RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 KNDC1Q76NI1 1749 aa11.71□□□□□ -0.54
DNMT1-219ENST00000589349 SPATA31A3Q5VYP0 1347 aa11.7□□□□□ -0.54
DNMT1-219ENST00000589349 AXIN1O15169 862 aa11.7□□□□□ -0.54
DNMT1-219ENST00000589349 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
DNMT1-219ENST00000589349 CDK19Q9BWU1 502 aa11.7□□□□□ -0.54
DNMT1-219ENST00000589349 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
DNMT1-219ENST00000589349 DHX9Q08211 1270 aaKnown RBP11.69□□□□□ -0.54
DNMT1-219ENST00000589349 CCDC116Q8IYX3 515 aa11.69□□□□□ -0.54
DNMT1-219ENST00000589349 NUDT16Q96DE0 195 aaKnown RBP11.69□□□□□ -0.54
DNMT1-219ENST00000589349 NR3C2P08235 984 aa11.68□□□□□ -0.54
DNMT1-219ENST00000589349 POM121Q96HA1 1249 aa11.68□□□□□ -0.54
DNMT1-219ENST00000589349 DLC1Q96QB1 1528 aa11.68□□□□□ -0.54
DNMT1-219ENST00000589349 FMN2Q9NZ56 1722 aa11.68□□□□□ -0.54
DNMT1-219ENST00000589349 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
DNMT1-219ENST00000589349 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
DNMT1-219ENST00000589349 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
DNMT1-219ENST00000589349 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
DNMT1-219ENST00000589349 PXDNQ92626 1479 aa11.67□□□□□ -0.54
DNMT1-219ENST00000589349 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
DNMT1-219ENST00000589349 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-219ENST00000589349 LCE2BO14633 110 aa11.66□□□□□ -0.54
DNMT1-219ENST00000589349 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
DNMT1-219ENST00000589349 CAPN5O15484 640 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-219ENST00000589349 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
DNMT1-219ENST00000589349 CCDC125Q86Z20 511 aa11.66□□□□□ -0.54
DNMT1-219ENST00000589349 ANKARQ7Z5J8 1434 aa11.66□□□□□ -0.54
DNMT1-219ENST00000589349 ARHGEF10O15013 1369 aa11.66□□□□□ -0.54
DNMT1-219ENST00000589349 ROCK2O75116 1388 aaKnown RBP11.66□□□□□ -0.54
DNMT1-219ENST00000589349 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
DNMT1-219ENST00000589349 KIF1AQ12756 1690 aa11.65□□□□□ -0.54
DNMT1-219ENST00000589349 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
DNMT1-219ENST00000589349 ZBTB7CA1YPR0 619 aa11.65□□□□□ -0.54
DNMT1-219ENST00000589349 ESPNB1AK53 854 aa11.65□□□□□ -0.54
DNMT1-219ENST00000589349 VAC14Q08AM6 782 aa11.65□□□□□ -0.54
DNMT1-219ENST00000589349 INTS6LQ5JSJ4 861 aaKnown RBP11.65□□□□□ -0.54
DNMT1-219ENST00000589349 PGPEP1Q9NXJ5 209 aa11.65□□□□□ -0.54
DNMT1-219ENST00000589349 TNS3Q68CZ2 1445 aa11.65□□□□□ -0.54
DNMT1-219ENST00000589349 RGPD8O14715 1765 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-219ENST00000589349 TIMP2P16035 220 aa11.64□□□□□ -0.55
DNMT1-219ENST00000589349 SOX11P35716 441 aa11.64□□□□□ -0.55
DNMT1-219ENST00000589349 RNF20Q5VTR2 975 aa11.64□□□□□ -0.55
DNMT1-219ENST00000589349 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
DNMT1-219ENST00000589349 FNBP4Q8N3X1 1017 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-219ENST00000589349 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
DNMT1-219ENST00000589349 GTF3C3Q9Y5Q9 886 aa11.64□□□□□ -0.55
DNMT1-219ENST00000589349 SBNO1A3KN83 1393 aa11.64□□□□□ -0.55
DNMT1-219ENST00000589349 ZIC2O95409 532 aaPredicted RBP11.63□□□□□ -0.55
DNMT1-219ENST00000589349 PPP1R26Q5T8A7 1209 aaPredicted RBP11.63□□□□□ -0.55
DNMT1-219ENST00000589349 KLF16Q9BXK1 252 aaPredicted RBP11.63□□□□□ -0.55
DNMT1-219ENST00000589349 RAB15P59190 212 aa11.62□□□□□ -0.55
DNMT1-219ENST00000589349 ABTB2Q8N961 1025 aa11.62□□□□□ -0.55
DNMT1-219ENST00000589349 ITPKCQ96DU7 683 aa11.62□□□□□ -0.55
DNMT1-219ENST00000589349 CARD11Q9BXL7 1154 aa11.62□□□□□ -0.55
DNMT1-219ENST00000589349 ACEP12821 1306 aa11.61□□□□□ -0.55
DNMT1-219ENST00000589349 TULP4Q9NRJ4 1543 aa11.61□□□□□ -0.55
DNMT1-219ENST00000589349 ZC3H6P61129 1189 aaKnown RBP11.61□□□□□ -0.55
DNMT1-219ENST00000589349 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
DNMT1-219ENST00000589349 PRDM11Q9NQV5 511 aa11.61□□□□□ -0.55
DNMT1-219ENST00000589349 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 FAM83GA6ND36 823 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
DNMT1-219ENST00000589349 EVA1CP58658 441 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 SEMA3FQ13275 785 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 BTG4Q9NY30 223 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 RGS12O14924 1447 aa11.6□□□□□ -0.55
DNMT1-219ENST00000589349 A6NJR5 290 aa11.59□□□□□ -0.55
DNMT1-219ENST00000589349 CHRNA2Q15822 529 aa11.59□□□□□ -0.55
DNMT1-219ENST00000589349 ZFAND3Q9H8U3 227 aa11.59□□□□□ -0.55
DNMT1-219ENST00000589349 COL22A1Q8NFW1 1626 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-219ENST00000589349 ADGRB2O60241 1585 aa11.58□□□□□ -0.55
DNMT1-219ENST00000589349 ARHGEF28Q8N1W1 1705 aaKnown RBP11.58□□□□□ -0.56
DNMT1-219ENST00000589349 ATAD2Q6PL18 1390 aa11.58□□□□□ -0.56
DNMT1-219ENST00000589349 TMC1Q8TDI8 760 aa11.58□□□□□ -0.56
DNMT1-219ENST00000589349 ATP13A2Q9NQ11 1180 aa11.58□□□□□ -0.56
DNMT1-219ENST00000589349 CEP126Q9P2H0 1117 aa11.58□□□□□ -0.56
DNMT1-219ENST00000589349 PPIP5K1Q6PFW1 1433 aa11.58□□□□□ -0.56
DNMT1-219ENST00000589349 USP32Q8NFA0 1604 aa11.57□□□□□ -0.56
DNMT1-219ENST00000589349 ERVH48-1M5A8F1 160 aa11.57□□□□□ -0.56
DNMT1-219ENST00000589349 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
DNMT1-219ENST00000589349 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
DNMT1-219ENST00000589349 ATRNO75882 1429 aa11.57□□□□□ -0.56
DNMT1-219ENST00000589349 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
DNMT1-219ENST00000589349 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
DNMT1-219ENST00000589349 VPS72Q15906 364 aa11.56□□□□□ -0.56
DNMT1-219ENST00000589349 NLRP13Q86W25 1043 aa11.56□□□□□ -0.56
DNMT1-219ENST00000589349 KIAA1210Q9ULL0 1709 aa11.56□□□□□ -0.56
DNMT1-219ENST00000589349 ATP7BP35670 1465 aa11.56□□□□□ -0.56
DNMT1-219ENST00000589349 SLFNL1Q499Z3 407 aa11.55□□□□□ -0.56
DNMT1-219ENST00000589349 DACH1Q9UI36 760 aa11.55□□□□□ -0.56
DNMT1-219ENST00000589349 UPP2O95045 317 aa11.54□□□□□ -0.56
DNMT1-219ENST00000589349 MRPL14Q6P1L8 145 aaKnown RBP11.54□□□□□ -0.56
DNMT1-219ENST00000589349 MEIOBQ8N635 442 aa11.54□□□□□ -0.56
DNMT1-219ENST00000589349 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-219ENST00000589349 SENP2Q9HC62 589 aa11.54□□□□□ -0.56
DNMT1-219ENST00000589349 TMPRSS4Q9NRS4 437 aa11.54□□□□□ -0.56
DNMT1-219ENST00000589349 KIAA0232Q92628 1395 aa11.54□□□□□ -0.56
DNMT1-219ENST00000589349 RALGAPBQ86X10 1494 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms