RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 C7orf43Q8WVR3 580 aa21.84■■□□□ 1.09
AP3D1-212ENST00000592488 UTP14AQ9BVJ6 771 aaKnown RBP21.84■■□□□ 1.09
AP3D1-212ENST00000592488 NMRK2Q9NPI5 230 aa21.84■■□□□ 1.09
AP3D1-212ENST00000592488 RNF123Q5XPI4 1314 aa21.83■■□□□ 1.09
AP3D1-212ENST00000592488 SENP3-EIF4A1A0A087X0R7 540 aa21.83■■□□□ 1.09
AP3D1-212ENST00000592488 TCIRG1Q13488 830 aa21.83■■□□□ 1.09
AP3D1-212ENST00000592488 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.09
AP3D1-212ENST00000592488 CCDC93Q567U6 631 aa21.83■■□□□ 1.09
AP3D1-212ENST00000592488 WWC1Q8IX03 1113 aa21.83■■□□□ 1.09
AP3D1-212ENST00000592488 ELL2O00472 640 aaPredicted RBP21.82■■□□□ 1.08
AP3D1-212ENST00000592488 NLRP10Q86W26 655 aa21.82■■□□□ 1.08
AP3D1-212ENST00000592488 PLBD2Q8NHP8 589 aa21.82■■□□□ 1.08
AP3D1-212ENST00000592488 RPGRQ92834 1020 aaKnown RBP21.82■■□□□ 1.08
AP3D1-212ENST00000592488 ANKRD13DQ6ZTN6 518 aa21.81■■□□□ 1.08
AP3D1-212ENST00000592488 C8orf58Q8NAV2 365 aa21.81■■□□□ 1.08
AP3D1-212ENST00000592488 CHMP4AQ9BY43 222 aa21.81■■□□□ 1.08
AP3D1-212ENST00000592488 HOXA10P31260 410 aaPredicted RBP21.8■■□□□ 1.08
AP3D1-212ENST00000592488 TSR2Q969E8 191 aaKnown RBP21.8■■□□□ 1.08
AP3D1-212ENST00000592488 DICER1Q9UPY3 1922 aaKnown RBP21.8■■□□□ 1.08
AP3D1-212ENST00000592488 IL16Q14005 1332 aa21.8■■□□□ 1.08
AP3D1-212ENST00000592488 SLC10A5Q5PT55 438 aa21.79■■□□□ 1.08
AP3D1-212ENST00000592488 NLRP3Q96P20 1036 aa21.79■■□□□ 1.08
AP3D1-212ENST00000592488 C3orf67Q6ZVT6 689 aa21.78■■□□□ 1.08
AP3D1-212ENST00000592488 RTKN2Q8IZC4 609 aa21.78■■□□□ 1.08
AP3D1-212ENST00000592488 RBM17Q96I25 401 aaKnown RBP21.78■■□□□ 1.08
AP3D1-212ENST00000592488 TRMT112Q9UI30 125 aaKnown RBP21.78■■□□□ 1.08
AP3D1-212ENST00000592488 GLTPD2A6NH11 291 aa21.77■■□□□ 1.08
AP3D1-212ENST00000592488 TOMM70O94826 608 aa21.77■■□□□ 1.08
AP3D1-212ENST00000592488 FKBP4Q02790 459 aaKnown RBP eCLIP21.77■■□□□ 1.08
AP3D1-212ENST00000592488 GOLGA2Q08379 1002 aa21.77■■□□□ 1.08
AP3D1-212ENST00000592488 OLFM4Q6UX06 510 aa21.77■■□□□ 1.08
AP3D1-212ENST00000592488 CRAMP1Q96RY5 1269 aa21.77■■□□□ 1.08
AP3D1-212ENST00000592488 SH3TC1Q8TE82 1336 aa21.77■■□□□ 1.07
AP3D1-212ENST00000592488 CCDC30Q5VVM6 783 aa21.76■■□□□ 1.07
AP3D1-212ENST00000592488 TSPYL6Q8N831 410 aa21.76■■□□□ 1.07
AP3D1-212ENST00000592488 ISCA1Q9BUE6 129 aa21.76■■□□□ 1.07
AP3D1-212ENST00000592488 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
AP3D1-212ENST00000592488 FAM9BQ8IZU0 186 aa21.75■■□□□ 1.07
AP3D1-212ENST00000592488 PHAXQ9H814 394 aaKnown RBP21.75■■□□□ 1.07
AP3D1-212ENST00000592488 RRAGCQ9HB90 399 aa21.75■■□□□ 1.07
AP3D1-212ENST00000592488 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
AP3D1-212ENST00000592488 HCLS1P14317 486 aaPredicted RBP21.74■■□□□ 1.07
AP3D1-212ENST00000592488 CC2D2BQ6DHV5 1058 aa21.74■■□□□ 1.07
AP3D1-212ENST00000592488 RIC3Q7Z5B4 369 aa21.74■■□□□ 1.07
AP3D1-212ENST00000592488 SALL2Q9Y467 1007 aaPredicted RBP21.74■■□□□ 1.07
AP3D1-212ENST00000592488 LAMB2P55268 1798 aa21.74■■□□□ 1.07
AP3D1-212ENST00000592488 SNED1Q8TER0 1413 aa21.73■■□□□ 1.07
AP3D1-212ENST00000592488 PPEF1O14829 653 aaPredicted RBP21.73■■□□□ 1.07
AP3D1-212ENST00000592488 DPY19L2Q6NUT2 758 aa21.73■■□□□ 1.07
AP3D1-212ENST00000592488 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
AP3D1-212ENST00000592488 SYNE4Q8N205 404 aa21.73■■□□□ 1.07
AP3D1-212ENST00000592488 TRIM28Q13263 835 aaKnown RBP21.72■■□□□ 1.07
AP3D1-212ENST00000592488 TWISTNBQ3B726 338 aaPredicted RBP21.72■■□□□ 1.07
AP3D1-212ENST00000592488 RBM46Q8TBY0 533 aaKnown RBP21.72■■□□□ 1.07
AP3D1-212ENST00000592488 PSMD1Q99460 953 aa21.72■■□□□ 1.07
AP3D1-212ENST00000592488 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
AP3D1-212ENST00000592488 DDX58O95786 925 aaKnown RBP21.71■■□□□ 1.07
AP3D1-212ENST00000592488 HSPA6P17066 643 aa21.71■■□□□ 1.07
AP3D1-212ENST00000592488 GRIPAP1Q4V328 841 aa21.71■■□□□ 1.07
AP3D1-212ENST00000592488 ZNF428Q96B54 188 aa21.71■■□□□ 1.07
AP3D1-212ENST00000592488 STK31Q9BXU1 1019 aa21.71■■□□□ 1.07
AP3D1-212ENST00000592488 ABCC4O15439 1325 aa21.71■■□□□ 1.07
AP3D1-212ENST00000592488 FANCIQ9NVI1 1328 aa21.71■■□□□ 1.07
AP3D1-212ENST00000592488 VEGFAP15692 232 aaPredicted RBP21.7■■□□□ 1.06
AP3D1-212ENST00000592488 DDX60Q8IY21 1712 aaKnown RBP21.69■■□□□ 1.06
AP3D1-212ENST00000592488 WDR90Q96KV7 1748 aa21.69■■□□□ 1.06
AP3D1-212ENST00000592488 IARSP41252 1262 aaKnown RBP21.69■■□□□ 1.06
AP3D1-212ENST00000592488 FAM89AQ96GI7 184 aa21.69■■□□□ 1.06
AP3D1-212ENST00000592488 TCERG1O14776 1098 aaKnown RBP21.68■■□□□ 1.06
AP3D1-212ENST00000592488 DDX46Q7L014 1031 aaKnown RBP21.68■■□□□ 1.06
AP3D1-212ENST00000592488 MYD88Q99836 296 aa21.68■■□□□ 1.06
AP3D1-212ENST00000592488 TMX4Q9H1E5 349 aaPredicted RBP21.68■■□□□ 1.06
AP3D1-212ENST00000592488 ATP6V0A2Q9Y487 856 aa21.68■■□□□ 1.06
AP3D1-212ENST00000592488 BBOX1O75936 387 aa21.66■■□□□ 1.06
AP3D1-212ENST00000592488 FSTL1Q12841 308 aa21.66■■□□□ 1.06
AP3D1-212ENST00000592488 SLC51AQ86UW1 340 aa21.66■■□□□ 1.06
AP3D1-212ENST00000592488 METTL22Q9BUU2 404 aaPredicted RBP21.66■■□□□ 1.06
AP3D1-212ENST00000592488 IRS4O14654 1257 aaPredicted RBP21.65■■□□□ 1.06
AP3D1-212ENST00000592488 DDNO94850 711 aaPredicted RBP21.65■■□□□ 1.06
AP3D1-212ENST00000592488 GRAPQ13588 217 aa21.65■■□□□ 1.06
AP3D1-212ENST00000592488 RTL5Q5HYW3 569 aaPredicted RBP21.65■■□□□ 1.06
AP3D1-212ENST00000592488 CCDC191Q8NCU4 936 aa21.65■■□□□ 1.06
AP3D1-212ENST00000592488 GRAPLQ8TC17 118 aaPredicted RBP21.65■■□□□ 1.06
AP3D1-212ENST00000592488 MAP3K2Q9Y2U5 619 aa21.65■■□□□ 1.06
AP3D1-212ENST00000592488 POTECB2RU33 542 aa21.64■■□□□ 1.05
AP3D1-212ENST00000592488 SF3B3Q15393 1217 aaKnown RBP21.64■■□□□ 1.05
AP3D1-212ENST00000592488 KSR2Q6VAB6 950 aa21.64■■□□□ 1.05
AP3D1-212ENST00000592488 ZBTB38Q8NAP3 1195 aaPredicted RBP21.64■■□□□ 1.05
AP3D1-212ENST00000592488 JDP2Q8WYK2 163 aa21.64■■□□□ 1.05
AP3D1-212ENST00000592488 CWC25Q9NXE8 425 aaPredicted RBP21.64■■□□□ 1.05
AP3D1-212ENST00000592488 ZNF541Q9H0D2 1346 aa21.63■■□□□ 1.05
AP3D1-212ENST00000592488 PI4KAP2A4QPH2 592 aa21.63■■□□□ 1.05
AP3D1-212ENST00000592488 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
AP3D1-212ENST00000592488 HSP90B1P14625 803 aaKnown RBP21.63■■□□□ 1.05
AP3D1-212ENST00000592488 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
AP3D1-212ENST00000592488 TMC4Q7Z404 712 aa21.63■■□□□ 1.05
AP3D1-212ENST00000592488 SP8Q8IXZ3 490 aa21.63■■□□□ 1.05
AP3D1-212ENST00000592488 PI4KAP1Q8N8J0 262 aa21.63■■□□□ 1.05
AP3D1-212ENST00000592488 SMC1BQ8NDV3 1235 aa21.63■■□□□ 1.05
AP3D1-212ENST00000592488 MYH16Q9H6N6 1097 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms