RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.28
GFAP-216ENST00000589701 LINS1Q8NG48 757 aa13.27□□□□□ -0.28
GFAP-216ENST00000589701 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.28
GFAP-216ENST00000589701 SOS2Q07890 1332 aaPredicted RBP13.27□□□□□ -0.28
GFAP-216ENST00000589701 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.29
GFAP-216ENST00000589701 ADCK5Q3MIX3 580 aa13.27□□□□□ -0.29
GFAP-216ENST00000589701 CNPY4Q8N129 248 aa13.27□□□□□ -0.29
GFAP-216ENST00000589701 GRPEL1Q9HAV7 217 aa13.27□□□□□ -0.29
GFAP-216ENST00000589701 HEG1Q9ULI3 1381 aa13.27□□□□□ -0.29
GFAP-216ENST00000589701 CABP4P57796 275 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 TOM1L2Q6ZVM7 507 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 IFNL2Q8IZJ0 200 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 TAF6LQ9Y6J9 622 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 SGSM2O43147 1006 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 RXRBP28702 533 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 PRDM11Q9NQV5 511 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 CNTROBQ8N137 903 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 SNX14Q9Y5W7 946 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 AFF2P51816 1311 aa13.26□□□□□ -0.29
GFAP-216ENST00000589701 C5P01031 1676 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 CYP2E1P05181 493 aaPredicted RBP13.25□□□□□ -0.29
GFAP-216ENST00000589701 MCCP23508 829 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
GFAP-216ENST00000589701 CCDC85AQ96PX6 553 aaPredicted RBP13.25□□□□□ -0.29
GFAP-216ENST00000589701 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 LARGE1O95461 756 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 A1BGP04217 495 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 GCKRQ14397 625 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
GFAP-216ENST00000589701 ECHDC1Q9NTX5 307 aa13.25□□□□□ -0.29
GFAP-216ENST00000589701 HSPA4P34932 840 aa13.24□□□□□ -0.29
GFAP-216ENST00000589701 G3BP1Q13283 466 aaKnown RBP eCLIP13.24□□□□□ -0.29
GFAP-216ENST00000589701 L1TD1Q5T7N2 865 aaKnown RBP13.24□□□□□ -0.29
GFAP-216ENST00000589701 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
GFAP-216ENST00000589701 GPT2Q8TD30 523 aa13.24□□□□□ -0.29
GFAP-216ENST00000589701 LMBRD1Q9NUN5 540 aa13.24□□□□□ -0.29
GFAP-216ENST00000589701 COL22A1Q8NFW1 1626 aaPredicted RBP13.24□□□□□ -0.29
GFAP-216ENST00000589701 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
GFAP-216ENST00000589701 DDX58O95786 925 aaKnown RBP13.24□□□□□ -0.29
GFAP-216ENST00000589701 CASTP20810 708 aaKnown RBP13.24□□□□□ -0.29
GFAP-216ENST00000589701 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
GFAP-216ENST00000589701 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 AK2P54819 239 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
GFAP-216ENST00000589701 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 SPATA31A3Q5VYP0 1347 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 A0A087WZG4 1122 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 NUCB2P80303 420 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 LRP10Q7Z4F1 713 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 C8orf37Q96NL8 207 aa13.23□□□□□ -0.29
GFAP-216ENST00000589701 TCHHQ07283 1943 aa13.22□□□□□ -0.29
GFAP-216ENST00000589701 RAD50Q92878 1312 aa13.22□□□□□ -0.29
GFAP-216ENST00000589701 A0A0D9SFI3 127 aa13.22□□□□□ -0.29
GFAP-216ENST00000589701 GLRX3O76003 335 aaKnown RBP13.22□□□□□ -0.29
GFAP-216ENST00000589701 SNRPA1P09661 255 aaKnown RBP13.22□□□□□ -0.29
GFAP-216ENST00000589701 MTX1Q13505 466 aa13.22□□□□□ -0.29
GFAP-216ENST00000589701 PRDM10Q9NQV6 1147 aa13.22□□□□□ -0.29
GFAP-216ENST00000589701 TFCP2Q12800 502 aa13.22□□□□□ -0.29
GFAP-216ENST00000589701 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
GFAP-216ENST00000589701 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
GFAP-216ENST00000589701 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
GFAP-216ENST00000589701 N4BP2Q86UW6 1770 aaPredicted RBP13.22□□□□□ -0.29
GFAP-216ENST00000589701 RUFY3Q7L099 469 aa13.21□□□□□ -0.29
GFAP-216ENST00000589701 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.29
GFAP-216ENST00000589701 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.29
GFAP-216ENST00000589701 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
GFAP-216ENST00000589701 KCNJ4P48050 445 aa13.21□□□□□ -0.3
GFAP-216ENST00000589701 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.3
GFAP-216ENST00000589701 NECAB1Q8N987 351 aa13.21□□□□□ -0.3
GFAP-216ENST00000589701 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.3
GFAP-216ENST00000589701 SIPA1L3O60292 1781 aaPredicted RBP13.21□□□□□ -0.3
GFAP-216ENST00000589701 HSP90AB4PQ58FF6 505 aa13.2□□□□□ -0.3
GFAP-216ENST00000589701 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
GFAP-216ENST00000589701 ZNF594Q96JF6 807 aaPredicted RBP13.2□□□□□ -0.3
GFAP-216ENST00000589701 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
GFAP-216ENST00000589701 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
GFAP-216ENST00000589701 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
GFAP-216ENST00000589701 TNS3Q68CZ2 1445 aa13.2□□□□□ -0.3
GFAP-216ENST00000589701 GADD45BO75293 160 aaPredicted RBP13.2□□□□□ -0.3
GFAP-216ENST00000589701 MRE11P49959 708 aa13.2□□□□□ -0.3
GFAP-216ENST00000589701 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
GFAP-216ENST00000589701 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
GFAP-216ENST00000589701 QTRT2Q9H974 415 aaKnown RBP13.2□□□□□ -0.3
GFAP-216ENST00000589701 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
GFAP-216ENST00000589701 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
GFAP-216ENST00000589701 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms