RNA–Protein interactions for RNA: ENST00000591190.5

CXXC1-215, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-215ENST00000591190 PPP1R42Q7Z4L9 355 aa20.46■□□□□ 0.87
CXXC1-215ENST00000591190 C7orf43Q8WVR3 580 aa20.46■□□□□ 0.87
CXXC1-215ENST00000591190 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
CXXC1-215ENST00000591190 RNF123Q5XPI4 1314 aa20.46■□□□□ 0.87
CXXC1-215ENST00000591190 KDM2BQ8NHM5 1336 aa20.46■□□□□ 0.87
CXXC1-215ENST00000591190 WDR90Q96KV7 1748 aa20.45■□□□□ 0.86
CXXC1-215ENST00000591190 CCDC93Q567U6 631 aa20.45■□□□□ 0.86
CXXC1-215ENST00000591190 TCIRG1Q13488 830 aa20.43■□□□□ 0.86
CXXC1-215ENST00000591190 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
CXXC1-215ENST00000591190 NLRP10Q86W26 655 aa20.43■□□□□ 0.86
CXXC1-215ENST00000591190 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
CXXC1-215ENST00000591190 PLBD2Q8NHP8 589 aa20.43■□□□□ 0.86
CXXC1-215ENST00000591190 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
CXXC1-215ENST00000591190 HYPKQ9NX55 129 aa20.43■□□□□ 0.86
CXXC1-215ENST00000591190 CEP350Q5VT06 3117 aa20.42■□□□□ 0.86
CXXC1-215ENST00000591190 ALDH1B1P30837 517 aa20.42■□□□□ 0.86
CXXC1-215ENST00000591190 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
CXXC1-215ENST00000591190 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
CXXC1-215ENST00000591190 RPGRQ92834 1020 aaKnown RBP20.42■□□□□ 0.86
CXXC1-215ENST00000591190 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
CXXC1-215ENST00000591190 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
CXXC1-215ENST00000591190 TSR2Q969E8 191 aaKnown RBP20.41■□□□□ 0.86
CXXC1-215ENST00000591190 IL16Q14005 1332 aa20.41■□□□□ 0.86
CXXC1-215ENST00000591190 GLTPD2A6NH11 291 aa20.4■□□□□ 0.86
CXXC1-215ENST00000591190 ELL2O00472 640 aaPredicted RBP20.4■□□□□ 0.86
CXXC1-215ENST00000591190 FKBP4Q02790 459 aaKnown RBP eCLIP20.4■□□□□ 0.86
CXXC1-215ENST00000591190 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
CXXC1-215ENST00000591190 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.86
CXXC1-215ENST00000591190 TOMM70O94826 608 aa20.39■□□□□ 0.85
CXXC1-215ENST00000591190 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
CXXC1-215ENST00000591190 TSPYL6Q8N831 410 aa20.38■□□□□ 0.85
CXXC1-215ENST00000591190 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
CXXC1-215ENST00000591190 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
CXXC1-215ENST00000591190 SH3TC1Q8TE82 1336 aa20.37■□□□□ 0.85
CXXC1-215ENST00000591190 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
CXXC1-215ENST00000591190 RTKN2Q8IZC4 609 aa20.37■□□□□ 0.85
CXXC1-215ENST00000591190 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
CXXC1-215ENST00000591190 NLRP3Q96P20 1036 aa20.37■□□□□ 0.85
CXXC1-215ENST00000591190 PHAXQ9H814 394 aaKnown RBP20.37■□□□□ 0.85
CXXC1-215ENST00000591190 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
CXXC1-215ENST00000591190 COL4A5P29400 1685 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 ABCC4O15439 1325 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
CXXC1-215ENST00000591190 HSPA6P17066 643 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 CCDC30Q5VVM6 783 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 SLC51AQ86UW1 340 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 SYNE4Q8N205 404 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 RRAGCQ9HB90 399 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 TAF1P21675 1872 aa20.36■□□□□ 0.85
CXXC1-215ENST00000591190 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
CXXC1-215ENST00000591190 HCLS1P14317 486 aaPredicted RBP20.35■□□□□ 0.85
CXXC1-215ENST00000591190 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
CXXC1-215ENST00000591190 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
CXXC1-215ENST00000591190 PSMD1Q99460 953 aa20.35■□□□□ 0.85
CXXC1-215ENST00000591190 ZNF277Q9NRM2 450 aaPredicted RBP20.35■□□□□ 0.85
CXXC1-215ENST00000591190 ATP5J2-PTCD1G3V325 749 aa20.34■□□□□ 0.85
CXXC1-215ENST00000591190 CC2D2BQ6DHV5 1058 aa20.34■□□□□ 0.85
CXXC1-215ENST00000591190 ZNF428Q96B54 188 aa20.34■□□□□ 0.85
CXXC1-215ENST00000591190 CHMP4AQ9BY43 222 aa20.34■□□□□ 0.85
CXXC1-215ENST00000591190 COL4A1P02462 1669 aa20.34■□□□□ 0.85
CXXC1-215ENST00000591190 RIC3Q7Z5B4 369 aa20.33■□□□□ 0.85
CXXC1-215ENST00000591190 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
CXXC1-215ENST00000591190 CACNA1FO60840 1977 aa20.33■□□□□ 0.84
CXXC1-215ENST00000591190 SCN4AP35499 1836 aa20.32■□□□□ 0.84
CXXC1-215ENST00000591190 IARSP41252 1262 aaKnown RBP20.32■□□□□ 0.84
CXXC1-215ENST00000591190 TRIM28Q13263 835 aaKnown RBP20.32■□□□□ 0.84
CXXC1-215ENST00000591190 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
CXXC1-215ENST00000591190 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
CXXC1-215ENST00000591190 DUOX1Q9NRD9 1551 aa20.32■□□□□ 0.84
CXXC1-215ENST00000591190 VEGFAP15692 232 aaPredicted RBP20.31■□□□□ 0.84
CXXC1-215ENST00000591190 WDR63Q8IWG1 891 aa20.31■□□□□ 0.84
CXXC1-215ENST00000591190 SALL2Q9Y467 1007 aaPredicted RBP20.31■□□□□ 0.84
CXXC1-215ENST00000591190 ZNF541Q9H0D2 1346 aa20.3■□□□□ 0.84
CXXC1-215ENST00000591190 POTECB2RU33 542 aa20.3■□□□□ 0.84
CXXC1-215ENST00000591190 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
CXXC1-215ENST00000591190 GRIPAP1Q4V328 841 aa20.3■□□□□ 0.84
CXXC1-215ENST00000591190 FAM89AQ96GI7 184 aa20.3■□□□□ 0.84
CXXC1-215ENST00000591190 MYD88Q99836 296 aa20.3■□□□□ 0.84
CXXC1-215ENST00000591190 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
CXXC1-215ENST00000591190 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
CXXC1-215ENST00000591190 FSTL1Q12841 308 aa20.29■□□□□ 0.84
CXXC1-215ENST00000591190 STK31Q9BXU1 1019 aa20.29■□□□□ 0.84
CXXC1-215ENST00000591190 MYH3P11055 1940 aa20.29■□□□□ 0.84
CXXC1-215ENST00000591190 TCERG1O14776 1098 aaKnown RBP20.28■□□□□ 0.84
CXXC1-215ENST00000591190 DDNO94850 711 aaPredicted RBP20.28■□□□□ 0.84
CXXC1-215ENST00000591190 GRAPQ13588 217 aa20.28■□□□□ 0.84
CXXC1-215ENST00000591190 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
CXXC1-215ENST00000591190 GRAPLQ8TC17 118 aaPredicted RBP20.28■□□□□ 0.84
CXXC1-215ENST00000591190 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
CXXC1-215ENST00000591190 ADAMTSL1Q8N6G6 1762 aa20.27■□□□□ 0.84
CXXC1-215ENST00000591190 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
CXXC1-215ENST00000591190 ZBTB38Q8NAP3 1195 aaPredicted RBP20.27■□□□□ 0.84
CXXC1-215ENST00000591190 CCDC191Q8NCU4 936 aa20.27■□□□□ 0.84
CXXC1-215ENST00000591190 L3MBTL3Q96JM7 780 aaPredicted RBP20.27■□□□□ 0.84
CXXC1-215ENST00000591190 FZD9O00144 591 aa20.26■□□□□ 0.83
CXXC1-215ENST00000591190 IRS4O14654 1257 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-215ENST00000591190 SF3B3Q15393 1217 aaKnown RBP20.26■□□□□ 0.83
CXXC1-215ENST00000591190 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
CXXC1-215ENST00000591190 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-215ENST00000591190 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms