RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
CXXC1-214ENST00000590901 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
CXXC1-214ENST00000590901 NEURL1BA8MQ27 555 aa18.77■□□□□ 0.6
CXXC1-214ENST00000590901 SLC4A9Q96Q91 983 aa18.77■□□□□ 0.6
CXXC1-214ENST00000590901 GRM8O00222 908 aa18.77■□□□□ 0.59
CXXC1-214ENST00000590901 USP26Q9BXU7 913 aa18.77■□□□□ 0.59
CXXC1-214ENST00000590901 MAP4K4O95819 1239 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-214ENST00000590901 TMEM63CQ9P1W3 806 aa18.76■□□□□ 0.59
CXXC1-214ENST00000590901 SYCE3A1L190 88 aa18.76■□□□□ 0.59
CXXC1-214ENST00000590901 SYTL4Q96C24 671 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-214ENST00000590901 PODXL2Q9NZ53 605 aa18.76■□□□□ 0.59
CXXC1-214ENST00000590901 ARID3AQ99856 593 aa18.75■□□□□ 0.59
CXXC1-214ENST00000590901 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
CXXC1-214ENST00000590901 ST18O60284 1047 aa18.75■□□□□ 0.59
CXXC1-214ENST00000590901 GCKRQ14397 625 aa18.75■□□□□ 0.59
CXXC1-214ENST00000590901 METTL22Q9BUU2 404 aaPredicted RBP18.75■□□□□ 0.59
CXXC1-214ENST00000590901 ZBTB3Q9H5J0 574 aa18.75■□□□□ 0.59
CXXC1-214ENST00000590901 ATG3Q9NT62 314 aa18.75■□□□□ 0.59
CXXC1-214ENST00000590901 PHLPP1O60346 1717 aa18.75■□□□□ 0.59
CXXC1-214ENST00000590901 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
CXXC1-214ENST00000590901 ALDH1L1O75891 902 aa18.74■□□□□ 0.59
CXXC1-214ENST00000590901 DNAJC10Q8IXB1 793 aa18.74■□□□□ 0.59
CXXC1-214ENST00000590901 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
CXXC1-214ENST00000590901 ZDHHC9Q9Y397 364 aa18.74■□□□□ 0.59
CXXC1-214ENST00000590901 ZGPATQ8N5A5 531 aaKnown RBP18.74■□□□□ 0.59
CXXC1-214ENST00000590901 RHPN1Q8TCX5 695 aa18.74■□□□□ 0.59
CXXC1-214ENST00000590901 CCDC94Q9BW85 323 aaPredicted RBP18.73■□□□□ 0.59
CXXC1-214ENST00000590901 UBR2Q8IWV8 1755 aa18.73■□□□□ 0.59
CXXC1-214ENST00000590901 DDX58O95786 925 aaKnown RBP18.73■□□□□ 0.59
CXXC1-214ENST00000590901 MBD3O95983 291 aa18.73■□□□□ 0.59
CXXC1-214ENST00000590901 SIL1Q9H173 461 aa18.73■□□□□ 0.59
CXXC1-214ENST00000590901 COL14A1Q05707 1796 aaKnown RBP18.72■□□□□ 0.59
CXXC1-214ENST00000590901 MX1P20591 662 aa18.72■□□□□ 0.59
CXXC1-214ENST00000590901 KIAA2012Q0VF49 1180 aa18.72■□□□□ 0.59
CXXC1-214ENST00000590901 IL25Q9H293 177 aa18.72■□□□□ 0.59
CXXC1-214ENST00000590901 A0A0G2JS52 829 aa18.72■□□□□ 0.59
CXXC1-214ENST00000590901 UBE3BQ7Z3V4 1068 aa18.72■□□□□ 0.59
CXXC1-214ENST00000590901 ITGB4P16144 1822 aa18.71■□□□□ 0.59
CXXC1-214ENST00000590901 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.59
CXXC1-214ENST00000590901 UBAP1LF5GYI3 381 aa18.71■□□□□ 0.59
CXXC1-214ENST00000590901 PTMAP06454 111 aaKnown RBP18.71■□□□□ 0.59
CXXC1-214ENST00000590901 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
CXXC1-214ENST00000590901 CHMP4AQ9BY43 222 aa18.71■□□□□ 0.59
CXXC1-214ENST00000590901 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
CXXC1-214ENST00000590901 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 EXOC5O00471 708 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 RNF214Q8ND24 703 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 MYRIPQ8NFW9 859 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 OSBPL3Q9H4L5 887 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 PRDM10Q9NQV6 1147 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 UTYO14607 1347 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 PLEKHG2Q9H7P9 1386 aa18.7■□□□□ 0.58
CXXC1-214ENST00000590901 SASH1O94885 1247 aa18.69■□□□□ 0.58
CXXC1-214ENST00000590901 MTX1Q13505 466 aa18.69■□□□□ 0.58
CXXC1-214ENST00000590901 UTP14CQ5TAP6 766 aaKnown RBP18.69■□□□□ 0.58
CXXC1-214ENST00000590901 PAPPAQ13219 1627 aa18.69■□□□□ 0.58
CXXC1-214ENST00000590901 ARFGEF2Q9Y6D5 1785 aa18.69■□□□□ 0.58
CXXC1-214ENST00000590901 PLCH1Q4KWH8 1693 aa18.68■□□□□ 0.58
CXXC1-214ENST00000590901 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
CXXC1-214ENST00000590901 CASC1Q6TDU7 716 aa18.68■□□□□ 0.58
CXXC1-214ENST00000590901 TSPY26PQ9H489 355 aa18.68■□□□□ 0.58
CXXC1-214ENST00000590901 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
CXXC1-214ENST00000590901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
CXXC1-214ENST00000590901 A0A087WZG4 1122 aa18.68■□□□□ 0.58
CXXC1-214ENST00000590901 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
CXXC1-214ENST00000590901 DMTNQ08495 405 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 NEXNQ0ZGT2 675 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 SYNE4Q8N205 404 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 MARCH10Q8NA82 808 aaPredicted RBP18.67■□□□□ 0.58
CXXC1-214ENST00000590901 PLBD2Q8NHP8 589 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 CHAMP1Q96JM3 812 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
CXXC1-214ENST00000590901 CASP7P55210 303 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 PI4K2BQ8TCG2 481 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 LAMB4A4D0S4 1761 aa18.67■□□□□ 0.58
CXXC1-214ENST00000590901 AFDNP55196 1824 aaKnown RBP18.66■□□□□ 0.58
CXXC1-214ENST00000590901 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
CXXC1-214ENST00000590901 TOM1O60784 492 aa18.66■□□□□ 0.58
CXXC1-214ENST00000590901 OS9Q13438 667 aaPredicted RBP18.66■□□□□ 0.58
CXXC1-214ENST00000590901 PTF1AQ7RTS3 328 aa18.66■□□□□ 0.58
CXXC1-214ENST00000590901 KCNQ2O43526 872 aa18.65■□□□□ 0.58
CXXC1-214ENST00000590901 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
CXXC1-214ENST00000590901 PRIMPOLQ96LW4 560 aa18.65■□□□□ 0.58
CXXC1-214ENST00000590901 REC8O95072 547 aa18.65■□□□□ 0.58
CXXC1-214ENST00000590901 SYAP1Q96A49 352 aaPredicted RBP18.65■□□□□ 0.58
CXXC1-214ENST00000590901 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
CXXC1-214ENST00000590901 C8orf37Q96NL8 207 aa18.65■□□□□ 0.58
CXXC1-214ENST00000590901 STAP2Q9UGK3 403 aa18.65■□□□□ 0.58
CXXC1-214ENST00000590901 BCL9O00512 1426 aa18.65■□□□□ 0.58
CXXC1-214ENST00000590901 KCNQ4P56696 695 aa18.64■□□□□ 0.57
CXXC1-214ENST00000590901 FOXD4L5Q5VV16 416 aaPredicted RBP18.64■□□□□ 0.57
CXXC1-214ENST00000590901 FOXD4L4Q8WXT5 416 aaPredicted RBP18.64■□□□□ 0.57
CXXC1-214ENST00000590901 EAF2Q96CJ1 260 aaPredicted RBP18.64■□□□□ 0.57
CXXC1-214ENST00000590901 CCDC8Q9H0W5 538 aaPredicted RBP18.64■□□□□ 0.57
CXXC1-214ENST00000590901 ZHX1Q9UKY1 873 aaPredicted RBP18.64■□□□□ 0.57
CXXC1-214ENST00000590901 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.57
CXXC1-214ENST00000590901 FAM182BQ5T319 152 aa18.64■□□□□ 0.57
CXXC1-214ENST00000590901 HLFQ16534 295 aa18.63■□□□□ 0.57
CXXC1-214ENST00000590901 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms