RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 EVI5LQ96CN4 794 aa21.32■■□□□ 1
SPC24-206ENST00000592540 DDX19AQ9NUU7 478 aaKnown RBP21.32■■□□□ 1
SPC24-206ENST00000592540 GOLGA6L4A6NEF3 574 aa21.32■■□□□ 1
SPC24-206ENST00000592540 TDRD7Q8NHU6 1098 aaKnown RBP21.32■■□□□ 1
SPC24-206ENST00000592540 GPATCH3Q96I76 525 aa21.32■■□□□ 1
SPC24-206ENST00000592540 RGPD8O14715 1765 aaPredicted RBP21.31■■□□□ 1
SPC24-206ENST00000592540 NPHP3Q7Z494 1330 aa21.31■■□□□ 1
SPC24-206ENST00000592540 KCNJ4P48050 445 aa21.31■■□□□ 1
SPC24-206ENST00000592540 MAP4K1Q92918 833 aa21.31■■□□□ 1
SPC24-206ENST00000592540 SPATA32Q96LK8 384 aa21.31■■□□□ 1
SPC24-206ENST00000592540 CLSTN2Q9H4D0 955 aa21.31■■□□□ 1
SPC24-206ENST00000592540 CHPF2Q9P2E5 772 aa21.31■■□□□ 1
SPC24-206ENST00000592540 TMEM2Q9UHN6 1383 aa21.31■■□□□ 1
SPC24-206ENST00000592540 IFIT2P09913 472 aaKnown RBP21.3■■□□□ 1
SPC24-206ENST00000592540 PSMA5P28066 241 aa21.3■■□□□ 1
SPC24-206ENST00000592540 MTX1Q13505 466 aa21.3■■□□□ 1
SPC24-206ENST00000592540 COL9A3Q14050 684 aaPredicted RBP21.3■■□□□ 1
SPC24-206ENST00000592540 TFIP11Q9UBB9 837 aaKnown RBP21.3■■□□□ 1
SPC24-206ENST00000592540 ADGRL3Q9HAR2 1447 aa21.3■■□□□ 1
SPC24-206ENST00000592540 TNNT1P13805 278 aa21.3■■□□□ 1
SPC24-206ENST00000592540 LEO1Q8WVC0 666 aaPredicted RBP21.3■■□□□ 1
SPC24-206ENST00000592540 SLC27A2O14975 620 aa21.29■■□□□ 1
SPC24-206ENST00000592540 HOXC9P31274 260 aa21.29■■□□□ 1
SPC24-206ENST00000592540 OGFRQ9NZT2 677 aa21.29■■□□□ 1
SPC24-206ENST00000592540 UBR1Q8IWV7 1749 aa21.29■■□□□ 1
SPC24-206ENST00000592540 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
SPC24-206ENST00000592540 FAM227BQ96M60 508 aa21.29■■□□□ 1
SPC24-206ENST00000592540 PAXBP1Q9Y5B6 917 aa21.28■■□□□ 1
SPC24-206ENST00000592540 DIP2BQ9P265 1576 aa21.28■■□□□ 1
SPC24-206ENST00000592540 TSPOAP1O95153 1857 aa21.28■■□□□ 1
SPC24-206ENST00000592540 EIF4A1P60842 406 aaKnown RBP21.28■■□□□ 1
SPC24-206ENST00000592540 NMIQ13287 307 aaPredicted RBP21.28■■□□□ 1
SPC24-206ENST00000592540 ANKRD1Q15327 319 aa21.28■■□□□ 1
SPC24-206ENST00000592540 LARP1Q6PKG0 1096 aaKnown RBP21.28■■□□□ 1
SPC24-206ENST00000592540 CTNNA3Q9UI47 895 aa21.28■■□□□ 1
SPC24-206ENST00000592540 ZNF165P49910 485 aa21.27■■□□□ 1
SPC24-206ENST00000592540 BLOC1S2Q6QNY1 142 aa21.27■■□□□ 1
SPC24-206ENST00000592540 ADCY9O60503 1353 aa21.27■■□□□ 1
SPC24-206ENST00000592540 HIP1O00291 1037 aa21.27■□□□□ 0.99
SPC24-206ENST00000592540 NR1I2O75469 434 aa21.27■□□□□ 0.99
SPC24-206ENST00000592540 ERC1Q8IUD2 1116 aa21.27■□□□□ 0.99
SPC24-206ENST00000592540 CACTINQ8WUQ7 758 aaKnown RBP21.27■□□□□ 0.99
SPC24-206ENST00000592540 TCEANC2Q96MN5 208 aa21.27■□□□□ 0.99
SPC24-206ENST00000592540 CLIP2Q9UDT6 1046 aa21.27■□□□□ 0.99
SPC24-206ENST00000592540 PA2G4Q9UQ80 394 aaKnown RBP21.27■□□□□ 0.99
SPC24-206ENST00000592540 KDM3BQ7LBC6 1761 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 HOXB7P09629 217 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 NLRP6P59044 892 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 AACSQ86V21 672 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 DNAJC25Q9H1X3 360 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 ALDH8A1Q9H2A2 487 aaPredicted RBP21.26■□□□□ 0.99
SPC24-206ENST00000592540 RPS6KB1P23443 525 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 TPD52L1Q16890 204 aaPredicted RBP21.26■□□□□ 0.99
SPC24-206ENST00000592540 CCDC112Q8NEF3 446 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 CEMIPQ8WUJ3 1361 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 LTV1Q96GA3 475 aaPredicted RBP21.26■□□□□ 0.99
SPC24-206ENST00000592540 PGBD1Q96JS3 809 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 SNRKQ9NRH2 765 aa21.26■□□□□ 0.99
SPC24-206ENST00000592540 ANXA1P04083 346 aa21.25■□□□□ 0.99
SPC24-206ENST00000592540 TOB2Q14106 344 aaPredicted RBP21.25■□□□□ 0.99
SPC24-206ENST00000592540 CGNQ9P2M7 1197 aaKnown RBP21.25■□□□□ 0.99
SPC24-206ENST00000592540 MARF1Q9Y4F3 1742 aaKnown RBP21.25■□□□□ 0.99
SPC24-206ENST00000592540 NPHP4O75161 1426 aaPredicted RBP21.25■□□□□ 0.99
SPC24-206ENST00000592540 CCDC144BQ3MJ40 725 aa21.24■□□□□ 0.99
SPC24-206ENST00000592540 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
SPC24-206ENST00000592540 CCDC144CPQ8IYA2 1237 aa21.24■□□□□ 0.99
SPC24-206ENST00000592540 CDC25BP30305 580 aa21.24■□□□□ 0.99
SPC24-206ENST00000592540 NAA30Q147X3 362 aaPredicted RBP21.24■□□□□ 0.99
SPC24-206ENST00000592540 BICD2Q8TD16 824 aa21.24■□□□□ 0.99
SPC24-206ENST00000592540 CHMP4AQ9BY43 222 aa21.24■□□□□ 0.99
SPC24-206ENST00000592540 ESF1Q9H501 851 aaKnown RBP21.24■□□□□ 0.99
SPC24-206ENST00000592540 TNRQ92752 1358 aa21.24■□□□□ 0.99
SPC24-206ENST00000592540 TAF6LQ9Y6J9 622 aa21.23■□□□□ 0.99
SPC24-206ENST00000592540 MED1Q15648 1581 aaPredicted RBP21.23■□□□□ 0.99
SPC24-206ENST00000592540 A0A0D9SFI3 127 aa21.23■□□□□ 0.99
SPC24-206ENST00000592540 IGSF3O75054 1194 aa21.23■□□□□ 0.99
SPC24-206ENST00000592540 C9orf78Q9NZ63 289 aaPredicted RBP21.23■□□□□ 0.99
SPC24-206ENST00000592540 CAVIN2O95810 425 aa21.22■□□□□ 0.99
SPC24-206ENST00000592540 STK3Q13188 491 aa21.22■□□□□ 0.99
SPC24-206ENST00000592540 USHBP1Q8N6Y0 703 aa21.22■□□□□ 0.99
SPC24-206ENST00000592540 DDX41Q9UJV9 622 aaKnown RBP21.22■□□□□ 0.99
SPC24-206ENST00000592540 KCNQ3O43525 872 aa21.21■□□□□ 0.99
SPC24-206ENST00000592540 FAM69CQ0P6D2 419 aa21.21■□□□□ 0.99
SPC24-206ENST00000592540 CEP135Q66GS9 1140 aa21.21■□□□□ 0.99
SPC24-206ENST00000592540 LGR6Q9HBX8 967 aa21.21■□□□□ 0.99
SPC24-206ENST00000592540 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
SPC24-206ENST00000592540 GIGYF1O75420 1035 aaPredicted RBP21.21■□□□□ 0.99
SPC24-206ENST00000592540 NUTM2GQ5VZR2 741 aa21.21■□□□□ 0.99
SPC24-206ENST00000592540 EAF2Q96CJ1 260 aaPredicted RBP21.21■□□□□ 0.99
SPC24-206ENST00000592540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.21■□□□□ 0.99
SPC24-206ENST00000592540 ALDH1L1O75891 902 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 SASH1O94885 1247 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 SARM1Q6SZW1 724 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 LRRC8AQ8IWT6 810 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 MED23Q9ULK4 1368 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 LTKP29376 864 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 RESTQ13127 1097 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 IQCB1Q15051 598 aa21.2■□□□□ 0.98
SPC24-206ENST00000592540 CCDC8Q9H0W5 538 aaPredicted RBP21.2■□□□□ 0.98
SPC24-206ENST00000592540 MAP3K2Q9Y2U5 619 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms