RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 PRPF40BQ6NWY9 871 aaKnown RBP21.72■■□□□ 1.07
H3F3B-208ENST00000589599 RPGRQ92834 1020 aaKnown RBP21.72■■□□□ 1.07
H3F3B-208ENST00000589599 NLRP3Q96P20 1036 aa21.72■■□□□ 1.07
H3F3B-208ENST00000589599 ABCC12Q96J65 1359 aa21.72■■□□□ 1.07
H3F3B-208ENST00000589599 TCERG1O14776 1098 aaKnown RBP21.71■■□□□ 1.07
H3F3B-208ENST00000589599 SLC4A2P04920 1241 aa21.71■■□□□ 1.07
H3F3B-208ENST00000589599 CRY2Q49AN0 593 aa21.71■■□□□ 1.07
H3F3B-208ENST00000589599 C9orf131Q5VYM1 1079 aa21.71■■□□□ 1.07
H3F3B-208ENST00000589599 ISCA1Q9BUE6 129 aa21.71■■□□□ 1.07
H3F3B-208ENST00000589599 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
H3F3B-208ENST00000589599 ATP5J2-PTCD1G3V325 749 aa21.7■■□□□ 1.06
H3F3B-208ENST00000589599 VAMP4O75379 141 aa21.7■■□□□ 1.06
H3F3B-208ENST00000589599 TRIM28Q13263 835 aaKnown RBP21.7■■□□□ 1.06
H3F3B-208ENST00000589599 ARFGEF1Q9Y6D6 1849 aa21.7■■□□□ 1.06
H3F3B-208ENST00000589599 SH3TC1Q8TE82 1336 aa21.7■■□□□ 1.06
H3F3B-208ENST00000589599 DLEC1Q9Y238 1755 aa21.69■■□□□ 1.06
H3F3B-208ENST00000589599 RBM17Q96I25 401 aaKnown RBP21.69■■□□□ 1.06
H3F3B-208ENST00000589599 ZNF521Q96K83 1311 aa21.69■■□□□ 1.06
H3F3B-208ENST00000589599 RIC1Q4ADV7 1423 aa21.69■■□□□ 1.06
H3F3B-208ENST00000589599 HOXA10P31260 410 aaPredicted RBP21.68■■□□□ 1.06
H3F3B-208ENST00000589599 MIER1Q8N108 512 aa21.68■■□□□ 1.06
H3F3B-208ENST00000589599 RNF181Q9P0P0 153 aa21.68■■□□□ 1.06
H3F3B-208ENST00000589599 ADCY9O60503 1353 aa21.67■■□□□ 1.06
H3F3B-208ENST00000589599 LMNB1P20700 586 aa21.67■■□□□ 1.06
H3F3B-208ENST00000589599 KSR2Q6VAB6 950 aa21.67■■□□□ 1.06
H3F3B-208ENST00000589599 MYD88Q99836 296 aa21.67■■□□□ 1.06
H3F3B-208ENST00000589599 E9PSI1 815 aa21.66■■□□□ 1.06
H3F3B-208ENST00000589599 HCLS1P14317 486 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-208ENST00000589599 RASSF7Q02833 373 aa21.66■■□□□ 1.06
H3F3B-208ENST00000589599 CRAMP1Q96RY5 1269 aa21.66■■□□□ 1.06
H3F3B-208ENST00000589599 METTL22Q9BUU2 404 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-208ENST00000589599 GPBP1L1Q9HC44 474 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-208ENST00000589599 MAP3K2Q9Y2U5 619 aa21.66■■□□□ 1.06
H3F3B-208ENST00000589599 COL11A2P13942 1736 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-208ENST00000589599 NFKBIEO00221 500 aa21.65■■□□□ 1.06
H3F3B-208ENST00000589599 CCDC93Q567U6 631 aa21.65■■□□□ 1.06
H3F3B-208ENST00000589599 ZNF526Q8TF50 670 aaPredicted RBP21.65■■□□□ 1.06
H3F3B-208ENST00000589599 C7orf43Q8WVR3 580 aa21.65■■□□□ 1.06
H3F3B-208ENST00000589599 PI4KAP2A4QPH2 592 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 HSP90B1P14625 803 aaKnown RBP21.64■■□□□ 1.05
H3F3B-208ENST00000589599 NEXNQ0ZGT2 675 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 C3orf67Q6ZVT6 689 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 RTKN2Q8IZC4 609 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 SYNE4Q8N205 404 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 PI4KAP1Q8N8J0 262 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 CCDC191Q8NCU4 936 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 ZNF428Q96B54 188 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 FAM89AQ96GI7 184 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 TAOK3Q9H2K8 898 aa21.64■■□□□ 1.05
H3F3B-208ENST00000589599 G2E3Q7L622 706 aa21.63■■□□□ 1.05
H3F3B-208ENST00000589599 TMX4Q9H1E5 349 aaPredicted RBP21.63■■□□□ 1.05
H3F3B-208ENST00000589599 CWC25Q9NXE8 425 aaPredicted RBP21.63■■□□□ 1.05
H3F3B-208ENST00000589599 FLIIQ13045 1269 aa21.62■■□□□ 1.05
H3F3B-208ENST00000589599 CC2D2BQ6DHV5 1058 aa21.62■■□□□ 1.05
H3F3B-208ENST00000589599 ZBTB38Q8NAP3 1195 aaPredicted RBP21.62■■□□□ 1.05
H3F3B-208ENST00000589599 LTBP3Q9NS15 1303 aa21.61■■□□□ 1.05
H3F3B-208ENST00000589599 FKBP5Q13451 457 aaPredicted RBP21.61■■□□□ 1.05
H3F3B-208ENST00000589599 DDX46Q7L014 1031 aaKnown RBP21.61■■□□□ 1.05
H3F3B-208ENST00000589599 ANKRD36CQ5JPF3 1778 aa21.61■■□□□ 1.05
H3F3B-208ENST00000589599 ZC3H4Q9UPT8 1303 aaKnown RBP21.6■■□□□ 1.05
H3F3B-208ENST00000589599 SLX4Q8IY92 1834 aa21.6■■□□□ 1.05
H3F3B-208ENST00000589599 IRS4O14654 1257 aaPredicted RBP21.6■■□□□ 1.05
H3F3B-208ENST00000589599 SLFN5Q08AF3 891 aa21.6■■□□□ 1.05
H3F3B-208ENST00000589599 GRIPAP1Q4V328 841 aa21.6■■□□□ 1.05
H3F3B-208ENST00000589599 RTL5Q5HYW3 569 aaPredicted RBP21.6■■□□□ 1.05
H3F3B-208ENST00000589599 TNRC6CQ9HCJ0 1690 aaKnown RBP21.6■■□□□ 1.05
H3F3B-208ENST00000589599 PPEF1O14829 653 aaPredicted RBP21.59■■□□□ 1.05
H3F3B-208ENST00000589599 BBOX1O75936 387 aa21.59■■□□□ 1.05
H3F3B-208ENST00000589599 KDM2BQ8NHM5 1336 aa21.58■■□□□ 1.05
H3F3B-208ENST00000589599 PCCAP05165 728 aaPredicted RBP21.58■■□□□ 1.05
H3F3B-208ENST00000589599 FKBP4Q02790 459 aaKnown RBP eCLIP21.58■■□□□ 1.05
H3F3B-208ENST00000589599 PRELPP51888 382 aa21.57■■□□□ 1.04
H3F3B-208ENST00000589599 SF3B3Q15393 1217 aaKnown RBP21.57■■□□□ 1.04
H3F3B-208ENST00000589599 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
H3F3B-208ENST00000589599 ABCC4O15439 1325 aa21.56■■□□□ 1.04
H3F3B-208ENST00000589599 ARFGEF2Q9Y6D5 1785 aa21.56■■□□□ 1.04
H3F3B-208ENST00000589599 IGKV5-2P06315 115 aa21.56■■□□□ 1.04
H3F3B-208ENST00000589599 DNAAF4Q8WXU2 420 aa21.56■■□□□ 1.04
H3F3B-208ENST00000589599 CDCA7LQ96GN5 454 aa21.56■■□□□ 1.04
H3F3B-208ENST00000589599 ATP6V0A2Q9Y487 856 aa21.56■■□□□ 1.04
H3F3B-208ENST00000589599 GRAPQ13588 217 aa21.55■■□□□ 1.04
H3F3B-208ENST00000589599 GRAPLQ8TC17 118 aaPredicted RBP21.55■■□□□ 1.04
H3F3B-208ENST00000589599 NEURL1BA8MQ27 555 aa21.54■■□□□ 1.04
H3F3B-208ENST00000589599 TMC4Q7Z404 712 aa21.54■■□□□ 1.04
H3F3B-208ENST00000589599 PSMD1Q99460 953 aa21.54■■□□□ 1.04
H3F3B-208ENST00000589599 PDE8AO60658 829 aa21.53■■□□□ 1.04
H3F3B-208ENST00000589599 CWF19L2Q2TBE0 894 aaKnown RBP21.53■■□□□ 1.04
H3F3B-208ENST00000589599 DPY19L2Q6NUT2 758 aa21.53■■□□□ 1.04
H3F3B-208ENST00000589599 SP8Q8IXZ3 490 aa21.53■■□□□ 1.04
H3F3B-208ENST00000589599 LINS1Q8NG48 757 aa21.53■■□□□ 1.04
H3F3B-208ENST00000589599 JARID2Q92833 1246 aaPredicted RBP21.53■■□□□ 1.04
H3F3B-208ENST00000589599 ZNF277Q9NRM2 450 aaPredicted RBP21.53■■□□□ 1.04
H3F3B-208ENST00000589599 CCDC152Q4G0S7 254 aa21.52■■□□□ 1.04
H3F3B-208ENST00000589599 TRMT2AQ8IZ69 625 aaKnown RBP21.52■■□□□ 1.04
H3F3B-208ENST00000589599 CDHR2Q9BYE9 1310 aa21.52■■□□□ 1.03
H3F3B-208ENST00000589599 GLTPD2A6NH11 291 aa21.51■■□□□ 1.03
H3F3B-208ENST00000589599 GCKRQ14397 625 aa21.51■■□□□ 1.03
H3F3B-208ENST00000589599 CACNA1SQ13698 1873 aa21.51■■□□□ 1.03
H3F3B-208ENST00000589599 SBF1O95248 1867 aa21.5■■□□□ 1.03
H3F3B-208ENST00000589599 FER1L6Q2WGJ9 1857 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms