RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 HOXA10P31260 410 aaPredicted RBP17.87■□□□□ 0.45
ERCC1-208ENST00000589165 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
ERCC1-208ENST00000589165 ISCA1Q9BUE6 129 aa17.87■□□□□ 0.45
ERCC1-208ENST00000589165 PHAXQ9H814 394 aaKnown RBP17.87■□□□□ 0.45
ERCC1-208ENST00000589165 ZNF521Q96K83 1311 aa17.87■□□□□ 0.45
ERCC1-208ENST00000589165 NFKBIEO00221 500 aa17.86■□□□□ 0.45
ERCC1-208ENST00000589165 TRIM28Q13263 835 aaKnown RBP17.86■□□□□ 0.45
ERCC1-208ENST00000589165 MYH16Q9H6N6 1097 aa17.86■□□□□ 0.45
ERCC1-208ENST00000589165 LMNB1P20700 586 aa17.85■□□□□ 0.45
ERCC1-208ENST00000589165 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
ERCC1-208ENST00000589165 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-208ENST00000589165 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
ERCC1-208ENST00000589165 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
ERCC1-208ENST00000589165 LTBP3Q9NS15 1303 aa17.84■□□□□ 0.45
ERCC1-208ENST00000589165 DDX58O95786 925 aaKnown RBP17.84■□□□□ 0.45
ERCC1-208ENST00000589165 RASSF7Q02833 373 aa17.84■□□□□ 0.45
ERCC1-208ENST00000589165 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
ERCC1-208ENST00000589165 NLRP3Q96P20 1036 aa17.84■□□□□ 0.45
ERCC1-208ENST00000589165 GPBP1L1Q9HC44 474 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-208ENST00000589165 RNF181Q9P0P0 153 aa17.84■□□□□ 0.45
ERCC1-208ENST00000589165 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.45
ERCC1-208ENST00000589165 C3orf67Q6ZVT6 689 aa17.83■□□□□ 0.45
ERCC1-208ENST00000589165 RPGRQ92834 1020 aaKnown RBP17.83■□□□□ 0.45
ERCC1-208ENST00000589165 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.45
ERCC1-208ENST00000589165 TNRC6CQ9HCJ0 1690 aaKnown RBP17.82■□□□□ 0.44
ERCC1-208ENST00000589165 VAMP4O75379 141 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 PRELPP51888 382 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 EXOSC9Q06265 439 aaKnown RBP17.82■□□□□ 0.44
ERCC1-208ENST00000589165 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 ATP5J2-PTCD1G3V325 749 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
ERCC1-208ENST00000589165 TAOK3Q9H2K8 898 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
ERCC1-208ENST00000589165 KSR2Q6VAB6 950 aa17.81■□□□□ 0.44
ERCC1-208ENST00000589165 SYNE4Q8N205 404 aa17.81■□□□□ 0.44
ERCC1-208ENST00000589165 ANKRD36CQ5JPF3 1778 aa17.8■□□□□ 0.44
ERCC1-208ENST00000589165 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-208ENST00000589165 CC2D2BQ6DHV5 1058 aa17.8■□□□□ 0.44
ERCC1-208ENST00000589165 RTKN2Q8IZC4 609 aa17.8■□□□□ 0.44
ERCC1-208ENST00000589165 ZNF526Q8TF50 670 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-208ENST00000589165 METTL22Q9BUU2 404 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-208ENST00000589165 ARFGEF2Q9Y6D5 1785 aa17.8■□□□□ 0.44
ERCC1-208ENST00000589165 CACNA1SQ13698 1873 aa17.79■□□□□ 0.44
ERCC1-208ENST00000589165 TCERG1O14776 1098 aaKnown RBP17.79■□□□□ 0.44
ERCC1-208ENST00000589165 DIEXFQ68CQ4 756 aaKnown RBP17.79■□□□□ 0.44
ERCC1-208ENST00000589165 CCDC191Q8NCU4 936 aa17.79■□□□□ 0.44
ERCC1-208ENST00000589165 FAM89AQ96GI7 184 aa17.79■□□□□ 0.44
ERCC1-208ENST00000589165 MYD88Q99836 296 aa17.79■□□□□ 0.44
ERCC1-208ENST00000589165 PI4KAP2A4QPH2 592 aa17.78■□□□□ 0.44
ERCC1-208ENST00000589165 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
ERCC1-208ENST00000589165 G2E3Q7L622 706 aa17.78■□□□□ 0.44
ERCC1-208ENST00000589165 PI4KAP1Q8N8J0 262 aa17.78■□□□□ 0.44
ERCC1-208ENST00000589165 MAP3K2Q9Y2U5 619 aa17.78■□□□□ 0.44
ERCC1-208ENST00000589165 FKBP4Q02790 459 aaKnown RBP eCLIP17.77■□□□□ 0.44
ERCC1-208ENST00000589165 OLFM4Q6UX06 510 aa17.77■□□□□ 0.44
ERCC1-208ENST00000589165 ZBTB38Q8NAP3 1195 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-208ENST00000589165 SNED1Q8TER0 1413 aa17.77■□□□□ 0.43
ERCC1-208ENST00000589165 E9PSI1 815 aa17.76■□□□□ 0.43
ERCC1-208ENST00000589165 FLIIQ13045 1269 aa17.76■□□□□ 0.43
ERCC1-208ENST00000589165 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
ERCC1-208ENST00000589165 CWC25Q9NXE8 425 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-208ENST00000589165 ABCC4O15439 1325 aa17.76■□□□□ 0.43
ERCC1-208ENST00000589165 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
ERCC1-208ENST00000589165 SBF1O95248 1867 aa17.76■□□□□ 0.43
ERCC1-208ENST00000589165 FER1L6Q2WGJ9 1857 aa17.76■□□□□ 0.43
ERCC1-208ENST00000589165 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-208ENST00000589165 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-208ENST00000589165 BBOX1O75936 387 aa17.75■□□□□ 0.43
ERCC1-208ENST00000589165 HSP90B1P14625 803 aaKnown RBP17.75■□□□□ 0.43
ERCC1-208ENST00000589165 C1QTNF8P60827 252 aa17.75■□□□□ 0.43
ERCC1-208ENST00000589165 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
ERCC1-208ENST00000589165 PSMD1Q99460 953 aa17.75■□□□□ 0.43
ERCC1-208ENST00000589165 KIF3CO14782 793 aa17.75■□□□□ 0.43
ERCC1-208ENST00000589165 PCCAP05165 728 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-208ENST00000589165 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
ERCC1-208ENST00000589165 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
ERCC1-208ENST00000589165 GLTPD2A6NH11 291 aa17.74■□□□□ 0.43
ERCC1-208ENST00000589165 IGKV5-2P06315 115 aa17.74■□□□□ 0.43
ERCC1-208ENST00000589165 ATP6V0A2Q9Y487 856 aa17.74■□□□□ 0.43
ERCC1-208ENST00000589165 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
ERCC1-208ENST00000589165 FKBP5Q13451 457 aaPredicted RBP17.73■□□□□ 0.43
ERCC1-208ENST00000589165 GRAPQ13588 217 aa17.73■□□□□ 0.43
ERCC1-208ENST00000589165 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
ERCC1-208ENST00000589165 MIER1Q8N108 512 aa17.73■□□□□ 0.43
ERCC1-208ENST00000589165 GRAPLQ8TC17 118 aaPredicted RBP17.73■□□□□ 0.43
ERCC1-208ENST00000589165 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
ERCC1-208ENST00000589165 TMC4Q7Z404 712 aa17.72■□□□□ 0.43
ERCC1-208ENST00000589165 TMX4Q9H1E5 349 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-208ENST00000589165 NEURL1BA8MQ27 555 aa17.71■□□□□ 0.43
ERCC1-208ENST00000589165 SP8Q8IXZ3 490 aa17.71■□□□□ 0.43
ERCC1-208ENST00000589165 DNAAF4Q8WXU2 420 aa17.71■□□□□ 0.43
ERCC1-208ENST00000589165 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
ERCC1-208ENST00000589165 CDHR2Q9BYE9 1310 aa17.71■□□□□ 0.43
ERCC1-208ENST00000589165 IARSP41252 1262 aaKnown RBP17.7■□□□□ 0.42
ERCC1-208ENST00000589165 DPY19L2Q6NUT2 758 aa17.7■□□□□ 0.42
ERCC1-208ENST00000589165 TRMT2AQ8IZ69 625 aaKnown RBP17.7■□□□□ 0.42
ERCC1-208ENST00000589165 PDE8AO60658 829 aa17.69■□□□□ 0.42
ERCC1-208ENST00000589165 CWF19L2Q2TBE0 894 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms