RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 C21orf2O43822 256 aa12.44□□□□□ -0.42
APOC1-204ENST00000589078 PDIA6Q15084 440 aa12.44□□□□□ -0.42
APOC1-204ENST00000589078 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
APOC1-204ENST00000589078 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
APOC1-204ENST00000589078 AIDAQ96BJ3 306 aa12.44□□□□□ -0.42
APOC1-204ENST00000589078 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
APOC1-204ENST00000589078 SCN4AP35499 1836 aa12.44□□□□□ -0.42
APOC1-204ENST00000589078 ZNF521Q96K83 1311 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 ANXA1P04083 346 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
APOC1-204ENST00000589078 ST5P78524 1137 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 AIMP1Q12904 312 aaKnown RBP12.43□□□□□ -0.42
APOC1-204ENST00000589078 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 COPS6Q7L5N1 327 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
APOC1-204ENST00000589078 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
APOC1-204ENST00000589078 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
APOC1-204ENST00000589078 PASKQ96RG2 1323 aa12.42□□□□□ -0.42
APOC1-204ENST00000589078 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
APOC1-204ENST00000589078 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
APOC1-204ENST00000589078 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
APOC1-204ENST00000589078 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
APOC1-204ENST00000589078 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
APOC1-204ENST00000589078 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
APOC1-204ENST00000589078 VEGFBP49765 207 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 HLFQ16534 295 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 GIGYF2Q6Y7W6 1299 aaKnown RBP12.41□□□□□ -0.42
APOC1-204ENST00000589078 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 NYXQ9GZU5 481 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
APOC1-204ENST00000589078 LTBP3Q9NS15 1303 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 PDE6BP35913 854 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 LBX1P52954 281 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 EXOSC9Q06265 439 aaKnown RBP12.4□□□□□ -0.42
APOC1-204ENST00000589078 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 PARP10Q53GL7 1025 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 CCDC24Q8N4L8 307 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
APOC1-204ENST00000589078 TNRC18O15417 2968 aaPredicted RBP12.39□□□□□ -0.43
APOC1-204ENST00000589078 BCORQ6W2J9 1755 aa12.39□□□□□ -0.43
APOC1-204ENST00000589078 IQCA1LA6NCM1 817 aa12.39□□□□□ -0.43
APOC1-204ENST00000589078 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
APOC1-204ENST00000589078 PPP1R42Q7Z4L9 355 aa12.39□□□□□ -0.43
APOC1-204ENST00000589078 BRIP1Q9BX63 1249 aa12.39□□□□□ -0.43
APOC1-204ENST00000589078 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
APOC1-204ENST00000589078 THSD7BQ9C0I4 1608 aa12.38□□□□□ -0.43
APOC1-204ENST00000589078 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
APOC1-204ENST00000589078 GPTP24298 496 aa12.38□□□□□ -0.43
APOC1-204ENST00000589078 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
APOC1-204ENST00000589078 RIC3Q7Z5B4 369 aa12.38□□□□□ -0.43
APOC1-204ENST00000589078 ABHD8Q96I13 439 aa12.38□□□□□ -0.43
APOC1-204ENST00000589078 TAF1DQ9H5J8 278 aaPredicted RBP12.38□□□□□ -0.43
APOC1-204ENST00000589078 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
APOC1-204ENST00000589078 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
APOC1-204ENST00000589078 VAMP4O75379 141 aa12.37□□□□□ -0.43
APOC1-204ENST00000589078 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
APOC1-204ENST00000589078 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
APOC1-204ENST00000589078 SLFN5Q08AF3 891 aa12.37□□□□□ -0.43
APOC1-204ENST00000589078 TCIRG1Q13488 830 aa12.37□□□□□ -0.43
APOC1-204ENST00000589078 PRPF40BQ6NWY9 871 aaKnown RBP12.37□□□□□ -0.43
APOC1-204ENST00000589078 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
APOC1-204ENST00000589078 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
APOC1-204ENST00000589078 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
APOC1-204ENST00000589078 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
APOC1-204ENST00000589078 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
APOC1-204ENST00000589078 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
APOC1-204ENST00000589078 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
APOC1-204ENST00000589078 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
APOC1-204ENST00000589078 ZNF541Q9H0D2 1346 aa12.36□□□□□ -0.43
APOC1-204ENST00000589078 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
APOC1-204ENST00000589078 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
APOC1-204ENST00000589078 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
APOC1-204ENST00000589078 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
APOC1-204ENST00000589078 STYK1Q6J9G0 422 aa12.35□□□□□ -0.43
APOC1-204ENST00000589078 CNKSR1Q969H4 720 aa12.35□□□□□ -0.43
APOC1-204ENST00000589078 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
APOC1-204ENST00000589078 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
APOC1-204ENST00000589078 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 SRGNP10124 158 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 HSP90B1P14625 803 aaKnown RBP12.34□□□□□ -0.43
APOC1-204ENST00000589078 FLIIQ13045 1269 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
APOC1-204ENST00000589078 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 KSR2Q6VAB6 950 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 NLRP10Q86W26 655 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
APOC1-204ENST00000589078 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
APOC1-204ENST00000589078 NTSR2O95665 410 aa12.33□□□□□ -0.44
APOC1-204ENST00000589078 TRIM28Q13263 835 aaKnown RBP12.33□□□□□ -0.44
APOC1-204ENST00000589078 NUTM1Q86Y26 1132 aa12.33□□□□□ -0.44
APOC1-204ENST00000589078 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms