RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
PTPN2-210ENST00000591115 CCDC87Q9NVE4 849 aa12.28□□□□□ -0.44
PTPN2-210ENST00000591115 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
PTPN2-210ENST00000591115 ZNF330Q9Y3S2 320 aaPredicted RBP12.28□□□□□ -0.44
PTPN2-210ENST00000591115 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
PTPN2-210ENST00000591115 CNTNAP4Q9C0A0 1308 aa12.28□□□□□ -0.44
PTPN2-210ENST00000591115 GRM8O00222 908 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 SMARCA5O60264 1052 aaPredicted RBP12.27□□□□□ -0.44
PTPN2-210ENST00000591115 GSPT1P15170 499 aaKnown RBP12.27□□□□□ -0.44
PTPN2-210ENST00000591115 BECN1Q14457 450 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 SLC27A3Q5K4L6 730 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.44
PTPN2-210ENST00000591115 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 COPS6Q7L5N1 327 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.44
PTPN2-210ENST00000591115 CAMKK2Q96RR4 588 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 C22orf23Q9BZE7 217 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 EXOC6BQ9Y2D4 811 aa12.27□□□□□ -0.44
PTPN2-210ENST00000591115 AOX1Q06278 1338 aa12.27□□□□□ -0.45
PTPN2-210ENST00000591115 SALL3Q9BXA9 1300 aa12.27□□□□□ -0.45
PTPN2-210ENST00000591115 NUP98P52948 1817 aa12.27□□□□□ -0.45
PTPN2-210ENST00000591115 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 BAG6P46379 1132 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
PTPN2-210ENST00000591115 PDE1AP54750 535 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 MFAP1P55081 439 aaKnown RBP12.26□□□□□ -0.45
PTPN2-210ENST00000591115 TBC1D9Q6ZT07 1266 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 AMIGO3Q86WK7 504 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 STAP2Q9UGK3 403 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 QSER1Q2KHR3 1735 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 COL15A1P39059 1388 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 AIMP1Q12904 312 aaKnown RBP12.26□□□□□ -0.45
PTPN2-210ENST00000591115 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
PTPN2-210ENST00000591115 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
PTPN2-210ENST00000591115 NEURL1BA8MQ27 555 aa12.25□□□□□ -0.45
PTPN2-210ENST00000591115 APBB1O00213 710 aa12.25□□□□□ -0.45
PTPN2-210ENST00000591115 GNPATO15228 680 aa12.25□□□□□ -0.45
PTPN2-210ENST00000591115 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
PTPN2-210ENST00000591115 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
PTPN2-210ENST00000591115 CWF19L2Q2TBE0 894 aaKnown RBP12.25□□□□□ -0.45
PTPN2-210ENST00000591115 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
PTPN2-210ENST00000591115 OTUD7AQ8TE49 926 aaPredicted RBP12.25□□□□□ -0.45
PTPN2-210ENST00000591115 UPF1Q92900 1129 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTPN2-210ENST00000591115 SURF6O75683 361 aaKnown RBP12.24□□□□□ -0.45
PTPN2-210ENST00000591115 MX1P20591 662 aa12.24□□□□□ -0.45
PTPN2-210ENST00000591115 GCKRQ14397 625 aa12.24□□□□□ -0.45
PTPN2-210ENST00000591115 TTLL7Q6ZT98 887 aa12.24□□□□□ -0.45
PTPN2-210ENST00000591115 AK7Q96M32 723 aa12.24□□□□□ -0.45
PTPN2-210ENST00000591115 ANO8Q9HCE9 1232 aaPredicted RBP12.24□□□□□ -0.45
PTPN2-210ENST00000591115 PHF14O94880 888 aa12.23□□□□□ -0.45
PTPN2-210ENST00000591115 SDSP20132 328 aa12.23□□□□□ -0.45
PTPN2-210ENST00000591115 ERC1Q8IUD2 1116 aa12.23□□□□□ -0.45
PTPN2-210ENST00000591115 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
PTPN2-210ENST00000591115 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
PTPN2-210ENST00000591115 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
PTPN2-210ENST00000591115 CCDC125Q86Z20 511 aa12.22□□□□□ -0.45
PTPN2-210ENST00000591115 MYD88Q99836 296 aa12.22□□□□□ -0.45
PTPN2-210ENST00000591115 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
PTPN2-210ENST00000591115 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
PTPN2-210ENST00000591115 SUCLG2Q96I99 432 aa12.22□□□□□ -0.45
PTPN2-210ENST00000591115 ARXQ96QS3 562 aa12.22□□□□□ -0.45
PTPN2-210ENST00000591115 ZBTB3Q9H5J0 574 aa12.22□□□□□ -0.45
PTPN2-210ENST00000591115 ABCB7O75027 752 aa12.21□□□□□ -0.46
PTPN2-210ENST00000591115 KAZALD1Q96I82 304 aa12.21□□□□□ -0.46
PTPN2-210ENST00000591115 TBC1D2BQ9UPU7 963 aa12.21□□□□□ -0.46
PTPN2-210ENST00000591115 USP42Q9H9J4 1324 aaKnown RBP12.21□□□□□ -0.46
PTPN2-210ENST00000591115 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
PTPN2-210ENST00000591115 KIF6Q6ZMV9 814 aa12.2□□□□□ -0.46
PTPN2-210ENST00000591115 DZIP3Q86Y13 1208 aaKnown RBP12.2□□□□□ -0.46
PTPN2-210ENST00000591115 BICC1Q9H694 974 aaKnown RBP12.2□□□□□ -0.46
PTPN2-210ENST00000591115 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
PTPN2-210ENST00000591115 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
PTPN2-210ENST00000591115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
PTPN2-210ENST00000591115 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
PTPN2-210ENST00000591115 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
PTPN2-210ENST00000591115 REC8O95072 547 aa12.19□□□□□ -0.46
PTPN2-210ENST00000591115 OS9Q13438 667 aaPredicted RBP12.19□□□□□ -0.46
PTPN2-210ENST00000591115 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
PTPN2-210ENST00000591115 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
PTPN2-210ENST00000591115 SNX21Q969T3 373 aa12.19□□□□□ -0.46
PTPN2-210ENST00000591115 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
PTPN2-210ENST00000591115 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
PTPN2-210ENST00000591115 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
PTPN2-210ENST00000591115 PNPLA7Q6ZV29 1317 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 CAMTA2O94983 1202 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 SSFA2P28290 1259 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 HLFQ16534 295 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 CCDC191Q8NCU4 936 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 IL1RAPL2Q9NP60 686 aa12.18□□□□□ -0.46
PTPN2-210ENST00000591115 A0A087WZG4 1122 aa12.17□□□□□ -0.46
PTPN2-210ENST00000591115 H7C1W4 665 aa12.17□□□□□ -0.46
PTPN2-210ENST00000591115 ERC2O15083 957 aa12.17□□□□□ -0.46
PTPN2-210ENST00000591115 EPB41L2O43491 1005 aaKnown RBP12.17□□□□□ -0.46
PTPN2-210ENST00000591115 CASP7P55210 303 aa12.17□□□□□ -0.46
PTPN2-210ENST00000591115 G3BP1Q13283 466 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPN2-210ENST00000591115 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms