RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
LINC01539-205ENST00000591974 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
LINC01539-205ENST00000591974 ERC1Q8IUD2 1116 aa13.04□□□□□ -0.32
LINC01539-205ENST00000591974 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
LINC01539-205ENST00000591974 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
LINC01539-205ENST00000591974 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
LINC01539-205ENST00000591974 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
LINC01539-205ENST00000591974 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
LINC01539-205ENST00000591974 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
LINC01539-205ENST00000591974 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
LINC01539-205ENST00000591974 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
LINC01539-205ENST00000591974 RGL2O15211 777 aa13.02□□□□□ -0.32
LINC01539-205ENST00000591974 NLRP10Q86W26 655 aa13.02□□□□□ -0.32
LINC01539-205ENST00000591974 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.32
LINC01539-205ENST00000591974 JARID2Q92833 1246 aaPredicted RBP13.02□□□□□ -0.32
LINC01539-205ENST00000591974 SALL3Q9BXA9 1300 aa13.02□□□□□ -0.32
LINC01539-205ENST00000591974 LAMB2P55268 1798 aa13.02□□□□□ -0.33
LINC01539-205ENST00000591974 AK9Q5TCS8 1911 aa13.02□□□□□ -0.33
LINC01539-205ENST00000591974 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
LINC01539-205ENST00000591974 FOXO4P98177 505 aa13.02□□□□□ -0.33
LINC01539-205ENST00000591974 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
LINC01539-205ENST00000591974 PLA2G12BQ9BX93 195 aa13.02□□□□□ -0.33
LINC01539-205ENST00000591974 CDHR2Q9BYE9 1310 aa13.01□□□□□ -0.33
LINC01539-205ENST00000591974 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
LINC01539-205ENST00000591974 TTC22Q5TAA0 569 aa13.01□□□□□ -0.33
LINC01539-205ENST00000591974 OTUD7AQ8TE49 926 aaPredicted RBP13.01□□□□□ -0.33
LINC01539-205ENST00000591974 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
LINC01539-205ENST00000591974 EP400Q96L91 3159 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 C4AP0C0L4 1744 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 AOX1Q06278 1338 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 GPTP24298 496 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 PDE1AP54750 535 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 G3BP1Q13283 466 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01539-205ENST00000591974 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 PA2G4Q9UQ80 394 aaKnown RBP13□□□□□ -0.33
LINC01539-205ENST00000591974 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 UBR3Q6ZT12 1888 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
LINC01539-205ENST00000591974 RPS6KA4O75676 772 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 MX1P20591 662 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 RXRBP28702 533 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 RFX5P48382 616 aaPredicted RBP12.99□□□□□ -0.33
LINC01539-205ENST00000591974 KCNQ4P56696 695 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 CLEC4GQ6UXB4 293 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
LINC01539-205ENST00000591974 PTPN12Q05209 780 aaKnown RBP12.99□□□□□ -0.33
LINC01539-205ENST00000591974 PARP10Q53GL7 1025 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
LINC01539-205ENST00000591974 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
LINC01539-205ENST00000591974 DDX60Q8IY21 1712 aaKnown RBP12.98□□□□□ -0.33
LINC01539-205ENST00000591974 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
LINC01539-205ENST00000591974 CLASRPQ8N2M8 674 aaKnown RBP12.98□□□□□ -0.33
LINC01539-205ENST00000591974 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
LINC01539-205ENST00000591974 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
LINC01539-205ENST00000591974 COL24A1Q17RW2 1714 aa12.98□□□□□ -0.33
LINC01539-205ENST00000591974 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
LINC01539-205ENST00000591974 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
LINC01539-205ENST00000591974 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
LINC01539-205ENST00000591974 GNPATO15228 680 aa12.97□□□□□ -0.33
LINC01539-205ENST00000591974 TRIM37O94972 964 aa12.97□□□□□ -0.33
LINC01539-205ENST00000591974 AK7Q96M32 723 aa12.97□□□□□ -0.33
LINC01539-205ENST00000591974 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
LINC01539-205ENST00000591974 RTCBQ9Y3I0 505 aaKnown RBP12.97□□□□□ -0.33
LINC01539-205ENST00000591974 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.33
LINC01539-205ENST00000591974 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.33
LINC01539-205ENST00000591974 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
LINC01539-205ENST00000591974 SASH1O94885 1247 aa12.96□□□□□ -0.33
LINC01539-205ENST00000591974 CSF1RP07333 972 aa12.96□□□□□ -0.33
LINC01539-205ENST00000591974 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
LINC01539-205ENST00000591974 SIL1Q9H173 461 aa12.96□□□□□ -0.33
LINC01539-205ENST00000591974 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
LINC01539-205ENST00000591974 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.34
LINC01539-205ENST00000591974 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.34
LINC01539-205ENST00000591974 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
LINC01539-205ENST00000591974 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
LINC01539-205ENST00000591974 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
LINC01539-205ENST00000591974 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC01539-205ENST00000591974 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 PDE8AO60658 829 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 CDC45O75419 566 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
LINC01539-205ENST00000591974 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
LINC01539-205ENST00000591974 CTSWP56202 376 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 CCDC57Q2TAC2 916 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 UPF2Q9HAU5 1272 aaKnown RBP12.95□□□□□ -0.34
LINC01539-205ENST00000591974 LRRC4BQ9NT99 713 aa12.95□□□□□ -0.34
LINC01539-205ENST00000591974 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
LINC01539-205ENST00000591974 CIAO1O76071 339 aa12.94□□□□□ -0.34
LINC01539-205ENST00000591974 SEC24BO95487 1268 aa12.94□□□□□ -0.34
LINC01539-205ENST00000591974 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
LINC01539-205ENST00000591974 GPATCH3Q96I76 525 aa12.94□□□□□ -0.34
LINC01539-205ENST00000591974 ZPR1O75312 459 aa12.93□□□□□ -0.34
LINC01539-205ENST00000591974 NTSR2O95665 410 aa12.93□□□□□ -0.34
LINC01539-205ENST00000591974 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
LINC01539-205ENST00000591974 SDSP20132 328 aa12.93□□□□□ -0.34
LINC01539-205ENST00000591974 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
LINC01539-205ENST00000591974 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms