RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 CTU1Q7Z7A3 348 aaKnown RBP18.17■□□□□ 0.5
LSM12-203ENST00000590563 RNF186Q9NXI6 227 aa18.17■□□□□ 0.5
LSM12-203ENST00000590563 HMOX1P09601 288 aa18.16■□□□□ 0.5
LSM12-203ENST00000590563 HUNKP57058 714 aa18.16■□□□□ 0.5
LSM12-203ENST00000590563 CC2D2BQ6DHV5 1058 aa18.16■□□□□ 0.5
LSM12-203ENST00000590563 DLK2Q6UY11 383 aa18.16■□□□□ 0.5
LSM12-203ENST00000590563 TPTE2Q6XPS3 522 aa18.16■□□□□ 0.5
LSM12-203ENST00000590563 NBPF15Q8N660 670 aa18.16■□□□□ 0.5
LSM12-203ENST00000590563 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
LSM12-203ENST00000590563 RIC1Q4ADV7 1423 aa18.15■□□□□ 0.5
LSM12-203ENST00000590563 NIM1KQ8IY84 436 aa18.15■□□□□ 0.5
LSM12-203ENST00000590563 TRPM4Q8TD43 1214 aa18.15■□□□□ 0.5
LSM12-203ENST00000590563 FAM177BA6PVY3 158 aa18.14■□□□□ 0.49
LSM12-203ENST00000590563 TRPA1O75762 1119 aa18.14■□□□□ 0.49
LSM12-203ENST00000590563 GMPSP49915 693 aaPredicted RBP18.14■□□□□ 0.49
LSM12-203ENST00000590563 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
LSM12-203ENST00000590563 NIP7Q9Y221 180 aaKnown RBP eCLIP18.14■□□□□ 0.49
LSM12-203ENST00000590563 KCNQ3O43525 872 aa18.13■□□□□ 0.49
LSM12-203ENST00000590563 CXCL9Q07325 125 aa18.13■□□□□ 0.49
LSM12-203ENST00000590563 RGMBQ6NW40 437 aa18.13■□□□□ 0.49
LSM12-203ENST00000590563 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
LSM12-203ENST00000590563 IL17REQ8NFR9 667 aa18.13■□□□□ 0.49
LSM12-203ENST00000590563 ZC3H15Q8WU90 426 aaKnown RBP18.13■□□□□ 0.49
LSM12-203ENST00000590563 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
LSM12-203ENST00000590563 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
LSM12-203ENST00000590563 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
LSM12-203ENST00000590563 AOC3Q16853 763 aa18.12■□□□□ 0.49
LSM12-203ENST00000590563 CDC37L1Q7L3B6 337 aa18.12■□□□□ 0.49
LSM12-203ENST00000590563 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
LSM12-203ENST00000590563 RGL2O15211 777 aa18.11■□□□□ 0.49
LSM12-203ENST00000590563 PPIP5K2O43314 1243 aa18.11■□□□□ 0.49
LSM12-203ENST00000590563 HOXA10P31260 410 aaPredicted RBP18.11■□□□□ 0.49
LSM12-203ENST00000590563 MORC1Q86VD1 984 aa18.11■□□□□ 0.49
LSM12-203ENST00000590563 CDHR2Q9BYE9 1310 aa18.11■□□□□ 0.49
LSM12-203ENST00000590563 SHTN1A0MZ66 631 aa18.1■□□□□ 0.49
LSM12-203ENST00000590563 FXR1P51114 621 aaKnown RBP eCLIP18.1■□□□□ 0.49
LSM12-203ENST00000590563 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
LSM12-203ENST00000590563 KIF7Q2M1P5 1343 aa18.09■□□□□ 0.49
LSM12-203ENST00000590563 TEFQ10587 303 aa18.09■□□□□ 0.49
LSM12-203ENST00000590563 HLFQ16534 295 aa18.09■□□□□ 0.49
LSM12-203ENST00000590563 GRIPAP1Q4V328 841 aa18.09■□□□□ 0.49
LSM12-203ENST00000590563 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.49
LSM12-203ENST00000590563 NBPF26B4DH59 902 aa18.08■□□□□ 0.48
LSM12-203ENST00000590563 PPEF1O14829 653 aaPredicted RBP18.08■□□□□ 0.48
LSM12-203ENST00000590563 SLC10A3P09131 477 aa18.08■□□□□ 0.48
LSM12-203ENST00000590563 NBPF10Q6P3W6 841 aaKnown RBP18.08■□□□□ 0.48
LSM12-203ENST00000590563 NUTM1Q86Y26 1132 aa18.08■□□□□ 0.48
LSM12-203ENST00000590563 CSRNP1Q96S65 589 aa18.08■□□□□ 0.48
LSM12-203ENST00000590563 PANK3Q9H999 370 aa18.08■□□□□ 0.48
LSM12-203ENST00000590563 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
LSM12-203ENST00000590563 CCDC102AQ96A19 550 aa18.07■□□□□ 0.48
LSM12-203ENST00000590563 GBA2Q9HCG7 927 aaPredicted RBP18.07■□□□□ 0.48
LSM12-203ENST00000590563 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
LSM12-203ENST00000590563 AKAP11Q9UKA4 1901 aa18.06■□□□□ 0.48
LSM12-203ENST00000590563 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
LSM12-203ENST00000590563 ZNF157P51786 506 aaPredicted RBP18.05■□□□□ 0.48
LSM12-203ENST00000590563 PKN2Q16513 984 aaKnown RBP18.05■□□□□ 0.48
LSM12-203ENST00000590563 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
LSM12-203ENST00000590563 CRAMP1Q96RY5 1269 aa18.05■□□□□ 0.48
LSM12-203ENST00000590563 VPS33BQ9H267 617 aa18.05■□□□□ 0.48
LSM12-203ENST00000590563 C3orf67Q6ZVT6 689 aa18.04■□□□□ 0.48
LSM12-203ENST00000590563 RTFDC1Q9BY42 306 aaPredicted RBP18.04■□□□□ 0.48
LSM12-203ENST00000590563 GNAT3A8MTJ3 354 aa18.03■□□□□ 0.48
LSM12-203ENST00000590563 ADM5C9JUS6 153 aa18.03■□□□□ 0.48
LSM12-203ENST00000590563 RAD17O75943 681 aa18.03■□□□□ 0.48
LSM12-203ENST00000590563 GTF2E1P29083 439 aaPredicted RBP18.03■□□□□ 0.48
LSM12-203ENST00000590563 CNOT7Q9UIV1 285 aaKnown RBP18.03■□□□□ 0.48
LSM12-203ENST00000590563 IBTKQ9P2D0 1353 aaPredicted RBP18.03■□□□□ 0.48
LSM12-203ENST00000590563 EGFRP00533 1210 aa18.02■□□□□ 0.48
LSM12-203ENST00000590563 C2orf69Q8N8R5 385 aa18.02■□□□□ 0.48
LSM12-203ENST00000590563 ZNF296Q8WUU4 475 aaPredicted RBP18.02■□□□□ 0.48
LSM12-203ENST00000590563 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.48
LSM12-203ENST00000590563 NYXQ9GZU5 481 aa18.02■□□□□ 0.48
LSM12-203ENST00000590563 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
LSM12-203ENST00000590563 BTBD11A6QL63 1104 aa18.01■□□□□ 0.47
LSM12-203ENST00000590563 YDJCA8MPS7 323 aa18.01■□□□□ 0.47
LSM12-203ENST00000590563 KRT26Q7Z3Y9 468 aa18.01■□□□□ 0.47
LSM12-203ENST00000590563 RASAL3Q86YV0 1011 aa18.01■□□□□ 0.47
LSM12-203ENST00000590563 MICALL2Q8IY33 904 aa18.01■□□□□ 0.47
LSM12-203ENST00000590563 RBM17Q96I25 401 aaKnown RBP18.01■□□□□ 0.47
LSM12-203ENST00000590563 ATP6V0A2Q9Y487 856 aa18.01■□□□□ 0.47
LSM12-203ENST00000590563 MKI67P46013 3256 aaKnown RBP18.01■□□□□ 0.47
LSM12-203ENST00000590563 DUOX1Q9NRD9 1551 aa18■□□□□ 0.47
LSM12-203ENST00000590563 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
LSM12-203ENST00000590563 SAMD7Q7Z3H4 446 aa18■□□□□ 0.47
LSM12-203ENST00000590563 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
LSM12-203ENST00000590563 FBXO46Q6PJ61 603 aaPredicted RBP17.99■□□□□ 0.47
LSM12-203ENST00000590563 SNRPA1P09661 255 aaKnown RBP17.98■□□□□ 0.47
LSM12-203ENST00000590563 TNIP1Q15025 636 aa17.98■□□□□ 0.47
LSM12-203ENST00000590563 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
LSM12-203ENST00000590563 HDAC9Q9UKV0 1011 aa17.98■□□□□ 0.47
LSM12-203ENST00000590563 ZBTB12Q9Y330 459 aaPredicted RBP17.98■□□□□ 0.47
LSM12-203ENST00000590563 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
LSM12-203ENST00000590563 ABCC4O15439 1325 aa17.97■□□□□ 0.47
LSM12-203ENST00000590563 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
LSM12-203ENST00000590563 NUP98P52948 1817 aa17.96■□□□□ 0.47
LSM12-203ENST00000590563 H7C1D1 291 aa17.96■□□□□ 0.47
LSM12-203ENST00000590563 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
LSM12-203ENST00000590563 NTSR2O95665 410 aa17.96■□□□□ 0.47
LSM12-203ENST00000590563 TBC1D8O95759 1140 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms