RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 ABCC12Q96J65 1359 aa22.6■■□□□ 1.21
H3F3B-207ENST00000589417 ARHGAP27Q6ZUM4 889 aa22.59■■□□□ 1.21
H3F3B-207ENST00000589417 E9PSI1 815 aa22.58■■□□□ 1.21
H3F3B-207ENST00000589417 DDX58O95786 925 aaKnown RBP22.58■■□□□ 1.21
H3F3B-207ENST00000589417 HOXA10P31260 410 aaPredicted RBP22.58■■□□□ 1.21
H3F3B-207ENST00000589417 RIC3Q7Z5B4 369 aa22.58■■□□□ 1.21
H3F3B-207ENST00000589417 ARFGEF1Q9Y6D6 1849 aa22.58■■□□□ 1.21
H3F3B-207ENST00000589417 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
H3F3B-207ENST00000589417 ADCY9O60503 1353 aa22.56■■□□□ 1.2
H3F3B-207ENST00000589417 ALDH1B1P30837 517 aa22.56■■□□□ 1.2
H3F3B-207ENST00000589417 SLFN5Q08AF3 891 aa22.56■■□□□ 1.2
H3F3B-207ENST00000589417 KSR2Q6VAB6 950 aa22.56■■□□□ 1.2
H3F3B-207ENST00000589417 TRMT2AQ8IZ69 625 aaKnown RBP22.56■■□□□ 1.2
H3F3B-207ENST00000589417 C7orf43Q8WVR3 580 aa22.56■■□□□ 1.2
H3F3B-207ENST00000589417 ZNF784Q8NCA9 323 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-207ENST00000589417 METTL22Q9BUU2 404 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-207ENST00000589417 TRMT112Q9UI30 125 aaKnown RBP22.55■■□□□ 1.2
H3F3B-207ENST00000589417 SH3TC1Q8TE82 1336 aa22.55■■□□□ 1.2
H3F3B-207ENST00000589417 PRPF40BQ6NWY9 871 aaKnown RBP22.54■■□□□ 1.2
H3F3B-207ENST00000589417 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
H3F3B-207ENST00000589417 COL11A2P13942 1736 aaPredicted RBP22.54■■□□□ 1.2
H3F3B-207ENST00000589417 ATP5J2-PTCD1G3V325 749 aa22.53■■□□□ 1.2
H3F3B-207ENST00000589417 SOGA3Q5TF21 947 aa22.53■■□□□ 1.2
H3F3B-207ENST00000589417 G2E3Q7L622 706 aa22.53■■□□□ 1.2
H3F3B-207ENST00000589417 CCDC191Q8NCU4 936 aa22.53■■□□□ 1.2
H3F3B-207ENST00000589417 PI4KAP2A4QPH2 592 aa22.52■■□□□ 1.2
H3F3B-207ENST00000589417 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
H3F3B-207ENST00000589417 PI4KAP1Q8N8J0 262 aa22.52■■□□□ 1.2
H3F3B-207ENST00000589417 CRAMP1Q96RY5 1269 aa22.52■■□□□ 1.2
H3F3B-207ENST00000589417 ANKRD36CQ5JPF3 1778 aa22.51■■□□□ 1.19
H3F3B-207ENST00000589417 C21orf2O43822 256 aa22.51■■□□□ 1.19
H3F3B-207ENST00000589417 FLIIQ13045 1269 aa22.51■■□□□ 1.19
H3F3B-207ENST00000589417 MAP3K2Q9Y2U5 619 aa22.51■■□□□ 1.19
H3F3B-207ENST00000589417 LTBP3Q9NS15 1303 aa22.51■■□□□ 1.19
H3F3B-207ENST00000589417 NFKBIEO00221 500 aa22.5■■□□□ 1.19
H3F3B-207ENST00000589417 C3orf67Q6ZVT6 689 aa22.5■■□□□ 1.19
H3F3B-207ENST00000589417 SYNE4Q8N205 404 aa22.5■■□□□ 1.19
H3F3B-207ENST00000589417 ZBTB38Q8NAP3 1195 aaPredicted RBP22.5■■□□□ 1.19
H3F3B-207ENST00000589417 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
H3F3B-207ENST00000589417 MYD88Q99836 296 aa22.5■■□□□ 1.19
H3F3B-207ENST00000589417 RPGRQ92834 1020 aaKnown RBP22.49■■□□□ 1.19
H3F3B-207ENST00000589417 RBM17Q96I25 401 aaKnown RBP22.49■■□□□ 1.19
H3F3B-207ENST00000589417 TNRC6CQ9HCJ0 1690 aaKnown RBP22.49■■□□□ 1.19
H3F3B-207ENST00000589417 IGKV5-2P06315 115 aa22.48■■□□□ 1.19
H3F3B-207ENST00000589417 HCLS1P14317 486 aaPredicted RBP22.48■■□□□ 1.19
H3F3B-207ENST00000589417 C9orf131Q5VYM1 1079 aa22.48■■□□□ 1.19
H3F3B-207ENST00000589417 FAM89AQ96GI7 184 aa22.48■■□□□ 1.19
H3F3B-207ENST00000589417 CDCA7LQ96GN5 454 aa22.48■■□□□ 1.19
H3F3B-207ENST00000589417 PCCAP05165 728 aaPredicted RBP22.47■■□□□ 1.19
H3F3B-207ENST00000589417 HSP90B1P14625 803 aaKnown RBP22.47■■□□□ 1.19
H3F3B-207ENST00000589417 LMNB1P20700 586 aa22.47■■□□□ 1.19
H3F3B-207ENST00000589417 SF3B3Q15393 1217 aaKnown RBP22.47■■□□□ 1.19
H3F3B-207ENST00000589417 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
H3F3B-207ENST00000589417 CWC25Q9NXE8 425 aaPredicted RBP22.47■■□□□ 1.19
H3F3B-207ENST00000589417 ARFGEF2Q9Y6D5 1785 aa22.47■■□□□ 1.19
H3F3B-207ENST00000589417 SLX4Q8IY92 1834 aa22.46■■□□□ 1.19
H3F3B-207ENST00000589417 PRELPP51888 382 aa22.46■■□□□ 1.19
H3F3B-207ENST00000589417 NEXNQ0ZGT2 675 aa22.46■■□□□ 1.19
H3F3B-207ENST00000589417 GRIPAP1Q4V328 841 aa22.46■■□□□ 1.19
H3F3B-207ENST00000589417 CCDC93Q567U6 631 aa22.46■■□□□ 1.19
H3F3B-207ENST00000589417 ZC3H4Q9UPT8 1303 aaKnown RBP22.46■■□□□ 1.19
H3F3B-207ENST00000589417 CT47B1P0C2W7 299 aaPredicted RBP22.45■■□□□ 1.18
H3F3B-207ENST00000589417 FKBP5Q13451 457 aaPredicted RBP22.45■■□□□ 1.18
H3F3B-207ENST00000589417 RTKN2Q8IZC4 609 aa22.45■■□□□ 1.18
H3F3B-207ENST00000589417 IRS4O14654 1257 aaPredicted RBP22.44■■□□□ 1.18
H3F3B-207ENST00000589417 BBOX1O75936 387 aa22.44■■□□□ 1.18
H3F3B-207ENST00000589417 RASSF7Q02833 373 aa22.44■■□□□ 1.18
H3F3B-207ENST00000589417 SNED1Q8TER0 1413 aa22.44■■□□□ 1.18
H3F3B-207ENST00000589417 DNAAF4Q8WXU2 420 aa22.44■■□□□ 1.18
H3F3B-207ENST00000589417 CACNA1FO60840 1977 aa22.43■■□□□ 1.18
H3F3B-207ENST00000589417 NEURL1BA8MQ27 555 aa22.43■■□□□ 1.18
H3F3B-207ENST00000589417 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
H3F3B-207ENST00000589417 RNF181Q9P0P0 153 aa22.43■■□□□ 1.18
H3F3B-207ENST00000589417 ZNF219Q9P2Y4 722 aaPredicted RBP22.43■■□□□ 1.18
H3F3B-207ENST00000589417 CDHR2Q9BYE9 1310 aa22.42■■□□□ 1.18
H3F3B-207ENST00000589417 LINS1Q8NG48 757 aa22.42■■□□□ 1.18
H3F3B-207ENST00000589417 ABCC4O15439 1325 aa22.41■■□□□ 1.18
H3F3B-207ENST00000589417 FKBP4Q02790 459 aaKnown RBP eCLIP22.41■■□□□ 1.18
H3F3B-207ENST00000589417 ALDH1L2Q3SY69 923 aa22.41■■□□□ 1.18
H3F3B-207ENST00000589417 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
H3F3B-207ENST00000589417 H7C1W4 665 aa22.4■■□□□ 1.18
H3F3B-207ENST00000589417 GRAPQ13588 217 aa22.4■■□□□ 1.18
H3F3B-207ENST00000589417 MRPL50Q8N5N7 158 aaKnown RBP22.4■■□□□ 1.18
H3F3B-207ENST00000589417 GRAPLQ8TC17 118 aaPredicted RBP22.4■■□□□ 1.18
H3F3B-207ENST00000589417 PSMD1Q99460 953 aa22.4■■□□□ 1.18
H3F3B-207ENST00000589417 ATP6V0A2Q9Y487 856 aa22.4■■□□□ 1.18
H3F3B-207ENST00000589417 FER1L6Q2WGJ9 1857 aa22.39■■□□□ 1.18
H3F3B-207ENST00000589417 PPEF1O14829 653 aaPredicted RBP22.39■■□□□ 1.17
H3F3B-207ENST00000589417 PDE8AO60658 829 aa22.39■■□□□ 1.17
H3F3B-207ENST00000589417 GCKRQ14397 625 aa22.39■■□□□ 1.17
H3F3B-207ENST00000589417 CWF19L2Q2TBE0 894 aaKnown RBP22.39■■□□□ 1.17
H3F3B-207ENST00000589417 BEND3Q5T5X7 828 aa22.39■■□□□ 1.17
H3F3B-207ENST00000589417 TMC4Q7Z404 712 aa22.39■■□□□ 1.17
H3F3B-207ENST00000589417 BRPF1P55201 1214 aaPredicted RBP22.38■■□□□ 1.17
H3F3B-207ENST00000589417 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
H3F3B-207ENST00000589417 OLFM4Q6UX06 510 aa22.38■■□□□ 1.17
H3F3B-207ENST00000589417 SP8Q8IXZ3 490 aa22.38■■□□□ 1.17
H3F3B-207ENST00000589417 SSH1Q8WYL5 1049 aa22.38■■□□□ 1.17
H3F3B-207ENST00000589417 SBF1O95248 1867 aa22.37■■□□□ 1.17
H3F3B-207ENST00000589417 GPBP1L1Q9HC44 474 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms