RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 LMNB1P20700 586 aa15.64■□□□□ 0.09
CTDP1-206ENST00000590635 C9orf131Q5VYM1 1079 aa15.64■□□□□ 0.09
CTDP1-206ENST00000590635 PRPF40BQ6NWY9 871 aaKnown RBP15.64■□□□□ 0.09
CTDP1-206ENST00000590635 TSPYL6Q8N831 410 aa15.64■□□□□ 0.09
CTDP1-206ENST00000590635 TRMT112Q9UI30 125 aaKnown RBP15.64■□□□□ 0.09
CTDP1-206ENST00000590635 ZC3H4Q9UPT8 1303 aaKnown RBP15.64■□□□□ 0.09
CTDP1-206ENST00000590635 ADCY9O60503 1353 aa15.63■□□□□ 0.09
CTDP1-206ENST00000590635 HOXA10P31260 410 aaPredicted RBP15.63■□□□□ 0.09
CTDP1-206ENST00000590635 GRIPAP1Q4V328 841 aa15.63■□□□□ 0.09
CTDP1-206ENST00000590635 CC2D2BQ6DHV5 1058 aa15.63■□□□□ 0.09
CTDP1-206ENST00000590635 RBM17Q96I25 401 aaKnown RBP15.63■□□□□ 0.09
CTDP1-206ENST00000590635 SH3TC1Q8TE82 1336 aa15.63■□□□□ 0.09
CTDP1-206ENST00000590635 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
CTDP1-206ENST00000590635 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
CTDP1-206ENST00000590635 ISCA1Q9BUE6 129 aa15.62■□□□□ 0.09
CTDP1-206ENST00000590635 TMX4Q9H1E5 349 aaPredicted RBP15.62■□□□□ 0.09
CTDP1-206ENST00000590635 PHAXQ9H814 394 aaKnown RBP15.62■□□□□ 0.09
CTDP1-206ENST00000590635 RNF181Q9P0P0 153 aa15.62■□□□□ 0.09
CTDP1-206ENST00000590635 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
CTDP1-206ENST00000590635 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
CTDP1-206ENST00000590635 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
CTDP1-206ENST00000590635 CRAMP1Q96RY5 1269 aa15.61■□□□□ 0.09
CTDP1-206ENST00000590635 TAOK3Q9H2K8 898 aa15.61■□□□□ 0.09
CTDP1-206ENST00000590635 LTBP3Q9NS15 1303 aa15.61■□□□□ 0.09
CTDP1-206ENST00000590635 VAMP4O75379 141 aa15.6■□□□□ 0.09
CTDP1-206ENST00000590635 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
CTDP1-206ENST00000590635 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
CTDP1-206ENST00000590635 C7orf43Q8WVR3 580 aa15.6■□□□□ 0.09
CTDP1-206ENST00000590635 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
CTDP1-206ENST00000590635 ABCC12Q96J65 1359 aa15.6■□□□□ 0.09
CTDP1-206ENST00000590635 ATP5J2-PTCD1G3V325 749 aa15.59■□□□□ 0.09
CTDP1-206ENST00000590635 NFKBIEO00221 500 aa15.59■□□□□ 0.09
CTDP1-206ENST00000590635 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
CTDP1-206ENST00000590635 NEXNQ0ZGT2 675 aa15.59■□□□□ 0.09
CTDP1-206ENST00000590635 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
CTDP1-206ENST00000590635 KSR2Q6VAB6 950 aa15.59■□□□□ 0.09
CTDP1-206ENST00000590635 METTL22Q9BUU2 404 aaPredicted RBP15.59■□□□□ 0.09
CTDP1-206ENST00000590635 KDM2BQ8NHM5 1336 aa15.59■□□□□ 0.09
CTDP1-206ENST00000590635 BBOX1O75936 387 aa15.58■□□□□ 0.08
CTDP1-206ENST00000590635 RASSF7Q02833 373 aa15.58■□□□□ 0.08
CTDP1-206ENST00000590635 ZNF521Q96K83 1311 aa15.58■□□□□ 0.08
CTDP1-206ENST00000590635 E9PSI1 815 aa15.57■□□□□ 0.08
CTDP1-206ENST00000590635 DPY19L2Q6NUT2 758 aa15.57■□□□□ 0.08
CTDP1-206ENST00000590635 DDX46Q7L014 1031 aaKnown RBP15.57■□□□□ 0.08
CTDP1-206ENST00000590635 ZBTB38Q8NAP3 1195 aaPredicted RBP15.57■□□□□ 0.08
CTDP1-206ENST00000590635 ZNF526Q8TF50 670 aaPredicted RBP15.57■□□□□ 0.08
CTDP1-206ENST00000590635 MYD88Q99836 296 aa15.57■□□□□ 0.08
CTDP1-206ENST00000590635 MAP3K2Q9Y2U5 619 aa15.57■□□□□ 0.08
CTDP1-206ENST00000590635 PI4KAP2A4QPH2 592 aa15.56■□□□□ 0.08
CTDP1-206ENST00000590635 HCLS1P14317 486 aaPredicted RBP15.56■□□□□ 0.08
CTDP1-206ENST00000590635 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
CTDP1-206ENST00000590635 TMC4Q7Z404 712 aa15.56■□□□□ 0.08
CTDP1-206ENST00000590635 PI4KAP1Q8N8J0 262 aa15.56■□□□□ 0.08
CTDP1-206ENST00000590635 FAM89AQ96GI7 184 aa15.56■□□□□ 0.08
CTDP1-206ENST00000590635 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
CTDP1-206ENST00000590635 CWC25Q9NXE8 425 aaPredicted RBP15.56■□□□□ 0.08
CTDP1-206ENST00000590635 COL11A2P13942 1736 aaPredicted RBP15.55■□□□□ 0.08
CTDP1-206ENST00000590635 FLIIQ13045 1269 aa15.55■□□□□ 0.08
CTDP1-206ENST00000590635 SF3B3Q15393 1217 aaKnown RBP15.55■□□□□ 0.08
CTDP1-206ENST00000590635 PSMD1Q99460 953 aa15.55■□□□□ 0.08
CTDP1-206ENST00000590635 IRS4O14654 1257 aaPredicted RBP15.54■□□□□ 0.08
CTDP1-206ENST00000590635 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
CTDP1-206ENST00000590635 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
CTDP1-206ENST00000590635 PCCAP05165 728 aaPredicted RBP15.54■□□□□ 0.08
CTDP1-206ENST00000590635 C1QTNF8P60827 252 aa15.54■□□□□ 0.08
CTDP1-206ENST00000590635 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
CTDP1-206ENST00000590635 ZNF428Q96B54 188 aa15.54■□□□□ 0.08
CTDP1-206ENST00000590635 ATP6V0A2Q9Y487 856 aa15.54■□□□□ 0.08
CTDP1-206ENST00000590635 SLX4Q8IY92 1834 aa15.54■□□□□ 0.08
CTDP1-206ENST00000590635 GLTPD2A6NH11 291 aa15.53■□□□□ 0.08
CTDP1-206ENST00000590635 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
CTDP1-206ENST00000590635 SP8Q8IXZ3 490 aa15.53■□□□□ 0.08
CTDP1-206ENST00000590635 SYNE4Q8N205 404 aa15.53■□□□□ 0.08
CTDP1-206ENST00000590635 VPS33BQ9H267 617 aa15.53■□□□□ 0.08
CTDP1-206ENST00000590635 ANKRD36CQ5JPF3 1778 aa15.53■□□□□ 0.08
CTDP1-206ENST00000590635 GRAPQ13588 217 aa15.52■□□□□ 0.08
CTDP1-206ENST00000590635 GRAPLQ8TC17 118 aaPredicted RBP15.52■□□□□ 0.08
CTDP1-206ENST00000590635 ABCC4O15439 1325 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 PDE8AO60658 829 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 PRELPP51888 382 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 SLFN5Q08AF3 891 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 G2E3Q7L622 706 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 C16orf71Q8IYS4 520 aaPredicted RBP15.51■□□□□ 0.07
CTDP1-206ENST00000590635 SUPT20HQ8NEM7 779 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 DNAAF4Q8WXU2 420 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 JDP2Q8WYK2 163 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 ARFGEF2Q9Y6D5 1785 aa15.51■□□□□ 0.07
CTDP1-206ENST00000590635 CDHR2Q9BYE9 1310 aa15.5■□□□□ 0.07
CTDP1-206ENST00000590635 KIF3CO14782 793 aa15.5■□□□□ 0.07
CTDP1-206ENST00000590635 TOMM70O94826 608 aa15.5■□□□□ 0.07
CTDP1-206ENST00000590635 IARSP41252 1262 aaKnown RBP15.5■□□□□ 0.07
CTDP1-206ENST00000590635 CCDC152Q4G0S7 254 aa15.5■□□□□ 0.07
CTDP1-206ENST00000590635 RTL5Q5HYW3 569 aaPredicted RBP15.5■□□□□ 0.07
CTDP1-206ENST00000590635 LINS1Q8NG48 757 aa15.5■□□□□ 0.07
CTDP1-206ENST00000590635 SBF1O95248 1867 aa15.5■□□□□ 0.07
CTDP1-206ENST00000590635 FER1L6Q2WGJ9 1857 aa15.5■□□□□ 0.07
CTDP1-206ENST00000590635 TNRC6CQ9HCJ0 1690 aaKnown RBP15.49■□□□□ 0.07
CTDP1-206ENST00000590635 NEURL1BA8MQ27 555 aa15.49■□□□□ 0.07
CTDP1-206ENST00000590635 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
CTDP1-206ENST00000590635 CT47B1P0C2W7 299 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms