RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 KIF23Q02241 960 aaPredicted RBP8.44□□□□□ -1.06
VPS25-204ENST00000589577 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
VPS25-204ENST00000589577 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
VPS25-204ENST00000589577 NPHP1O15259 732 aa8.43□□□□□ -1.06
VPS25-204ENST00000589577 RNMTO43148 476 aaKnown RBP8.43□□□□□ -1.06
VPS25-204ENST00000589577 TNNT2P45379 298 aaPredicted RBP8.43□□□□□ -1.06
VPS25-204ENST00000589577 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
VPS25-204ENST00000589577 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
VPS25-204ENST00000589577 STARD3NLO95772 234 aa8.42□□□□□ -1.06
VPS25-204ENST00000589577 IL6STP40189 918 aaPredicted RBP8.42□□□□□ -1.06
VPS25-204ENST00000589577 RGMBQ6NW40 437 aa8.42□□□□□ -1.06
VPS25-204ENST00000589577 NBPF5PQ86XG9 351 aaPredicted RBP8.42□□□□□ -1.06
VPS25-204ENST00000589577 TRPM4Q8TD43 1214 aa8.42□□□□□ -1.06
VPS25-204ENST00000589577 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
VPS25-204ENST00000589577 NPC1L1Q9UHC9 1359 aa8.42□□□□□ -1.06
VPS25-204ENST00000589577 KIAA0100Q14667 2235 aaKnown RBP8.42□□□□□ -1.06
VPS25-204ENST00000589577 ABCC12Q96J65 1359 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 HEG1Q9ULI3 1381 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 SHTN1A0MZ66 631 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 SLC24A1O60721 1099 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 A1BGP04217 495 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 SLC10A3P09131 477 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 GMPSP49915 693 aaPredicted RBP8.41□□□□□ -1.06
VPS25-204ENST00000589577 CRY2Q49AN0 593 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 SULT6B1Q6IMI4 303 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 CDC37L1Q7L3B6 337 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
VPS25-204ENST00000589577 ZNF496Q96IT1 587 aaPredicted RBP8.41□□□□□ -1.06
VPS25-204ENST00000589577 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
VPS25-204ENST00000589577 RIC1Q4ADV7 1423 aa8.4□□□□□ -1.06
VPS25-204ENST00000589577 POTEFA5A3E0 1075 aa8.4□□□□□ -1.06
VPS25-204ENST00000589577 CXCL9Q07325 125 aa8.4□□□□□ -1.06
VPS25-204ENST00000589577 PKN2Q16513 984 aaKnown RBP8.4□□□□□ -1.06
VPS25-204ENST00000589577 DZIP3Q86Y13 1208 aaKnown RBP8.4□□□□□ -1.06
VPS25-204ENST00000589577 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.06
VPS25-204ENST00000589577 ZNF296Q8WUU4 475 aaPredicted RBP8.4□□□□□ -1.06
VPS25-204ENST00000589577 CDHR2Q9BYE9 1310 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 NUP98P52948 1817 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 ALDH1B1P30837 517 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 PIP4K2AP48426 406 aaPredicted RBP8.39□□□□□ -1.07
VPS25-204ENST00000589577 ZNF157P51786 506 aaPredicted RBP8.39□□□□□ -1.07
VPS25-204ENST00000589577 AOC3Q16853 763 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 USP48Q86UV5 1035 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 NIM1KQ8IY84 436 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 GBA2Q9HCG7 927 aaPredicted RBP8.39□□□□□ -1.07
VPS25-204ENST00000589577 VCANP13611 3396 aa8.39□□□□□ -1.07
VPS25-204ENST00000589577 FBXO46Q6PJ61 603 aaPredicted RBP8.38□□□□□ -1.07
VPS25-204ENST00000589577 DUOX1Q9NRD9 1551 aa8.38□□□□□ -1.07
VPS25-204ENST00000589577 LAMB2P55268 1798 aa8.38□□□□□ -1.07
VPS25-204ENST00000589577 KDM3BQ7LBC6 1761 aa8.38□□□□□ -1.07
VPS25-204ENST00000589577 FAM177BA6PVY3 158 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 ADM5C9JUS6 153 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 PPIP5K2O43314 1243 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 EGFRP00533 1210 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 IL13P35225 146 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 ZNF790Q6PG37 636 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 CLEC4GQ6UXB4 293 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 TPTE2Q6XPS3 522 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 RASAL3Q86YV0 1011 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
VPS25-204ENST00000589577 TBC1D8O95759 1140 aa8.36□□□□□ -1.07
VPS25-204ENST00000589577 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
VPS25-204ENST00000589577 MTHFSDQ2M296 383 aaKnown RBP8.36□□□□□ -1.07
VPS25-204ENST00000589577 TTC5Q8N0Z6 440 aa8.36□□□□□ -1.07
VPS25-204ENST00000589577 HDAC9Q9UKV0 1011 aa8.36□□□□□ -1.07
VPS25-204ENST00000589577 ZNRF3Q9ULT6 936 aa8.36□□□□□ -1.07
VPS25-204ENST00000589577 NIP7Q9Y221 180 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS25-204ENST00000589577 LAMB1P07942 1786 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 KIF7Q2M1P5 1343 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 LRRC37AA6NMS7 1700 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 TAF1P21675 1872 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 PRAMEF22A3QJZ6 481 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 RAD17O75943 681 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 KRT26Q7Z3Y9 468 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 C2orf69Q8N8R5 385 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 TEX13AQ9BXU3 409 aaPredicted RBP8.35□□□□□ -1.07
VPS25-204ENST00000589577 CNOT7Q9UIV1 285 aaKnown RBP8.35□□□□□ -1.07
VPS25-204ENST00000589577 LAMB4A4D0S4 1761 aa8.35□□□□□ -1.07
VPS25-204ENST00000589577 SCN9AQ15858 1988 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 YDJCA8MPS7 323 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 GPR25O00155 361 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
VPS25-204ENST00000589577 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
VPS25-204ENST00000589577 KCNQ3O43525 872 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 HLFQ16534 295 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 GRIPAP1Q4V328 841 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 CDCA8Q53HL2 280 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 NOM1Q5C9Z4 860 aaKnown RBP8.34□□□□□ -1.07
VPS25-204ENST00000589577 C3orf67Q6ZVT6 689 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 SAMD7Q7Z3H4 446 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 NUTM1Q86Y26 1132 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 MICALL2Q8IY33 904 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 RTFDC1Q9BY42 306 aaPredicted RBP8.34□□□□□ -1.07
VPS25-204ENST00000589577 R3HDMLQ9H3Y0 253 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 ZNF652Q9Y2D9 606 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 USP16Q9Y5T5 823 aa8.34□□□□□ -1.07
VPS25-204ENST00000589577 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms