RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 RASEFQ8IZ41 740 aa23.85■■□□□ 1.41
MBD3-209ENST00000592012 TMOD3Q9NYL9 352 aa23.85■■□□□ 1.41
MBD3-209ENST00000592012 TOGARAM1Q9Y4F4 1720 aa23.84■■□□□ 1.41
MBD3-209ENST00000592012 FOXO4P98177 505 aa23.84■■□□□ 1.41
MBD3-209ENST00000592012 BOLA2Q9H3K6 86 aa23.84■■□□□ 1.41
MBD3-209ENST00000592012 CWC25Q9NXE8 425 aaPredicted RBP23.84■■□□□ 1.41
MBD3-209ENST00000592012 NUP188Q5SRE5 1749 aa23.84■■□□□ 1.41
MBD3-209ENST00000592012 SKOR2Q2VWA4 1001 aaPredicted RBP23.84■■□□□ 1.41
MBD3-209ENST00000592012 ZDHHC9Q9Y397 364 aa23.84■■□□□ 1.41
MBD3-209ENST00000592012 LMBR1LQ6UX01 489 aa23.83■■□□□ 1.41
MBD3-209ENST00000592012 PTH1RQ03431 593 aa23.83■■□□□ 1.4
MBD3-209ENST00000592012 TFCP2Q12800 502 aa23.83■■□□□ 1.4
MBD3-209ENST00000592012 INTS4Q96HW7 963 aaKnown RBP23.83■■□□□ 1.4
MBD3-209ENST00000592012 FSD2A1L4K1 749 aa23.82■■□□□ 1.4
MBD3-209ENST00000592012 ZBTB3Q9H5J0 574 aa23.82■■□□□ 1.4
MBD3-209ENST00000592012 GOLGA6L22H0YM25 854 aa23.81■■□□□ 1.4
MBD3-209ENST00000592012 HIP1O00291 1037 aa23.81■■□□□ 1.4
MBD3-209ENST00000592012 TNNI3KQ59H18 835 aa23.81■■□□□ 1.4
MBD3-209ENST00000592012 CCDC191Q8NCU4 936 aa23.81■■□□□ 1.4
MBD3-209ENST00000592012 PIGBQ92521 554 aa23.81■■□□□ 1.4
MBD3-209ENST00000592012 DBNLQ9UJU6 430 aaKnown RBP23.81■■□□□ 1.4
MBD3-209ENST00000592012 FPGT-TNNI3KV9GXZ4 949 aa23.81■■□□□ 1.4
MBD3-209ENST00000592012 NOL8Q76FK4 1167 aaKnown RBP23.81■■□□□ 1.4
MBD3-209ENST00000592012 BRPF3Q9ULD4 1205 aa23.81■■□□□ 1.4
MBD3-209ENST00000592012 ASAP1Q9ULH1 1129 aa23.8■■□□□ 1.4
MBD3-209ENST00000592012 L1TD1Q5T7N2 865 aaKnown RBP23.8■■□□□ 1.4
MBD3-209ENST00000592012 FAM227BQ96M60 508 aa23.8■■□□□ 1.4
MBD3-209ENST00000592012 TTC14Q96N46 770 aa23.8■■□□□ 1.4
MBD3-209ENST00000592012 SNRKQ9NRH2 765 aa23.79■■□□□ 1.4
MBD3-209ENST00000592012 NMIQ13287 307 aaPredicted RBP23.79■■□□□ 1.4
MBD3-209ENST00000592012 KCNB2Q92953 911 aa23.79■■□□□ 1.4
MBD3-209ENST00000592012 ATP5JP18859 108 aa23.78■■□□□ 1.4
MBD3-209ENST00000592012 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
MBD3-209ENST00000592012 GOLGA6L3A6NEY3 463 aa23.78■■□□□ 1.4
MBD3-209ENST00000592012 CCDC171Q6TFL3 1326 aa23.77■■□□□ 1.4
MBD3-209ENST00000592012 TJP1Q07157 1748 aa23.77■■□□□ 1.4
MBD3-209ENST00000592012 FSD1Q9BTV5 496 aa23.77■■□□□ 1.4
MBD3-209ENST00000592012 TEX13AQ9BXU3 409 aaPredicted RBP23.77■■□□□ 1.4
MBD3-209ENST00000592012 ATG3Q9NT62 314 aa23.77■■□□□ 1.4
MBD3-209ENST00000592012 NECTIN1Q15223 517 aa23.77■■□□□ 1.4
MBD3-209ENST00000592012 DISP2A7MBM2 1401 aa23.76■■□□□ 1.39
MBD3-209ENST00000592012 MCTP1Q6DN14 999 aa23.76■■□□□ 1.39
MBD3-209ENST00000592012 CHMP3Q9Y3E7 222 aa23.76■■□□□ 1.39
MBD3-209ENST00000592012 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
MBD3-209ENST00000592012 DNAJC10Q8IXB1 793 aa23.76■■□□□ 1.39
MBD3-209ENST00000592012 MAP4K1Q92918 833 aa23.76■■□□□ 1.39
MBD3-209ENST00000592012 ISCA1Q9BUE6 129 aa23.76■■□□□ 1.39
MBD3-209ENST00000592012 COL14A1Q05707 1796 aaKnown RBP23.75■■□□□ 1.39
MBD3-209ENST00000592012 A0A0D9SFI3 127 aa23.75■■□□□ 1.39
MBD3-209ENST00000592012 ATG9AQ7Z3C6 839 aa23.75■■□□□ 1.39
MBD3-209ENST00000592012 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
MBD3-209ENST00000592012 DBNDD2Q9BQY9 259 aa23.74■■□□□ 1.39
MBD3-209ENST00000592012 ITGB4P16144 1822 aa23.74■■□□□ 1.39
MBD3-209ENST00000592012 AK2P54819 239 aa23.74■■□□□ 1.39
MBD3-209ENST00000592012 TCIRG1Q13488 830 aa23.74■■□□□ 1.39
MBD3-209ENST00000592012 EDC3Q96F86 508 aaKnown RBP23.74■■□□□ 1.39
MBD3-209ENST00000592012 BRD1O95696 1058 aa23.73■■□□□ 1.39
MBD3-209ENST00000592012 CASTP20810 708 aaKnown RBP23.73■■□□□ 1.39
MBD3-209ENST00000592012 TM6SF1Q9BZW5 370 aa23.73■■□□□ 1.39
MBD3-209ENST00000592012 KLHL40Q2TBA0 621 aa23.73■■□□□ 1.39
MBD3-209ENST00000592012 ADCK5Q3MIX3 580 aa23.73■■□□□ 1.39
MBD3-209ENST00000592012 LMBRD1Q9NUN5 540 aa23.73■■□□□ 1.39
MBD3-209ENST00000592012 RBM8AQ9Y5S9 174 aaKnown RBP23.73■■□□□ 1.39
MBD3-209ENST00000592012 KAT6BQ8WYB5 2073 aa23.73■■□□□ 1.39
MBD3-209ENST00000592012 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
MBD3-209ENST00000592012 XRCC6P12956 609 aaKnown RBP eCLIP23.72■■□□□ 1.39
MBD3-209ENST00000592012 STARD3NLO95772 234 aa23.72■■□□□ 1.39
MBD3-209ENST00000592012 TRIM28Q13263 835 aaKnown RBP23.72■■□□□ 1.39
MBD3-209ENST00000592012 RUFY3Q7L099 469 aa23.72■■□□□ 1.39
MBD3-209ENST00000592012 ZSWIM6Q9HCJ5 1215 aa23.72■■□□□ 1.39
MBD3-209ENST00000592012 LIMCH1Q9UPQ0 1083 aa23.72■■□□□ 1.39
MBD3-209ENST00000592012 MED23Q9ULK4 1368 aa23.72■■□□□ 1.39
MBD3-209ENST00000592012 CPA1P15085 419 aa23.71■■□□□ 1.39
MBD3-209ENST00000592012 ZNF330Q9Y3S2 320 aaPredicted RBP23.71■■□□□ 1.39
MBD3-209ENST00000592012 DDX49Q9Y6V7 483 aaKnown RBP23.71■■□□□ 1.39
MBD3-209ENST00000592012 CREB3L3Q68CJ9 461 aa23.71■■□□□ 1.39
MBD3-209ENST00000592012 JAKMIP1Q96N16 626 aaKnown RBP23.71■■□□□ 1.39
MBD3-209ENST00000592012 ZKSCAN1P17029 563 aaPredicted RBP23.7■■□□□ 1.38
MBD3-209ENST00000592012 IL15P40933 162 aaPredicted RBP23.7■■□□□ 1.38
MBD3-209ENST00000592012 HAUS7Q99871 368 aa23.7■■□□□ 1.38
MBD3-209ENST00000592012 GPR108Q9NPR9 543 aa23.7■■□□□ 1.38
MBD3-209ENST00000592012 BCL9O00512 1426 aa23.7■■□□□ 1.38
MBD3-209ENST00000592012 VPS53Q5VIR6 699 aa23.7■■□□□ 1.38
MBD3-209ENST00000592012 ARXQ96QS3 562 aa23.7■■□□□ 1.38
MBD3-209ENST00000592012 ISY1Q9ULR0 285 aaKnown RBP23.7■■□□□ 1.38
MBD3-209ENST00000592012 NDUFB9Q9Y6M9 179 aa23.7■■□□□ 1.38
MBD3-209ENST00000592012 EXOC5O00471 708 aa23.69■■□□□ 1.38
MBD3-209ENST00000592012 EYA2O00167 538 aa23.69■■□□□ 1.38
MBD3-209ENST00000592012 ZNF589Q86UQ0 364 aaPredicted RBP23.69■■□□□ 1.38
MBD3-209ENST00000592012 ZNF594Q96JF6 807 aaPredicted RBP23.69■■□□□ 1.38
MBD3-209ENST00000592012 AHDC1Q5TGY3 1603 aaPredicted RBP23.68■■□□□ 1.38
MBD3-209ENST00000592012 COL16A1Q07092 1604 aaPredicted RBP23.68■■□□□ 1.38
MBD3-209ENST00000592012 COL22A1Q8NFW1 1626 aaPredicted RBP23.68■■□□□ 1.38
MBD3-209ENST00000592012 KCNJ4P48050 445 aa23.68■■□□□ 1.38
MBD3-209ENST00000592012 LRRC24Q50LG9 513 aa23.68■■□□□ 1.38
MBD3-209ENST00000592012 FOXD4L5Q5VV16 416 aaPredicted RBP23.68■■□□□ 1.38
MBD3-209ENST00000592012 KIF6Q6ZMV9 814 aa23.68■■□□□ 1.38
MBD3-209ENST00000592012 FOXD4L4Q8WXT5 416 aaPredicted RBP23.68■■□□□ 1.38
MBD3-209ENST00000592012 SLC4A9Q96Q91 983 aa23.68■■□□□ 1.38
MBD3-209ENST00000592012 LARP6Q9BRS8 491 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms