RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 EPS15P42566 896 aa13.67□□□□□ -0.22
SDF2-209ENST00000591903 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
SDF2-209ENST00000591903 NIP7Q9Y221 180 aaKnown RBP eCLIP13.67□□□□□ -0.22
SDF2-209ENST00000591903 TRAF5O00463 557 aa13.66□□□□□ -0.22
SDF2-209ENST00000591903 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
SDF2-209ENST00000591903 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
SDF2-209ENST00000591903 COL4A5P29400 1685 aa13.66□□□□□ -0.22
SDF2-209ENST00000591903 GTF2E1P29083 439 aaPredicted RBP13.65□□□□□ -0.22
SDF2-209ENST00000591903 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
SDF2-209ENST00000591903 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
SDF2-209ENST00000591903 IL17REQ8NFR9 667 aa13.65□□□□□ -0.22
SDF2-209ENST00000591903 ADARB2Q9NS39 739 aaKnown RBP13.65□□□□□ -0.22
SDF2-209ENST00000591903 AKAP11Q9UKA4 1901 aa13.64□□□□□ -0.23
SDF2-209ENST00000591903 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
SDF2-209ENST00000591903 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
SDF2-209ENST00000591903 NOGQ13253 232 aa13.64□□□□□ -0.23
SDF2-209ENST00000591903 PRPF38BQ5VTL8 546 aaKnown RBP13.64□□□□□ -0.23
SDF2-209ENST00000591903 NYXQ9GZU5 481 aa13.64□□□□□ -0.23
SDF2-209ENST00000591903 NUP98P52948 1817 aa13.64□□□□□ -0.23
SDF2-209ENST00000591903 BTBD11A6QL63 1104 aa13.63□□□□□ -0.23
SDF2-209ENST00000591903 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
SDF2-209ENST00000591903 NIM1KQ8IY84 436 aa13.63□□□□□ -0.23
SDF2-209ENST00000591903 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
SDF2-209ENST00000591903 GPRC5DQ9NZD1 345 aa13.63□□□□□ -0.23
SDF2-209ENST00000591903 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
SDF2-209ENST00000591903 RIC1Q4ADV7 1423 aa13.63□□□□□ -0.23
SDF2-209ENST00000591903 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
SDF2-209ENST00000591903 SNRPA1P09661 255 aaKnown RBP13.62□□□□□ -0.23
SDF2-209ENST00000591903 CIAPIN1Q6FI81 312 aa13.62□□□□□ -0.23
SDF2-209ENST00000591903 ZC3H15Q8WU90 426 aaKnown RBP13.62□□□□□ -0.23
SDF2-209ENST00000591903 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
SDF2-209ENST00000591903 LAMB4A4D0S4 1761 aa13.62□□□□□ -0.23
SDF2-209ENST00000591903 HOXA10P31260 410 aaPredicted RBP13.61□□□□□ -0.23
SDF2-209ENST00000591903 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
SDF2-209ENST00000591903 SAGE1Q9NXZ1 904 aa13.61□□□□□ -0.23
SDF2-209ENST00000591903 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
SDF2-209ENST00000591903 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
SDF2-209ENST00000591903 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
SDF2-209ENST00000591903 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
SDF2-209ENST00000591903 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
SDF2-209ENST00000591903 KCNQ3O43525 872 aa13.59□□□□□ -0.23
SDF2-209ENST00000591903 DDX10Q13206 875 aaKnown RBP13.59□□□□□ -0.23
SDF2-209ENST00000591903 CDC37L1Q7L3B6 337 aa13.59□□□□□ -0.23
SDF2-209ENST00000591903 CRAMP1Q96RY5 1269 aa13.59□□□□□ -0.23
SDF2-209ENST00000591903 GLIS2Q9BZE0 524 aaPredicted RBP13.59□□□□□ -0.23
SDF2-209ENST00000591903 ABCC12Q96J65 1359 aa13.58□□□□□ -0.23
SDF2-209ENST00000591903 PPEF1O14829 653 aaPredicted RBP13.58□□□□□ -0.24
SDF2-209ENST00000591903 SOX10P56693 466 aa13.58□□□□□ -0.24
SDF2-209ENST00000591903 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
SDF2-209ENST00000591903 RBM17Q96I25 401 aaKnown RBP13.58□□□□□ -0.24
SDF2-209ENST00000591903 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
SDF2-209ENST00000591903 HLFQ16534 295 aa13.57□□□□□ -0.24
SDF2-209ENST00000591903 ZNRF3Q9ULT6 936 aa13.57□□□□□ -0.24
SDF2-209ENST00000591903 COL3A1P02461 1466 aaPredicted RBP13.56□□□□□ -0.24
SDF2-209ENST00000591903 PRAMEF22A3QJZ6 481 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 ERVV-1B6SEH8 477 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
SDF2-209ENST00000591903 GMPSP49915 693 aaPredicted RBP13.56□□□□□ -0.24
SDF2-209ENST00000591903 HUNKP57058 714 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 CXCL9Q07325 125 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 RALBP1Q15311 655 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 AOC3Q16853 763 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
SDF2-209ENST00000591903 NUTM1Q86Y26 1132 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
SDF2-209ENST00000591903 POLR2AP24928 1970 aaKnown RBP13.56□□□□□ -0.24
SDF2-209ENST00000591903 TNIP1Q15025 636 aa13.55□□□□□ -0.24
SDF2-209ENST00000591903 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
SDF2-209ENST00000591903 BCL2L13Q9BXK5 485 aa13.55□□□□□ -0.24
SDF2-209ENST00000591903 RGMBQ6NW40 437 aa13.54□□□□□ -0.24
SDF2-209ENST00000591903 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
SDF2-209ENST00000591903 RTFDC1Q9BY42 306 aaPredicted RBP13.54□□□□□ -0.24
SDF2-209ENST00000591903 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
SDF2-209ENST00000591903 ANKRD36CQ5JPF3 1778 aa13.53□□□□□ -0.24
SDF2-209ENST00000591903 FAM155AB1AL88 458 aaPredicted RBP13.53□□□□□ -0.24
SDF2-209ENST00000591903 H7C1D1 291 aa13.53□□□□□ -0.24
SDF2-209ENST00000591903 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
SDF2-209ENST00000591903 CTU1Q7Z7A3 348 aaKnown RBP13.53□□□□□ -0.24
SDF2-209ENST00000591903 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
SDF2-209ENST00000591903 ZIC5Q96T25 663 aa13.53□□□□□ -0.24
SDF2-209ENST00000591903 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
SDF2-209ENST00000591903 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.25
SDF2-209ENST00000591903 PKN2Q16513 984 aaKnown RBP13.52□□□□□ -0.25
SDF2-209ENST00000591903 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
SDF2-209ENST00000591903 RNF186Q9NXI6 227 aa13.52□□□□□ -0.25
SDF2-209ENST00000591903 TCERG1O14776 1098 aaKnown RBP13.51□□□□□ -0.25
SDF2-209ENST00000591903 TRPA1O75762 1119 aa13.51□□□□□ -0.25
SDF2-209ENST00000591903 KIF23Q02241 960 aaPredicted RBP13.51□□□□□ -0.25
SDF2-209ENST00000591903 KIAA2012Q0VF49 1180 aa13.51□□□□□ -0.25
SDF2-209ENST00000591903 PPP1R42Q7Z4L9 355 aa13.51□□□□□ -0.25
SDF2-209ENST00000591903 TRPM4Q8TD43 1214 aa13.51□□□□□ -0.25
SDF2-209ENST00000591903 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
SDF2-209ENST00000591903 GBA2Q9HCG7 927 aaPredicted RBP13.51□□□□□ -0.25
SDF2-209ENST00000591903 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
SDF2-209ENST00000591903 LAMB2P55268 1798 aa13.5□□□□□ -0.25
SDF2-209ENST00000591903 UBN2Q6ZU65 1347 aa13.5□□□□□ -0.25
SDF2-209ENST00000591903 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
SDF2-209ENST00000591903 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms