72
SIN3B-206ENST00000595541 MAP4K1Q92918 833 aa19.57■□□□□ 0.72
SIN3B-206ENST00000595541 C16orf45Q96MC5 204 aaPredicted RBP19.57■□□□□ 0.72
SIN3B-206ENST00000595541 SLC27A2O14975 620 aa19.56■□□□□ 0.72
SIN3B-206ENST00000595541 NCBP1Q09161 790 aaKnown RBP19.56■□□□□ 0.72
SIN3B-206ENST00000595541 TNMDQ9H2S6 317 aa19.56■□□□□ 0.72
SIN3B-206ENST00000595541 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
SIN3B-206ENST00000595541 A0A0D9SFI3 127 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 NR1I2O75469 434 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 TPM3P06753 285 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 PGBD1Q96JS3 809 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 BCL11BQ9C0K0 894 aaPredicted RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 TLR7Q9NYK1 1049 aaKnown RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 ELP1O95163 1332 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 GOLGA6L6A8MZA4 724 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 STK3Q13188 491 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 TOB2Q14106 344 aaPredicted RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 CWF19L2Q2TBE0 894 aaKnown RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 HSP90AB4PQ58FF6 505 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 AACSQ86V21 672 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 ZKSCAN1P17029 563 aaPredicted RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 KCNJ4P48050 445 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 CHAF1AQ13111 956 aaPredicted RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 MTX1Q13505 466 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 PROSER3Q2NL68 480 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 CCDC144BQ3MJ40 725 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 CCDC144CPQ8IYA2 1237 aa19.55■□□□□ 0.72
SIN3B-206ENST00000595541 EAF2Q96CJ1 260 aaPredicted RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
SIN3B-206ENST00000595541 SASH1O94885 1247 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 IFIT2P09913 472 aaKnown RBP19.54■□□□□ 0.72
SIN3B-206ENST00000595541 ZSCAN25Q6NSZ9 544 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 LEO1Q8WVC0 666 aaPredicted RBP19.54■□□□□ 0.72
SIN3B-206ENST00000595541 EVI5LQ96CN4 794 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 AMOTL2Q9Y2J4 779 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 CEMIPQ8WUJ3 1361 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 ZNF75DP51815 510 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
SIN3B-206ENST00000595541 TNRQ92752 1358 aa19.53■□□□□ 0.72
SIN3B-206ENST00000595541 CACTINQ8WUQ7 758 aaKnown RBP19.53■□□□□ 0.72
SIN3B-206ENST00000595541 SPATA32Q96LK8 384 aa19.53■□□□□ 0.72
SIN3B-206ENST00000595541 TRIM5Q9C035 493 aa19.53■□□□□ 0.72
SIN3B-206ENST00000595541 DNAJC25Q9H1X3 360 aa19.53■□□□□ 0.72
SIN3B-206ENST00000595541 NPHP4O75161 1426 aaPredicted RBP19.53■□□□□ 0.72
SIN3B-206ENST00000595541 DRC7Q8IY82 874 aa19.53■□□□□ 0.72
SIN3B-206ENST00000595541 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
SIN3B-206ENST00000595541 ESF1Q9H501 851 aaKnown RBP19.53■□□□□ 0.72
SIN3B-206ENST00000595541 DIP2BQ9P265 1576 aa19.52■□□□□ 0.72
SIN3B-206ENST00000595541 JAK2O60674 1132 aa19.52■□□□□ 0.72
SIN3B-206ENST00000595541 RBM43Q6ZSC3 357 aaKnown RBP19.52■□□□□ 0.72
SIN3B-206ENST00000595541 ZNF589Q86UQ0 364 aaPredicted RBP19.52■□□□□ 0.72
SIN3B-206ENST00000595541 DDX11Q96FC9 970 aa19.52■□□□□ 0.72
SIN3B-206ENST00000595541 MAP3K2Q9Y2U5 619 aa19.52■□□□□ 0.72
SIN3B-206ENST00000595541 PRAMEF22A3QJZ6 481 aa19.52■□□□□ 0.72
SIN3B-206ENST00000595541 ARID5BQ14865 1188 aa19.52■□□□□ 0.72
SIN3B-206ENST00000595541 EDC3Q96F86 508 aaKnown RBP19.51■□□□□ 0.71
SIN3B-206ENST00000595541 BOLA2Q9H3K6 86 aa19.51■□□□□ 0.71
SIN3B-206ENST00000595541 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
SIN3B-206ENST00000595541 CLSTN2Q9H4D0 955 aa19.51■□□□□ 0.71
SIN3B-206ENST00000595541 C9orf78Q9NZ63 289 aaPredicted RBP19.51■□□□□ 0.71
SIN3B-206ENST00000595541 CHGBP05060 677 aa19.5■□□□□ 0.71
SIN3B-206ENST00000595541 NBPF6Q5VWK0 638 aa19.5■□□□□ 0.71
SIN3B-206ENST00000595541 NBPF4Q96M43 638 aa19.5■□□□□ 0.71
SIN3B-206ENST00000595541 TNNT1P13805 278 aa19.5■□□□□ 0.71
SIN3B-206ENST00000595541 RPS6KB1P23443 525 aa19.5■□□□□ 0.71
SIN3B-206ENST00000595541 ZNF165P49910 485 aa19.5■□□□□ 0.71
SIN3B-206ENST00000595541 BLOC1S2Q6QNY1 142 aa19.5■□□□□ 0.71
SIN3B-206ENST00000595541 TDRD7Q8NHU6 1098 aaKnown RBP19.5■□□□□ 0.71
SIN3B-206ENST00000595541 A0A087WWV3 80 aa19.49■□□□□ 0.71
SIN3B-206ENST00000595541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.49■□□□□ 0.71
SIN3B-206ENST00000595541 KLHDC4Q8TBB5 520 aa19.49■□□□□ 0.71
SIN3B-206ENST00000595541 GTPBP4Q9BZE4 634 aaKnown RBP19.49■□□□□ 0.71
SIN3B-206ENST00000595541 NPHP3Q7Z494 1330 aa19.49■□□□□ 0.71
SIN3B-206ENST00000595541 SCAND2PQ9GZW5 306 aaPredicted RBP19.49■□□□□ 0.71
SIN3B-206ENST00000595541 GOLGA6L4A6NEF3 574 aa19.49■□□□□ 0.71
SIN3B-206ENST00000595541 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
SIN3B-206ENST00000595541 SUCLG2Q96I99 432 aa19.49■□□□□ 0.71
SIN3B-206ENST00000595541 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
SIN3B-206ENST00000595541 MARF1Q9Y4F3 1742 aaKnown RBP19.48■□□□□ 0.71
SIN3B-206ENST00000595541 USP27XA6NNY8 438 aa19.48■□□□□ 0.71
SIN3B-206ENST00000595541 MPRIPQ6WCQ1 1025 aa19.48■□□□□ 0.71
SIN3B-206ENST00000595541 SIL1Q9H173 461 aa19.48■□□□□ 0.71
SIN3B-206ENST00000595541 PDCP20941 246 aa19.48■□□□□ 0.71
SIN3B-206ENST00000595541 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
SIN3B-206ENST00000595541 PLEKHG1Q9ULL1 1385 aa19.47■□□□□ 0.71
SIN3B-206ENST00000595541 FGD1P98174 961 aa19.47■□□□□ 0.71
SIN3B-206ENST00000595541 GPATCH3Q96I76 525 aa19.47■□□□□ 0.71
SIN3B-206ENST00000595541 DDX19AQ9NUU7 478 aaKnown RBP19.47■□□□□ 0.71
SIN3B-206ENST00000595541 CTNNA3Q9UI47 895 aa19.47■□□□□ 0.71
SIN3B-206ENST00000595541 COL15A1P39059 1388 aa19.47■□□□□ 0.71
SIN3B-206ENST00000595541 PSMA5P28066 241 aa19.47■□□□□ 0.71
SIN3B-206ENST00000595541 CLIP2Q9UDT6 1046 aa19.47■□□□□ 0.71
SIN3B-206ENST00000595541 CHD2O14647 1828 aaKnown RBP19.47■□□□□ 0.71
SIN3B-206ENST00000595541 BTBD11A6QL63 1104 aa19.46■□□□□ 0.71
SIN3B-206ENST00000595541 SMTNL1A8MU46 457 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms