RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
NOTCH3-203ENST00000595514 BCORQ6W2J9 1755 aa13.89□□□□□ -0.19
NOTCH3-203ENST00000595514 COL4A5P29400 1685 aa13.89□□□□□ -0.19
NOTCH3-203ENST00000595514 CLEC4GQ6UXB4 293 aa13.89□□□□□ -0.19
NOTCH3-203ENST00000595514 CDC37L1Q7L3B6 337 aa13.89□□□□□ -0.19
NOTCH3-203ENST00000595514 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
NOTCH3-203ENST00000595514 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
NOTCH3-203ENST00000595514 KIF23Q02241 960 aaPredicted RBP13.88□□□□□ -0.19
NOTCH3-203ENST00000595514 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
NOTCH3-203ENST00000595514 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
NOTCH3-203ENST00000595514 PGAP2Q9UHJ9 254 aa13.88□□□□□ -0.19
NOTCH3-203ENST00000595514 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
NOTCH3-203ENST00000595514 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
NOTCH3-203ENST00000595514 GTF2E1P29083 439 aaPredicted RBP13.87□□□□□ -0.19
NOTCH3-203ENST00000595514 IL13P35225 146 aa13.87□□□□□ -0.19
NOTCH3-203ENST00000595514 RGMBQ6NW40 437 aa13.87□□□□□ -0.19
NOTCH3-203ENST00000595514 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
NOTCH3-203ENST00000595514 CCDC102AQ96A19 550 aa13.87□□□□□ -0.19
NOTCH3-203ENST00000595514 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
NOTCH3-203ENST00000595514 FAM155AB1AL88 458 aaPredicted RBP13.86□□□□□ -0.19
NOTCH3-203ENST00000595514 PKN2Q16513 984 aaKnown RBP13.86□□□□□ -0.19
NOTCH3-203ENST00000595514 UBR2Q8IWV8 1755 aa13.86□□□□□ -0.19
NOTCH3-203ENST00000595514 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
NOTCH3-203ENST00000595514 PPIP5K2O43314 1243 aa13.85□□□□□ -0.19
NOTCH3-203ENST00000595514 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
NOTCH3-203ENST00000595514 TEFQ10587 303 aa13.85□□□□□ -0.19
NOTCH3-203ENST00000595514 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
NOTCH3-203ENST00000595514 FMNL2Q96PY5 1086 aa13.85□□□□□ -0.19
NOTCH3-203ENST00000595514 ZNF157P51786 506 aaPredicted RBP13.84□□□□□ -0.19
NOTCH3-203ENST00000595514 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
NOTCH3-203ENST00000595514 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
NOTCH3-203ENST00000595514 HDAC9Q9UKV0 1011 aa13.84□□□□□ -0.19
NOTCH3-203ENST00000595514 HMOX1P09601 288 aa13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 FXR1P51114 621 aaKnown RBP eCLIP13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 CXCL9Q07325 125 aa13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 CRY2Q49AN0 593 aa13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 MORC1Q86VD1 984 aa13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 C2orf69Q8N8R5 385 aa13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 RPGRQ92834 1020 aaKnown RBP13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 GBA2Q9HCG7 927 aaPredicted RBP13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 CDHR2Q9BYE9 1310 aa13.83□□□□□ -0.2
NOTCH3-203ENST00000595514 MKI67P46013 3256 aaKnown RBP13.82□□□□□ -0.2
NOTCH3-203ENST00000595514 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
NOTCH3-203ENST00000595514 AOC3Q16853 763 aa13.82□□□□□ -0.2
NOTCH3-203ENST00000595514 TRPM4Q8TD43 1214 aa13.82□□□□□ -0.2
NOTCH3-203ENST00000595514 TMX4Q9H1E5 349 aaPredicted RBP13.82□□□□□ -0.2
NOTCH3-203ENST00000595514 ZNRF3Q9ULT6 936 aa13.82□□□□□ -0.2
NOTCH3-203ENST00000595514 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
NOTCH3-203ENST00000595514 RGL2O15211 777 aa13.81□□□□□ -0.2
NOTCH3-203ENST00000595514 CSRNP1Q96S65 589 aa13.81□□□□□ -0.2
NOTCH3-203ENST00000595514 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
NOTCH3-203ENST00000595514 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
NOTCH3-203ENST00000595514 H7C1D1 291 aa13.8□□□□□ -0.2
NOTCH3-203ENST00000595514 PPEF1O14829 653 aaPredicted RBP13.8□□□□□ -0.2
NOTCH3-203ENST00000595514 TNIP1Q15025 636 aa13.8□□□□□ -0.2
NOTCH3-203ENST00000595514 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
NOTCH3-203ENST00000595514 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
NOTCH3-203ENST00000595514 PANK3Q9H999 370 aa13.8□□□□□ -0.2
NOTCH3-203ENST00000595514 SLC10A3P09131 477 aa13.79□□□□□ -0.2
NOTCH3-203ENST00000595514 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
NOTCH3-203ENST00000595514 DLK2Q6UY11 383 aa13.79□□□□□ -0.2
NOTCH3-203ENST00000595514 KRT26Q7Z3Y9 468 aa13.79□□□□□ -0.2
NOTCH3-203ENST00000595514 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
NOTCH3-203ENST00000595514 ABCC12Q96J65 1359 aa13.79□□□□□ -0.2
NOTCH3-203ENST00000595514 RAD17O75943 681 aa13.78□□□□□ -0.2
NOTCH3-203ENST00000595514 FBXO46Q6PJ61 603 aaPredicted RBP13.78□□□□□ -0.2
NOTCH3-203ENST00000595514 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
NOTCH3-203ENST00000595514 SUPT20HQ8NEM7 779 aa13.78□□□□□ -0.2
NOTCH3-203ENST00000595514 ZNF296Q8WUU4 475 aaPredicted RBP13.78□□□□□ -0.2
NOTCH3-203ENST00000595514 RBM17Q96I25 401 aaKnown RBP13.78□□□□□ -0.2
NOTCH3-203ENST00000595514 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
NOTCH3-203ENST00000595514 DLL1O00548 723 aa13.77□□□□□ -0.21
NOTCH3-203ENST00000595514 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
NOTCH3-203ENST00000595514 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
NOTCH3-203ENST00000595514 CRAMP1Q96RY5 1269 aa13.77□□□□□ -0.21
NOTCH3-203ENST00000595514 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
NOTCH3-203ENST00000595514 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
NOTCH3-203ENST00000595514 HLFQ16534 295 aa13.76□□□□□ -0.21
NOTCH3-203ENST00000595514 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
NOTCH3-203ENST00000595514 RIC1Q4ADV7 1423 aa13.75□□□□□ -0.21
NOTCH3-203ENST00000595514 AKAP11Q9UKA4 1901 aa13.75□□□□□ -0.21
NOTCH3-203ENST00000595514 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
NOTCH3-203ENST00000595514 ADM5C9JUS6 153 aa13.75□□□□□ -0.21
NOTCH3-203ENST00000595514 KCNQ3O43525 872 aa13.75□□□□□ -0.21
NOTCH3-203ENST00000595514 DCPSQ96C86 337 aaKnown RBP13.75□□□□□ -0.21
NOTCH3-203ENST00000595514 PRAMEF22A3QJZ6 481 aa13.74□□□□□ -0.21
NOTCH3-203ENST00000595514 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
NOTCH3-203ENST00000595514 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
NOTCH3-203ENST00000595514 SAMD7Q7Z3H4 446 aa13.74□□□□□ -0.21
NOTCH3-203ENST00000595514 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
NOTCH3-203ENST00000595514 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
NOTCH3-203ENST00000595514 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
NOTCH3-203ENST00000595514 KIAA2012Q0VF49 1180 aa13.73□□□□□ -0.21
NOTCH3-203ENST00000595514 TBC1D10BQ4KMP7 808 aaPredicted RBP13.73□□□□□ -0.21
NOTCH3-203ENST00000595514 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
NOTCH3-203ENST00000595514 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
NOTCH3-203ENST00000595514 RASAL3Q86YV0 1011 aa13.73□□□□□ -0.21
NOTCH3-203ENST00000595514 RTFDC1Q9BY42 306 aaPredicted RBP13.73□□□□□ -0.21
NOTCH3-203ENST00000595514 SULF1Q8IWU6 871 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms