RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 DUSP27Q5VZP5 1158 aa30.52■■■□□ 2.48
LSM4-204ENST00000594828 UTP14AQ9BVJ6 771 aaKnown RBP30.52■■■□□ 2.48
LSM4-204ENST00000594828 IFT57Q9NWB7 429 aa30.52■■■□□ 2.48
LSM4-204ENST00000594828 TIAM2Q8IVF5 1701 aa30.52■■■□□ 2.48
LSM4-204ENST00000594828 RIC1Q4ADV7 1423 aa30.51■■■□□ 2.47
LSM4-204ENST00000594828 VEGFAP15692 232 aaPredicted RBP30.51■■■□□ 2.47
LSM4-204ENST00000594828 GNAI1P63096 354 aa30.51■■■□□ 2.47
LSM4-204ENST00000594828 OLFM4Q6UX06 510 aa30.51■■■□□ 2.47
LSM4-204ENST00000594828 RTKN2Q8IZC4 609 aa30.51■■■□□ 2.47
LSM4-204ENST00000594828 DBF4Q9UBU7 674 aaPredicted RBP30.51■■■□□ 2.47
LSM4-204ENST00000594828 HOXA10P31260 410 aaPredicted RBP30.5■■■□□ 2.47
LSM4-204ENST00000594828 FKBP4Q02790 459 aaKnown RBP eCLIP30.49■■■□□ 2.47
LSM4-204ENST00000594828 TCIRG1Q13488 830 aa30.49■■■□□ 2.47
LSM4-204ENST00000594828 NLRP3Q96P20 1036 aa30.49■■■□□ 2.47
LSM4-204ENST00000594828 DICER1Q9UPY3 1922 aaKnown RBP30.49■■■□□ 2.47
LSM4-204ENST00000594828 SLC10A5Q5PT55 438 aa30.48■■■□□ 2.47
LSM4-204ENST00000594828 RBM17Q96I25 401 aaKnown RBP30.48■■■□□ 2.47
LSM4-204ENST00000594828 FSTL1Q12841 308 aa30.47■■■□□ 2.47
LSM4-204ENST00000594828 NLRP10Q86W26 655 aa30.47■■■□□ 2.47
LSM4-204ENST00000594828 ANP32CO43423 234 aa30.46■■■□□ 2.47
LSM4-204ENST00000594828 APLP1P51693 650 aa30.46■■■□□ 2.47
LSM4-204ENST00000594828 ANKRD13DQ6ZTN6 518 aa30.46■■■□□ 2.47
LSM4-204ENST00000594828 C3orf67Q6ZVT6 689 aa30.46■■■□□ 2.47
LSM4-204ENST00000594828 CRAMP1Q96RY5 1269 aa30.46■■■□□ 2.47
LSM4-204ENST00000594828 HYPKQ9NX55 129 aa30.46■■■□□ 2.47
LSM4-204ENST00000594828 CC2D2BQ6DHV5 1058 aa30.45■■■□□ 2.47
LSM4-204ENST00000594828 PLBD2Q8NHP8 589 aa30.45■■■□□ 2.47
LSM4-204ENST00000594828 ZNF277Q9NRM2 450 aaPredicted RBP30.45■■■□□ 2.47
LSM4-204ENST00000594828 RNF123Q5XPI4 1314 aa30.45■■■□□ 2.46
LSM4-204ENST00000594828 POTECB2RU33 542 aa30.43■■■□□ 2.46
LSM4-204ENST00000594828 ELL2O00472 640 aaPredicted RBP30.43■■■□□ 2.46
LSM4-204ENST00000594828 SYNE4Q8N205 404 aa30.43■■■□□ 2.46
LSM4-204ENST00000594828 SMC1BQ8NDV3 1235 aa30.43■■■□□ 2.46
LSM4-204ENST00000594828 TRMT112Q9UI30 125 aaKnown RBP30.43■■■□□ 2.46
LSM4-204ENST00000594828 MRS2Q9HD23 443 aa30.42■■■□□ 2.46
LSM4-204ENST00000594828 DDNO94850 711 aaPredicted RBP30.41■■■□□ 2.46
LSM4-204ENST00000594828 ANKRD36CQ5JPF3 1778 aa30.41■■■□□ 2.46
LSM4-204ENST00000594828 PSMD1Q99460 953 aa30.4■■■□□ 2.46
LSM4-204ENST00000594828 SH3TC1Q8TE82 1336 aa30.4■■■□□ 2.46
LSM4-204ENST00000594828 WDR90Q96KV7 1748 aa30.39■■■□□ 2.46
LSM4-204ENST00000594828 TCERG1O14776 1098 aaKnown RBP30.39■■■□□ 2.46
LSM4-204ENST00000594828 PPEF1O14829 653 aaPredicted RBP30.39■■■□□ 2.46
LSM4-204ENST00000594828 HCLS1P14317 486 aaPredicted RBP30.39■■■□□ 2.46
LSM4-204ENST00000594828 IARSP41252 1262 aaKnown RBP30.39■■■□□ 2.46
LSM4-204ENST00000594828 GRIPAP1Q4V328 841 aa30.39■■■□□ 2.46
LSM4-204ENST00000594828 C8orf58Q8NAV2 365 aa30.39■■■□□ 2.46
LSM4-204ENST00000594828 CCDC27Q2M243 656 aa30.38■■■□□ 2.45
LSM4-204ENST00000594828 ISCA1Q9BUE6 129 aa30.37■■■□□ 2.45
LSM4-204ENST00000594828 SNED1Q8TER0 1413 aa30.37■■■□□ 2.45
LSM4-204ENST00000594828 ZNF428Q96B54 188 aa30.36■■■□□ 2.45
LSM4-204ENST00000594828 CHMP4AQ9BY43 222 aa30.36■■■□□ 2.45
LSM4-204ENST00000594828 TMX4Q9H1E5 349 aaPredicted RBP30.36■■■□□ 2.45
LSM4-204ENST00000594828 CEP350Q5VT06 3117 aa30.36■■■□□ 2.45
LSM4-204ENST00000594828 ATP5J2-PTCD1G3V325 749 aa30.35■■■□□ 2.45
LSM4-204ENST00000594828 WWC1Q8IX03 1113 aa30.35■■■□□ 2.45
LSM4-204ENST00000594828 RIC3Q7Z5B4 369 aa30.34■■■□□ 2.45
LSM4-204ENST00000594828 JDP2Q8WYK2 163 aa30.34■■■□□ 2.45
LSM4-204ENST00000594828 PHAXQ9H814 394 aaKnown RBP30.34■■■□□ 2.45
LSM4-204ENST00000594828 ABCC4O15439 1325 aa30.33■■■□□ 2.45
LSM4-204ENST00000594828 GOLGA2Q08379 1002 aa30.33■■■□□ 2.45
LSM4-204ENST00000594828 ATP6V0A2Q9Y487 856 aa30.33■■■□□ 2.45
LSM4-204ENST00000594828 FZD9O00144 591 aa30.32■■■□□ 2.44
LSM4-204ENST00000594828 BBOX1O75936 387 aa30.32■■■□□ 2.44
LSM4-204ENST00000594828 CCDC30Q5VVM6 783 aa30.32■■■□□ 2.44
LSM4-204ENST00000594828 DDX46Q7L014 1031 aaKnown RBP30.32■■■□□ 2.44
LSM4-204ENST00000594828 ZNF541Q9H0D2 1346 aa30.31■■■□□ 2.44
LSM4-204ENST00000594828 TRIM28Q13263 835 aaKnown RBP30.31■■■□□ 2.44
LSM4-204ENST00000594828 NCBP3Q53F19 620 aaKnown RBP30.31■■■□□ 2.44
LSM4-204ENST00000594828 SLC51AQ86UW1 340 aa30.31■■■□□ 2.44
LSM4-204ENST00000594828 TSPYL6Q8N831 410 aa30.31■■■□□ 2.44
LSM4-204ENST00000594828 TSR2Q969E8 191 aaKnown RBP30.31■■■□□ 2.44
LSM4-204ENST00000594828 FAM89AQ96GI7 184 aa30.31■■■□□ 2.44
LSM4-204ENST00000594828 L3MBTL3Q96JM7 780 aaPredicted RBP30.31■■■□□ 2.44
LSM4-204ENST00000594828 IQCA1LA6NCM1 817 aa30.3■■■□□ 2.44
LSM4-204ENST00000594828 DNAJC5GQ8N7S2 189 aa30.3■■■□□ 2.44
LSM4-204ENST00000594828 HTRA3P83110 453 aa30.28■■■□□ 2.44
LSM4-204ENST00000594828 SP8Q8IXZ3 490 aa30.28■■■□□ 2.44
LSM4-204ENST00000594828 LARGE2Q8N3Y3 721 aa30.28■■■□□ 2.44
LSM4-204ENST00000594828 GRAPQ13588 217 aa30.27■■■□□ 2.44
LSM4-204ENST00000594828 GRAPLQ8TC17 118 aaPredicted RBP30.27■■■□□ 2.44
LSM4-204ENST00000594828 LAMB2P55268 1798 aa30.27■■■□□ 2.44
LSM4-204ENST00000594828 IL16Q14005 1332 aa30.26■■■□□ 2.44
LSM4-204ENST00000594828 RTL5Q5HYW3 569 aaPredicted RBP30.26■■■□□ 2.43
LSM4-204ENST00000594828 DDX58O95786 925 aaKnown RBP30.25■■■□□ 2.43
LSM4-204ENST00000594828 EIF6P56537 245 aaKnown RBP30.25■■■□□ 2.43
LSM4-204ENST00000594828 GPC2Q8N158 579 aa30.25■■■□□ 2.43
LSM4-204ENST00000594828 MYD88Q99836 296 aa30.25■■■□□ 2.43
LSM4-204ENST00000594828 TAF1DQ9H5J8 278 aaPredicted RBP30.25■■■□□ 2.43
LSM4-204ENST00000594828 SF3B3Q15393 1217 aaKnown RBP30.24■■■□□ 2.43
LSM4-204ENST00000594828 CHADLQ6NUI6 762 aa30.24■■■□□ 2.43
LSM4-204ENST00000594828 SUPT20HQ8NEM7 779 aa30.24■■■□□ 2.43
LSM4-204ENST00000594828 VPS33BQ9H267 617 aa30.24■■■□□ 2.43
LSM4-204ENST00000594828 HACL1Q9UJ83 578 aa30.24■■■□□ 2.43
LSM4-204ENST00000594828 SALL2Q9Y467 1007 aaPredicted RBP30.24■■■□□ 2.43
LSM4-204ENST00000594828 IRS4O14654 1257 aaPredicted RBP30.23■■■□□ 2.43
LSM4-204ENST00000594828 POTEIP0CG38 1075 aa30.23■■■□□ 2.43
LSM4-204ENST00000594828 POTEJP0CG39 1038 aa30.23■■■□□ 2.43
LSM4-204ENST00000594828 TWISTNBQ3B726 338 aaPredicted RBP30.23■■■□□ 2.43
LSM4-204ENST00000594828 STK31Q9BXU1 1019 aa30.23■■■□□ 2.43
LSM4-204ENST00000594828 SCN4AP35499 1836 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms