RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PRPF40BQ6NWY9 871 aaKnown RBP19.95■□□□□ 0.78
PRKCSH-217ENST00000592741 UBE3BQ7Z3V4 1068 aa19.95■□□□□ 0.78
PRKCSH-217ENST00000592741 KCNB2Q92953 911 aa19.95■□□□□ 0.78
PRKCSH-217ENST00000592741 WDR33Q9C0J8 1336 aaKnown RBP19.95■□□□□ 0.78
PRKCSH-217ENST00000592741 NMIQ13287 307 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 ZSCAN23Q3MJ62 389 aa19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 BOLA2Q9H3K6 86 aa19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 A0A087WZG4 1122 aa19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 RFX5P48382 616 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 GPT2Q8TD30 523 aa19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 FSD1Q9BTV5 496 aa19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 TM6SF1Q9BZW5 370 aa19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 COL5A2P05997 1499 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-217ENST00000592741 ERVV-2B6SEH9 535 aa19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 ATP5J2-PTCD1G3V325 749 aa19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 PTCD1O75127 700 aaKnown RBP19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 MBD3O95983 291 aa19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 RUFY3Q7L099 469 aa19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 JAKMIP1Q96N16 626 aaKnown RBP19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 SOS2Q07890 1332 aaPredicted RBP19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 UBR2Q8IWV8 1755 aa19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 ZKSCAN1P17029 563 aaPredicted RBP19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 JARID2Q92833 1246 aaPredicted RBP19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 FAM227BQ96M60 508 aa19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 SNRKQ9NRH2 765 aa19.93■□□□□ 0.78
PRKCSH-217ENST00000592741 KCNJ4P48050 445 aa19.92■□□□□ 0.78
PRKCSH-217ENST00000592741 PTPN12Q05209 780 aaKnown RBP19.92■□□□□ 0.78
PRKCSH-217ENST00000592741 NECTIN1Q15223 517 aa19.92■□□□□ 0.78
PRKCSH-217ENST00000592741 VPS53Q5VIR6 699 aa19.92■□□□□ 0.78
PRKCSH-217ENST00000592741 CHAMP1Q96JM3 812 aa19.92■□□□□ 0.78
PRKCSH-217ENST00000592741 RBM8AQ9Y5S9 174 aaKnown RBP19.92■□□□□ 0.78
PRKCSH-217ENST00000592741 CYP46A1Q9Y6A2 500 aa19.92■□□□□ 0.78
PRKCSH-217ENST00000592741 PDRG1Q9NUG6 133 aa19.91■□□□□ 0.78
PRKCSH-217ENST00000592741 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
PRKCSH-217ENST00000592741 TNNI3KQ59H18 835 aa19.91■□□□□ 0.78
PRKCSH-217ENST00000592741 ZSWIM6Q9HCJ5 1215 aa19.91■□□□□ 0.78
PRKCSH-217ENST00000592741 FPGT-TNNI3KV9GXZ4 949 aa19.91■□□□□ 0.78
PRKCSH-217ENST00000592741 RPAP1Q9BWH6 1393 aaPredicted RBP19.91■□□□□ 0.78
PRKCSH-217ENST00000592741 IL2RBP14784 551 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 NASPP49321 788 aaPredicted RBP19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 CASP7P55210 303 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 CREB3L3Q68CJ9 461 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 MAP4K1Q92918 833 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 ABCA3Q99758 1704 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 NBPF26B4DH59 902 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 TFCP2Q12800 502 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 NKX1-1Q15270 411 aaPredicted RBP19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 NBPF14Q5TI25 921 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 NBPF10Q6P3W6 841 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 NBPF15Q8N660 670 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 ZSCAN31Q96LW9 406 aaPredicted RBP19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 CARD10Q9BWT7 1032 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 SLAIN2Q9P270 581 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
PRKCSH-217ENST00000592741 A0A0D9SFI3 127 aa19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 CPA1P15085 419 aa19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 ATP5JP18859 108 aa19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 ADCK5Q3MIX3 580 aa19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 NUP188Q5SRE5 1749 aa19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 RRAGDQ9NQL2 400 aaPredicted RBP19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 MED23Q9ULK4 1368 aa19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 SMC3Q9UQE7 1217 aa19.89■□□□□ 0.77
PRKCSH-217ENST00000592741 ANP32BQ92688 251 aaKnown RBP19.88■□□□□ 0.77
PRKCSH-217ENST00000592741 SH2B1Q9NRF2 756 aaPredicted RBP19.88■□□□□ 0.77
PRKCSH-217ENST00000592741 RBM27Q9P2N5 1060 aaKnown RBP19.88■□□□□ 0.77
PRKCSH-217ENST00000592741 DBNLQ9UJU6 430 aaKnown RBP19.88■□□□□ 0.77
PRKCSH-217ENST00000592741 PSMA5P28066 241 aa19.88■□□□□ 0.77
PRKCSH-217ENST00000592741 RNF20Q5VTR2 975 aa19.88■□□□□ 0.77
PRKCSH-217ENST00000592741 RFX7Q2KHR2 1363 aa19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 H7C1W4 665 aa19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 LARP6Q9BRS8 491 aaKnown RBP19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 CWC25Q9NXE8 425 aaPredicted RBP19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 SHANK3Q9BYB0 1731 aa19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 SLC27A2O14975 620 aa19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 CCDC173Q0VFZ6 552 aa19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 LMBR1LQ6UX01 489 aa19.87■□□□□ 0.77
PRKCSH-217ENST00000592741 TTLL7Q6ZT98 887 aa19.86■□□□□ 0.77
PRKCSH-217ENST00000592741 TRIM44Q96DX7 344 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-217ENST00000592741 TMEM63CQ9P1W3 806 aa19.86■□□□□ 0.77
PRKCSH-217ENST00000592741 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
PRKCSH-217ENST00000592741 JCADQ9P266 1359 aa19.86■□□□□ 0.77
PRKCSH-217ENST00000592741 ZSCAN22P10073 491 aaPredicted RBP19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 DDX54Q8TDD1 881 aaKnown RBP19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 CHMP3Q9Y3E7 222 aa19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 TNS2Q63HR2 1409 aa19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 STX6O43752 255 aa19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 LARGE1O95461 756 aa19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 FOXO4P98177 505 aa19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 CCDC83Q8IWF9 413 aa19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 NSFL1CQ9UNZ2 370 aaKnown RBP19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 TJP1Q07157 1748 aa19.85■□□□□ 0.77
PRKCSH-217ENST00000592741 SYAP1Q96A49 352 aaPredicted RBP19.84■□□□□ 0.77
PRKCSH-217ENST00000592741 STRN4Q9NRL3 753 aa19.84■□□□□ 0.77
PRKCSH-217ENST00000592741 HMG20BQ9P0W2 317 aa19.84■□□□□ 0.77
PRKCSH-217ENST00000592741 A1BGP04217 495 aa19.84■□□□□ 0.77
PRKCSH-217ENST00000592741 SYT1P21579 422 aa19.84■□□□□ 0.77
PRKCSH-217ENST00000592741 EVA1CP58658 441 aa19.84■□□□□ 0.77
PRKCSH-217ENST00000592741 LRSAM1Q6UWE0 723 aa19.84■□□□□ 0.77
PRKCSH-217ENST00000592741 DBNDD2Q9BQY9 259 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms