RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ITPK1Q13572 414 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 INTS5Q6P9B9 1019 aaKnown RBP14.93□□□□□ -0.02
CCBE1-203ENST00000589116 NOP58Q9Y2X3 529 aaKnown RBP14.93□□□□□ -0.02
CCBE1-203ENST00000589116 MYH14Q7Z406 1995 aaKnown RBP14.92□□□□□ -0.02
CCBE1-203ENST00000589116 NUP98P52948 1817 aa14.92□□□□□ -0.02
CCBE1-203ENST00000589116 H7C1W4 665 aa14.92□□□□□ -0.02
CCBE1-203ENST00000589116 EIF5P55010 431 aaKnown RBP14.92□□□□□ -0.02
CCBE1-203ENST00000589116 CASP7P55210 303 aa14.92□□□□□ -0.02
CCBE1-203ENST00000589116 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
CCBE1-203ENST00000589116 UBE3BQ7Z3V4 1068 aa14.92□□□□□ -0.02
CCBE1-203ENST00000589116 PLEKHM2Q8IWE5 1019 aa14.92□□□□□ -0.02
CCBE1-203ENST00000589116 SURF6O75683 361 aaKnown RBP14.91□□□□□ -0.02
CCBE1-203ENST00000589116 ZBTB7AO95365 584 aa14.91□□□□□ -0.02
CCBE1-203ENST00000589116 CNTNAP4Q9C0A0 1308 aa14.91□□□□□ -0.02
CCBE1-203ENST00000589116 DZIP3Q86Y13 1208 aaKnown RBP14.9□□□□□ -0.02
CCBE1-203ENST00000589116 ERC1Q8IUD2 1116 aa14.9□□□□□ -0.02
CCBE1-203ENST00000589116 KIF1BPQ96EK5 621 aa14.9□□□□□ -0.02
CCBE1-203ENST00000589116 BCORQ6W2J9 1755 aa14.9□□□□□ -0.02
CCBE1-203ENST00000589116 APBB1O00213 710 aa14.9□□□□□ -0.02
CCBE1-203ENST00000589116 FHDC1Q9C0D6 1143 aaPredicted RBP14.9□□□□□ -0.02
CCBE1-203ENST00000589116 OSBPL3Q9H4L5 887 aa14.9□□□□□ -0.02
CCBE1-203ENST00000589116 SMARCA5O60264 1052 aaPredicted RBP14.89□□□□□ -0.03
CCBE1-203ENST00000589116 RHPN1Q8TCX5 695 aa14.89□□□□□ -0.03
CCBE1-203ENST00000589116 SYT17Q9BSW7 474 aa14.89□□□□□ -0.03
CCBE1-203ENST00000589116 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
CCBE1-203ENST00000589116 TAF1LQ8IZX4 1826 aa14.88□□□□□ -0.03
CCBE1-203ENST00000589116 SALL3Q9BXA9 1300 aa14.88□□□□□ -0.03
CCBE1-203ENST00000589116 PCCAP05165 728 aaPredicted RBP14.88□□□□□ -0.03
CCBE1-203ENST00000589116 EPHA10Q5JZY3 1008 aa14.88□□□□□ -0.03
CCBE1-203ENST00000589116 BCL11BQ9C0K0 894 aaPredicted RBP14.88□□□□□ -0.03
CCBE1-203ENST00000589116 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
CCBE1-203ENST00000589116 RGL2O15211 777 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 RC3H1Q5TC82 1133 aaKnown RBP14.87□□□□□ -0.03
CCBE1-203ENST00000589116 LINC00116Q8NCU8 138 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 ARXQ96QS3 562 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
CCBE1-203ENST00000589116 AOX1Q06278 1338 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 CDHR2Q9BYE9 1310 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 PTGER2P43116 358 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 OS9Q13438 667 aaPredicted RBP14.87□□□□□ -0.03
CCBE1-203ENST00000589116 HLFQ16534 295 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 PTF1AQ7RTS3 328 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 C16orf71Q8IYS4 520 aaPredicted RBP14.87□□□□□ -0.03
CCBE1-203ENST00000589116 ZBTB38Q8NAP3 1195 aaPredicted RBP14.87□□□□□ -0.03
CCBE1-203ENST00000589116 COPRSQ9NQ92 184 aa14.87□□□□□ -0.03
CCBE1-203ENST00000589116 PDE1AP54750 535 aa14.86□□□□□ -0.03
CCBE1-203ENST00000589116 FOXO4P98177 505 aa14.86□□□□□ -0.03
CCBE1-203ENST00000589116 NLRP10Q86W26 655 aa14.86□□□□□ -0.03
CCBE1-203ENST00000589116 PLA2G12BQ9BX93 195 aa14.86□□□□□ -0.03
CCBE1-203ENST00000589116 PDGFDQ9GZP0 370 aaPredicted RBP14.86□□□□□ -0.03
CCBE1-203ENST00000589116 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
CCBE1-203ENST00000589116 TBC1D2BQ9UPU7 963 aa14.86□□□□□ -0.03
CCBE1-203ENST00000589116 SCN7AQ01118 1682 aa14.86□□□□□ -0.03
CCBE1-203ENST00000589116 TUBGCP6Q96RT7 1819 aa14.85□□□□□ -0.03
CCBE1-203ENST00000589116 MX1P20591 662 aa14.85□□□□□ -0.03
CCBE1-203ENST00000589116 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
CCBE1-203ENST00000589116 G3BP1Q13283 466 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCBE1-203ENST00000589116 ZNF34Q8IZ26 560 aa14.85□□□□□ -0.03
CCBE1-203ENST00000589116 OTUD7AQ8TE49 926 aaPredicted RBP14.85□□□□□ -0.03
CCBE1-203ENST00000589116 CCNL1Q9UK58 526 aaPredicted RBP14.85□□□□□ -0.03
CCBE1-203ENST00000589116 MYH3P11055 1940 aa14.85□□□□□ -0.03
CCBE1-203ENST00000589116 CAMTA2O94983 1202 aa14.84□□□□□ -0.03
CCBE1-203ENST00000589116 GSPT1P15170 499 aaKnown RBP14.84□□□□□ -0.03
CCBE1-203ENST00000589116 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
CCBE1-203ENST00000589116 JARID2Q92833 1246 aaPredicted RBP14.84□□□□□ -0.03
CCBE1-203ENST00000589116 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
CCBE1-203ENST00000589116 ZNF652Q9Y2D9 606 aa14.84□□□□□ -0.03
CCBE1-203ENST00000589116 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
CCBE1-203ENST00000589116 PARP10Q53GL7 1025 aa14.84□□□□□ -0.03
CCBE1-203ENST00000589116 LMBR1LQ6UX01 489 aa14.84□□□□□ -0.03
CCBE1-203ENST00000589116 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
CCBE1-203ENST00000589116 UPF2Q9HAU5 1272 aaKnown RBP14.84□□□□□ -0.03
CCBE1-203ENST00000589116 C4BP0C0L5 1744 aa14.83□□□□□ -0.04
CCBE1-203ENST00000589116 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.04
CCBE1-203ENST00000589116 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.04
CCBE1-203ENST00000589116 GPTP24298 496 aa14.83□□□□□ -0.04
CCBE1-203ENST00000589116 PTPN12Q05209 780 aaKnown RBP14.83□□□□□ -0.04
CCBE1-203ENST00000589116 CLEC4GQ6UXB4 293 aa14.83□□□□□ -0.04
CCBE1-203ENST00000589116 IL1RAPL2Q9NP60 686 aa14.83□□□□□ -0.04
CCBE1-203ENST00000589116 UTRNP46939 3433 aa14.83□□□□□ -0.04
CCBE1-203ENST00000589116 USP42Q9H9J4 1324 aaKnown RBP14.83□□□□□ -0.04
CCBE1-203ENST00000589116 PLSCR1O15162 318 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 CDC45O75419 566 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 RPS6KA4O75676 772 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 HMGB2P26583 209 aaKnown RBP14.82□□□□□ -0.04
CCBE1-203ENST00000589116 GPR162Q16538 588 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 AK7Q96M32 723 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 CEP350Q5VT06 3117 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 UBN2Q6ZU65 1347 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 LAMB2P55268 1798 aa14.82□□□□□ -0.04
CCBE1-203ENST00000589116 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
CCBE1-203ENST00000589116 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
CCBE1-203ENST00000589116 TTC41PQ6P2S7 1318 aa14.81□□□□□ -0.04
CCBE1-203ENST00000589116 SASH1O94885 1247 aa14.81□□□□□ -0.04
CCBE1-203ENST00000589116 FAM89AQ96GI7 184 aa14.81□□□□□ -0.04
CCBE1-203ENST00000589116 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
CCBE1-203ENST00000589116 TRMT112Q9UI30 125 aaKnown RBP14.81□□□□□ -0.04
CCBE1-203ENST00000589116 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
CCBE1-203ENST00000589116 CSF1RP07333 972 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms