RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 RIC1Q4ADV7 1423 aa24.83■■□□□ 1.57
CIRBP-221ENST00000589161 SLC10A5Q5PT55 438 aa24.82■■□□□ 1.56
CIRBP-221ENST00000589161 C7orf43Q8WVR3 580 aa24.82■■□□□ 1.56
CIRBP-221ENST00000589161 RPGRQ92834 1020 aaKnown RBP24.82■■□□□ 1.56
CIRBP-221ENST00000589161 SALL2Q9Y467 1007 aaPredicted RBP24.82■■□□□ 1.56
CIRBP-221ENST00000589161 ZC3H4Q9UPT8 1303 aaKnown RBP24.82■■□□□ 1.56
CIRBP-221ENST00000589161 NLRP3Q96P20 1036 aa24.81■■□□□ 1.56
CIRBP-221ENST00000589161 LTBP3Q9NS15 1303 aa24.81■■□□□ 1.56
CIRBP-221ENST00000589161 HOXA10P31260 410 aaPredicted RBP24.8■■□□□ 1.56
CIRBP-221ENST00000589161 TSPYL6Q8N831 410 aa24.8■■□□□ 1.56
CIRBP-221ENST00000589161 TAOK3Q9H2K8 898 aa24.8■■□□□ 1.56
CIRBP-221ENST00000589161 PRELPP51888 382 aa24.79■■□□□ 1.56
CIRBP-221ENST00000589161 GOLGA2Q08379 1002 aa24.79■■□□□ 1.56
CIRBP-221ENST00000589161 CCDC93Q567U6 631 aa24.79■■□□□ 1.56
CIRBP-221ENST00000589161 RBM17Q96I25 401 aaKnown RBP24.79■■□□□ 1.56
CIRBP-221ENST00000589161 TRMT112Q9UI30 125 aaKnown RBP24.79■■□□□ 1.56
CIRBP-221ENST00000589161 KDM2BQ8NHM5 1336 aa24.79■■□□□ 1.56
CIRBP-221ENST00000589161 SLX4Q8IY92 1834 aa24.78■■□□□ 1.56
CIRBP-221ENST00000589161 RIC3Q7Z5B4 369 aa24.78■■□□□ 1.56
CIRBP-221ENST00000589161 PHAXQ9H814 394 aaKnown RBP24.78■■□□□ 1.56
CIRBP-221ENST00000589161 RTKN2Q8IZC4 609 aa24.77■■□□□ 1.56
CIRBP-221ENST00000589161 CRAMP1Q96RY5 1269 aa24.77■■□□□ 1.56
CIRBP-221ENST00000589161 ISCA1Q9BUE6 129 aa24.77■■□□□ 1.56
CIRBP-221ENST00000589161 SH3TC1Q8TE82 1336 aa24.77■■□□□ 1.56
CIRBP-221ENST00000589161 SBF1O95248 1867 aa24.77■■□□□ 1.56
CIRBP-221ENST00000589161 KIF3CO14782 793 aa24.76■■□□□ 1.55
CIRBP-221ENST00000589161 TWISTNBQ3B726 338 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-221ENST00000589161 STK31Q9BXU1 1019 aa24.76■■□□□ 1.55
CIRBP-221ENST00000589161 DDX58O95786 925 aaKnown RBP24.75■■□□□ 1.55
CIRBP-221ENST00000589161 TRIM28Q13263 835 aaKnown RBP24.75■■□□□ 1.55
CIRBP-221ENST00000589161 ATP5J2-PTCD1G3V325 749 aa24.74■■□□□ 1.55
CIRBP-221ENST00000589161 CC2D2BQ6DHV5 1058 aa24.74■■□□□ 1.55
CIRBP-221ENST00000589161 C3orf67Q6ZVT6 689 aa24.74■■□□□ 1.55
CIRBP-221ENST00000589161 NMRK2Q9NPI5 230 aa24.74■■□□□ 1.55
CIRBP-221ENST00000589161 TNRC6CQ9HCJ0 1690 aaKnown RBP24.74■■□□□ 1.55
CIRBP-221ENST00000589161 ARFGEF2Q9Y6D5 1785 aa24.74■■□□□ 1.55
CIRBP-221ENST00000589161 FANCIQ9NVI1 1328 aa24.73■■□□□ 1.55
CIRBP-221ENST00000589161 HCLS1P14317 486 aaPredicted RBP24.73■■□□□ 1.55
CIRBP-221ENST00000589161 FKBP4Q02790 459 aaKnown RBP eCLIP24.73■■□□□ 1.55
CIRBP-221ENST00000589161 GLTPD2A6NH11 291 aa24.72■■□□□ 1.55
CIRBP-221ENST00000589161 GRIPAP1Q4V328 841 aa24.72■■□□□ 1.55
CIRBP-221ENST00000589161 SYNE4Q8N205 404 aa24.72■■□□□ 1.55
CIRBP-221ENST00000589161 FER1L6Q2WGJ9 1857 aa24.72■■□□□ 1.55
CIRBP-221ENST00000589161 DPY19L2Q6NUT2 758 aa24.71■■□□□ 1.55
CIRBP-221ENST00000589161 OLFM4Q6UX06 510 aa24.71■■□□□ 1.55
CIRBP-221ENST00000589161 MYH16Q9H6N6 1097 aa24.71■■□□□ 1.55
CIRBP-221ENST00000589161 ANKRD36CQ5JPF3 1778 aa24.71■■□□□ 1.55
CIRBP-221ENST00000589161 TMX4Q9H1E5 349 aaPredicted RBP24.7■■□□□ 1.54
CIRBP-221ENST00000589161 CACNA1SQ13698 1873 aa24.69■■□□□ 1.54
CIRBP-221ENST00000589161 PPEF1O14829 653 aaPredicted RBP24.69■■□□□ 1.54
CIRBP-221ENST00000589161 TOMM70O94826 608 aa24.69■■□□□ 1.54
CIRBP-221ENST00000589161 FAM89AQ96GI7 184 aa24.69■■□□□ 1.54
CIRBP-221ENST00000589161 MYD88Q99836 296 aa24.69■■□□□ 1.54
CIRBP-221ENST00000589161 RRAGCQ9HB90 399 aa24.69■■□□□ 1.54
CIRBP-221ENST00000589161 TCERG1O14776 1098 aaKnown RBP24.68■■□□□ 1.54
CIRBP-221ENST00000589161 BBOX1O75936 387 aa24.68■■□□□ 1.54
CIRBP-221ENST00000589161 SLC4A2P04920 1241 aa24.68■■□□□ 1.54
CIRBP-221ENST00000589161 KSR2Q6VAB6 950 aa24.68■■□□□ 1.54
CIRBP-221ENST00000589161 C16orf71Q8IYS4 520 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-221ENST00000589161 ZNF428Q96B54 188 aa24.68■■□□□ 1.54
CIRBP-221ENST00000589161 PSMD1Q99460 953 aa24.68■■□□□ 1.54
CIRBP-221ENST00000589161 METTL22Q9BUU2 404 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-221ENST00000589161 VAMP4O75379 141 aa24.67■■□□□ 1.54
CIRBP-221ENST00000589161 HSP90B1P14625 803 aaKnown RBP24.67■■□□□ 1.54
CIRBP-221ENST00000589161 EXOSC9Q06265 439 aaKnown RBP24.67■■□□□ 1.54
CIRBP-221ENST00000589161 DDX46Q7L014 1031 aaKnown RBP24.67■■□□□ 1.54
CIRBP-221ENST00000589161 CCDC191Q8NCU4 936 aa24.67■■□□□ 1.54
CIRBP-221ENST00000589161 ZNF277Q9NRM2 450 aaPredicted RBP24.67■■□□□ 1.54
CIRBP-221ENST00000589161 CCER2I3L3R5 266 aa24.66■■□□□ 1.54
CIRBP-221ENST00000589161 ZBTB38Q8NAP3 1195 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-221ENST00000589161 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-221ENST00000589161 MAP3K2Q9Y2U5 619 aa24.66■■□□□ 1.54
CIRBP-221ENST00000589161 ABCC4O15439 1325 aa24.65■■□□□ 1.54
CIRBP-221ENST00000589161 PI4KAP2A4QPH2 592 aa24.65■■□□□ 1.54
CIRBP-221ENST00000589161 PI4KAP1Q8N8J0 262 aa24.65■■□□□ 1.54
CIRBP-221ENST00000589161 CWC25Q9NXE8 425 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-221ENST00000589161 ATP6V0A2Q9Y487 856 aa24.65■■□□□ 1.54
CIRBP-221ENST00000589161 IRS4O14654 1257 aaPredicted RBP24.64■■□□□ 1.54
CIRBP-221ENST00000589161 VEGFAP15692 232 aaPredicted RBP24.64■■□□□ 1.54
CIRBP-221ENST00000589161 IARSP41252 1262 aaKnown RBP24.64■■□□□ 1.54
CIRBP-221ENST00000589161 SF3B3Q15393 1217 aaKnown RBP24.64■■□□□ 1.54
CIRBP-221ENST00000589161 RTL5Q5HYW3 569 aaPredicted RBP24.64■■□□□ 1.54
CIRBP-221ENST00000589161 CCDC88AQ3V6T2 1871 aa24.64■■□□□ 1.53
CIRBP-221ENST00000589161 NEXNQ0ZGT2 675 aa24.63■■□□□ 1.53
CIRBP-221ENST00000589161 GRAPQ13588 217 aa24.63■■□□□ 1.53
CIRBP-221ENST00000589161 GRAPLQ8TC17 118 aaPredicted RBP24.63■■□□□ 1.53
CIRBP-221ENST00000589161 ZNF521Q96K83 1311 aa24.62■■□□□ 1.53
CIRBP-221ENST00000589161 PCCAP05165 728 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-221ENST00000589161 G2E3Q7L622 706 aa24.62■■□□□ 1.53
CIRBP-221ENST00000589161 SP8Q8IXZ3 490 aa24.62■■□□□ 1.53
CIRBP-221ENST00000589161 RBM46Q8TBY0 533 aaKnown RBP24.62■■□□□ 1.53
CIRBP-221ENST00000589161 SNED1Q8TER0 1413 aa24.61■■□□□ 1.53
CIRBP-221ENST00000589161 FLIIQ13045 1269 aa24.61■■□□□ 1.53
CIRBP-221ENST00000589161 TMC4Q7Z404 712 aa24.61■■□□□ 1.53
CIRBP-221ENST00000589161 TIAM2Q8IVF5 1701 aa24.61■■□□□ 1.53
CIRBP-221ENST00000589161 JDP2Q8WYK2 163 aa24.6■■□□□ 1.53
CIRBP-221ENST00000589161 DICER1Q9UPY3 1922 aaKnown RBP24.6■■□□□ 1.53
CIRBP-221ENST00000589161 DDNO94850 711 aaPredicted RBP24.58■■□□□ 1.53
CIRBP-221ENST00000589161 IGKV5-2P06315 115 aa24.58■■□□□ 1.53
CIRBP-221ENST00000589161 HSPA6P17066 643 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms