RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
DNMT1-218ENST00000589294 BCORQ6W2J9 1755 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 UBN2Q6ZU65 1347 aa15.38■□□□□ 0.05
DNMT1-218ENST00000589294 CASZ1Q86V15 1759 aa15.37■□□□□ 0.05
DNMT1-218ENST00000589294 DDR1Q08345 913 aa15.37■□□□□ 0.05
DNMT1-218ENST00000589294 NBPF5PQ86XG9 351 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-218ENST00000589294 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-218ENST00000589294 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
DNMT1-218ENST00000589294 TNNQ9UQP3 1299 aa15.37■□□□□ 0.05
DNMT1-218ENST00000589294 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
DNMT1-218ENST00000589294 H7C1W4 665 aa15.36■□□□□ 0.05
DNMT1-218ENST00000589294 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-218ENST00000589294 RLBP1P12271 317 aa15.36■□□□□ 0.05
DNMT1-218ENST00000589294 HSP90B1P14625 803 aaKnown RBP15.36■□□□□ 0.05
DNMT1-218ENST00000589294 SLC10A5Q5PT55 438 aa15.36■□□□□ 0.05
DNMT1-218ENST00000589294 TMEM57Q8N5G2 664 aa15.36■□□□□ 0.05
DNMT1-218ENST00000589294 PANK1Q8TE04 598 aa15.36■□□□□ 0.05
DNMT1-218ENST00000589294 C9orf78Q9NZ63 289 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-218ENST00000589294 NTSR2O95665 410 aa15.35■□□□□ 0.05
DNMT1-218ENST00000589294 GTF2E1P29083 439 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-218ENST00000589294 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
DNMT1-218ENST00000589294 USP44Q9H0E7 712 aa15.35■□□□□ 0.05
DNMT1-218ENST00000589294 CHMP4BQ9H444 224 aaKnown RBP15.35■□□□□ 0.05
DNMT1-218ENST00000589294 HDAC5Q9UQL6 1122 aa15.35■□□□□ 0.05
DNMT1-218ENST00000589294 SH3TC1Q8TE82 1336 aa15.35■□□□□ 0.05
DNMT1-218ENST00000589294 GRM8O00222 908 aa15.34■□□□□ 0.05
DNMT1-218ENST00000589294 PTGER2P43116 358 aa15.34■□□□□ 0.05
DNMT1-218ENST00000589294 C20orf194Q5TEA3 1177 aa15.34■□□□□ 0.05
DNMT1-218ENST00000589294 CNBD1Q8NA66 436 aa15.34■□□□□ 0.05
DNMT1-218ENST00000589294 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
DNMT1-218ENST00000589294 UTYO14607 1347 aa15.34■□□□□ 0.05
DNMT1-218ENST00000589294 FAM177BA6PVY3 158 aa15.33■□□□□ 0.04
DNMT1-218ENST00000589294 ZBTB7BO15156 539 aaPredicted RBP15.33■□□□□ 0.04
DNMT1-218ENST00000589294 NPHP1O15259 732 aa15.33■□□□□ 0.04
DNMT1-218ENST00000589294 GNAI3P08754 354 aa15.33■□□□□ 0.04
DNMT1-218ENST00000589294 MVPQ14764 893 aaKnown RBP15.33■□□□□ 0.04
DNMT1-218ENST00000589294 PRR5LQ6MZQ0 368 aa15.33■□□□□ 0.04
DNMT1-218ENST00000589294 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.04
DNMT1-218ENST00000589294 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
DNMT1-218ENST00000589294 ST5P78524 1137 aa15.32■□□□□ 0.04
DNMT1-218ENST00000589294 ERFEQ4G0M1 354 aa15.32■□□□□ 0.04
DNMT1-218ENST00000589294 BRIP1Q9BX63 1249 aa15.32■□□□□ 0.04
DNMT1-218ENST00000589294 COG6Q9Y2V7 657 aa15.32■□□□□ 0.04
DNMT1-218ENST00000589294 CDHR2Q9BYE9 1310 aa15.32■□□□□ 0.04
DNMT1-218ENST00000589294 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
DNMT1-218ENST00000589294 ANKRD36CQ5JPF3 1778 aa15.31■□□□□ 0.04
DNMT1-218ENST00000589294 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
DNMT1-218ENST00000589294 NBPF7P0C2Y1 421 aaPredicted RBP15.31■□□□□ 0.04
DNMT1-218ENST00000589294 CASP7P55210 303 aa15.31■□□□□ 0.04
DNMT1-218ENST00000589294 UBE3BQ7Z3V4 1068 aa15.31■□□□□ 0.04
DNMT1-218ENST00000589294 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
DNMT1-218ENST00000589294 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
DNMT1-218ENST00000589294 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
DNMT1-218ENST00000589294 PLA2G12BQ9BX93 195 aa15.3■□□□□ 0.04
DNMT1-218ENST00000589294 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
DNMT1-218ENST00000589294 KLRG2A4D1S0 409 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-218ENST00000589294 PDE8AO60658 829 aa15.29■□□□□ 0.04
DNMT1-218ENST00000589294 UBTFL1P0CB47 393 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-218ENST00000589294 PDE6BP35913 854 aa15.29■□□□□ 0.04
DNMT1-218ENST00000589294 AAMPQ13685 434 aa15.29■□□□□ 0.04
DNMT1-218ENST00000589294 RTL5Q5HYW3 569 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-218ENST00000589294 JARID2Q92833 1246 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-218ENST00000589294 MEIS3Q99687 375 aa15.29■□□□□ 0.04
DNMT1-218ENST00000589294 GNAI2P04899 355 aa15.28■□□□□ 0.04
DNMT1-218ENST00000589294 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-218ENST00000589294 ZBTB40Q9NUA8 1239 aa15.28■□□□□ 0.04
DNMT1-218ENST00000589294 CD2APQ9Y5K6 639 aa15.28■□□□□ 0.04
DNMT1-218ENST00000589294 RIC1Q4ADV7 1423 aa15.27■□□□□ 0.04
DNMT1-218ENST00000589294 NRXN2Q9P2S2 1712 aa15.27■□□□□ 0.04
DNMT1-218ENST00000589294 SF3B3Q15393 1217 aaKnown RBP15.27■□□□□ 0.04
DNMT1-218ENST00000589294 AFDNP55196 1824 aaKnown RBP15.27■□□□□ 0.03
DNMT1-218ENST00000589294 CSF1RP07333 972 aa15.26■□□□□ 0.03
DNMT1-218ENST00000589294 TGFB2P61812 414 aa15.26■□□□□ 0.03
DNMT1-218ENST00000589294 FOXO4P98177 505 aa15.26■□□□□ 0.03
DNMT1-218ENST00000589294 CCDC24Q8N4L8 307 aa15.26■□□□□ 0.03
DNMT1-218ENST00000589294 KAZALD1Q96I82 304 aa15.26■□□□□ 0.03
DNMT1-218ENST00000589294 CRBNQ96SW2 442 aa15.26■□□□□ 0.03
DNMT1-218ENST00000589294 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
DNMT1-218ENST00000589294 H0YIN7 160 aa15.25■□□□□ 0.03
DNMT1-218ENST00000589294 CRY2Q49AN0 593 aa15.25■□□□□ 0.03
DNMT1-218ENST00000589294 TTLL11Q8NHH1 800 aa15.25■□□□□ 0.03
DNMT1-218ENST00000589294 SUCLG2Q96I99 432 aa15.25■□□□□ 0.03
DNMT1-218ENST00000589294 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
DNMT1-218ENST00000589294 HOXA10P31260 410 aaPredicted RBP15.24■□□□□ 0.03
DNMT1-218ENST00000589294 CTSWP56202 376 aa15.24■□□□□ 0.03
DNMT1-218ENST00000589294 RABL6Q3YEC7 729 aaPredicted RBP15.24■□□□□ 0.03
DNMT1-218ENST00000589294 CCDC152Q4G0S7 254 aa15.24■□□□□ 0.03
DNMT1-218ENST00000589294 PPP1R1BQ9UD71 204 aaPredicted RBP15.24■□□□□ 0.03
DNMT1-218ENST00000589294 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
DNMT1-218ENST00000589294 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
DNMT1-218ENST00000589294 SRGNP10124 158 aa15.23■□□□□ 0.03
DNMT1-218ENST00000589294 EPHA10Q5JZY3 1008 aa15.23■□□□□ 0.03
DNMT1-218ENST00000589294 LMBR1LQ6UX01 489 aa15.23■□□□□ 0.03
DNMT1-218ENST00000589294 C2CD5Q86YS7 1000 aa15.23■□□□□ 0.03
DNMT1-218ENST00000589294 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
DNMT1-218ENST00000589294 NPR1P16066 1061 aa15.22■□□□□ 0.03
DNMT1-218ENST00000589294 MTX1Q13505 466 aa15.22■□□□□ 0.03
DNMT1-218ENST00000589294 STYK1Q6J9G0 422 aa15.22■□□□□ 0.03
DNMT1-218ENST00000589294 C3orf67Q6ZVT6 689 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms