RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPC1-211ENST00000591075 STK31Q9BXU1 1019 aa11.29□□□□□ -0.6
NPC1-211ENST00000591075 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPC1-211ENST00000591075 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
NPC1-211ENST00000591075 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
NPC1-211ENST00000591075 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
NPC1-211ENST00000591075 RRP1P56182 461 aaKnown RBP11.28□□□□□ -0.6
NPC1-211ENST00000591075 NBPF10Q6P3W6 841 aaKnown RBP11.28□□□□□ -0.6
NPC1-211ENST00000591075 TPTE2Q6XPS3 522 aa11.28□□□□□ -0.6
NPC1-211ENST00000591075 NBPF15Q8N660 670 aa11.28□□□□□ -0.6
NPC1-211ENST00000591075 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
NPC1-211ENST00000591075 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
NPC1-211ENST00000591075 ERBB4Q15303 1308 aa11.28□□□□□ -0.6
NPC1-211ENST00000591075 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 RGL2O15211 777 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 CCDC24Q8N4L8 307 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 C8orf58Q8NAV2 365 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 BRIP1Q9BX63 1249 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 PTPRCP08575 1304 aa11.27□□□□□ -0.61
NPC1-211ENST00000591075 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
NPC1-211ENST00000591075 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
NPC1-211ENST00000591075 PRR5LQ6MZQ0 368 aa11.26□□□□□ -0.61
NPC1-211ENST00000591075 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
NPC1-211ENST00000591075 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
NPC1-211ENST00000591075 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
NPC1-211ENST00000591075 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
NPC1-211ENST00000591075 KCNA3P22001 575 aa11.25□□□□□ -0.61
NPC1-211ENST00000591075 AIMP1Q12904 312 aaKnown RBP11.25□□□□□ -0.61
NPC1-211ENST00000591075 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
NPC1-211ENST00000591075 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
NPC1-211ENST00000591075 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
NPC1-211ENST00000591075 GPBP1L1Q9HC44 474 aaPredicted RBP11.25□□□□□ -0.61
NPC1-211ENST00000591075 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
NPC1-211ENST00000591075 DBF4Q9UBU7 674 aaPredicted RBP11.25□□□□□ -0.61
NPC1-211ENST00000591075 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
NPC1-211ENST00000591075 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
NPC1-211ENST00000591075 HLFQ16534 295 aa11.24□□□□□ -0.61
NPC1-211ENST00000591075 TTLL7Q6ZT98 887 aa11.24□□□□□ -0.61
NPC1-211ENST00000591075 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
NPC1-211ENST00000591075 TSPYL6Q8N831 410 aa11.24□□□□□ -0.61
NPC1-211ENST00000591075 SSUH2Q9Y2M2 353 aa11.24□□□□□ -0.61
NPC1-211ENST00000591075 ELL2O00472 640 aaPredicted RBP11.23□□□□□ -0.61
NPC1-211ENST00000591075 BCAR3O75815 825 aa11.23□□□□□ -0.61
NPC1-211ENST00000591075 GPTP24298 496 aa11.23□□□□□ -0.61
NPC1-211ENST00000591075 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
NPC1-211ENST00000591075 ATF7IPQ6VMQ6 1270 aa11.23□□□□□ -0.61
NPC1-211ENST00000591075 PPP1R42Q7Z4L9 355 aa11.23□□□□□ -0.61
NPC1-211ENST00000591075 MASTLQ96GX5 879 aa11.23□□□□□ -0.61
NPC1-211ENST00000591075 DDX58O95786 925 aaKnown RBP11.22□□□□□ -0.61
NPC1-211ENST00000591075 ANXA1P04083 346 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 SOGA3Q5TF21 947 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 STYK1Q6J9G0 422 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
NPC1-211ENST00000591075 DZIP1LQ8IYY4 767 aaKnown RBP11.22□□□□□ -0.61
NPC1-211ENST00000591075 XAGE3Q8WTP9 111 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 KIF13BQ9NQT8 1826 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 DDX21Q9NR30 783 aaKnown RBP eCLIP11.22□□□□□ -0.61
NPC1-211ENST00000591075 RNF181Q9P0P0 153 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
NPC1-211ENST00000591075 SCN7AQ01118 1682 aa11.21□□□□□ -0.61
NPC1-211ENST00000591075 NPR1P16066 1061 aa11.21□□□□□ -0.61
NPC1-211ENST00000591075 KRT24Q2M2I5 525 aa11.21□□□□□ -0.61
NPC1-211ENST00000591075 PARP10Q53GL7 1025 aa11.21□□□□□ -0.61
NPC1-211ENST00000591075 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
NPC1-211ENST00000591075 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
NPC1-211ENST00000591075 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
NPC1-211ENST00000591075 CHPF2Q9P2E5 772 aa11.21□□□□□ -0.61
NPC1-211ENST00000591075 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
NPC1-211ENST00000591075 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
NPC1-211ENST00000591075 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
NPC1-211ENST00000591075 C21orf2O43822 256 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 SRGNP10124 158 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 ALDH1B1P30837 517 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
NPC1-211ENST00000591075 RPGRQ92834 1020 aaKnown RBP11.2□□□□□ -0.62
NPC1-211ENST00000591075 UTP14AQ9BVJ6 771 aaKnown RBP11.2□□□□□ -0.62
NPC1-211ENST00000591075 DDX19BQ9UMR2 479 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 AFDNP55196 1824 aaKnown RBP11.2□□□□□ -0.62
NPC1-211ENST00000591075 LAMB4A4D0S4 1761 aa11.2□□□□□ -0.62
NPC1-211ENST00000591075 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
NPC1-211ENST00000591075 LMNB1P20700 586 aa11.19□□□□□ -0.62
NPC1-211ENST00000591075 PDIA6Q15084 440 aa11.19□□□□□ -0.62
NPC1-211ENST00000591075 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
NPC1-211ENST00000591075 ANKRD13DQ6ZTN6 518 aa11.19□□□□□ -0.62
NPC1-211ENST00000591075 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
NPC1-211ENST00000591075 KDM2BQ8NHM5 1336 aa11.18□□□□□ -0.62
NPC1-211ENST00000591075 CCT4P50991 539 aaKnown RBP11.18□□□□□ -0.62
NPC1-211ENST00000591075 RASSF7Q02833 373 aa11.18□□□□□ -0.62
NPC1-211ENST00000591075 FLIIQ13045 1269 aa11.18□□□□□ -0.62
NPC1-211ENST00000591075 ERFEQ4G0M1 354 aa11.18□□□□□ -0.62
NPC1-211ENST00000591075 SUSD4Q5VX71 490 aa11.18□□□□□ -0.62
NPC1-211ENST00000591075 RIC3Q7Z5B4 369 aa11.18□□□□□ -0.62
NPC1-211ENST00000591075 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms