RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 LSM14AQ8ND56 463 aaKnown RBP2.4□□□□□ -2.02
ZNF260-203ENST00000588993 POGKQ9P215 609 aa2.4□□□□□ -2.02
ZNF260-203ENST00000588993 RTCBQ9Y3I0 505 aaKnown RBP2.4□□□□□ -2.02
ZNF260-203ENST00000588993 NUP155O75694 1391 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 SUPT5HO00267 1087 aaKnown RBP2.4□□□□□ -2.03
ZNF260-203ENST00000588993 NTRK1P04629 796 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 CHRNA2Q15822 529 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 ERFEQ4G0M1 354 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 PAXIP1Q6ZW49 1069 aaPredicted RBP2.4□□□□□ -2.03
ZNF260-203ENST00000588993 ANKLE1Q8NAG6 615 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 ADARB2Q9NS39 739 aaKnown RBP2.4□□□□□ -2.03
ZNF260-203ENST00000588993 RAB3GAP2Q9H2M9 1393 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 A0A087WZG4 1122 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 H0YIN7 160 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 RPS6KA4O75676 772 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 TM4SF4P48230 202 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 EIF6P56537 245 aaKnown RBP2.4□□□□□ -2.03
ZNF260-203ENST00000588993 CDC37L1Q7L3B6 337 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 ABTB2Q8N961 1025 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 ZCCHC17Q9NP64 241 aaKnown RBP2.4□□□□□ -2.03
ZNF260-203ENST00000588993 PCDH11XQ9BZA7 1347 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 PCDH11YQ9BZA8 1340 aa2.4□□□□□ -2.03
ZNF260-203ENST00000588993 WDHD1O75717 1129 aaPredicted RBP2.39□□□□□ -2.03
ZNF260-203ENST00000588993 ZC3H6P61129 1189 aaKnown RBP2.39□□□□□ -2.03
ZNF260-203ENST00000588993 CCDC93Q567U6 631 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 AKNAD1Q5T1N1 836 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 OTUD7BQ6GQQ9 843 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.39□□□□□ -2.03
ZNF260-203ENST00000588993 H0YGN5 161 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 SLC24A1O60721 1099 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 FKBP4Q02790 459 aaKnown RBP eCLIP2.39□□□□□ -2.03
ZNF260-203ENST00000588993 TMEM31Q5JXX7 168 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 CIAPIN1Q6FI81 312 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 CYP4F22Q6NT55 531 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 NBPF10Q6P3W6 841 aaKnown RBP2.39□□□□□ -2.03
ZNF260-203ENST00000588993 DEFB123Q8N688 67 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 USP35Q9P2H5 1018 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 UBR2Q8IWV8 1755 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 SUPT20HQ8NEM7 779 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.39□□□□□ -2.03
ZNF260-203ENST00000588993 A0A0G2JLW4 131 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 GPR25O00155 361 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 SRPK2P78362 688 aaKnown RBP2.39□□□□□ -2.03
ZNF260-203ENST00000588993 PSMD1Q99460 953 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 PTPN22Q9Y2R2 807 aa2.39□□□□□ -2.03
ZNF260-203ENST00000588993 FZD9O00144 591 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 ACAP1Q15027 740 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 NKX1-1Q15270 411 aaPredicted RBP2.38□□□□□ -2.03
ZNF260-203ENST00000588993 ZNF697Q5TEC3 545 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 RBM27Q9P2N5 1060 aaKnown RBP2.38□□□□□ -2.03
ZNF260-203ENST00000588993 PLEKHH1Q9ULM0 1364 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 KMT2EQ8IZD2 1858 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 SDHBP21912 280 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 MRE11P49959 708 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 MSL1Q68DK7 614 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 ZCRB1Q8TBF4 217 aaKnown RBP2.38□□□□□ -2.03
ZNF260-203ENST00000588993 NUDT16Q96DE0 195 aaKnown RBP2.38□□□□□ -2.03
ZNF260-203ENST00000588993 ANKRD36CQ5JPF3 1778 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 CAPN8A6NHC0 703 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 HSP90AB1P08238 724 aaKnown RBP2.38□□□□□ -2.03
ZNF260-203ENST00000588993 RFC4P35249 363 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 KIF23Q02241 960 aaPredicted RBP2.38□□□□□ -2.03
ZNF260-203ENST00000588993 HELBQ8NG08 1087 aaPredicted RBP2.38□□□□□ -2.03
ZNF260-203ENST00000588993 CASP8AP2Q9UKL3 1982 aa2.38□□□□□ -2.03
ZNF260-203ENST00000588993 SALL1Q9NSC2 1324 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 SCN11AQ9UI33 1791 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 KDRP35968 1356 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 TMEM8BA6NDV4 472 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 MANSC4A6NHS7 340 aaPredicted RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 FAM155AB1AL88 458 aaPredicted RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 NFKBIEO00221 500 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 SMAD3P84022 425 aaKnown RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 BICDL1Q6ZP65 573 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 ZNF333Q96JL9 665 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 BRIP1Q9BX63 1249 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 KRTAP9-8Q9BYQ0 159 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 ZNF541Q9H0D2 1346 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 LOC285556D6RIA3 1793 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 PHIPQ8WWQ0 1821 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 HOXD10P28358 340 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 PTPN5P54829 565 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 MRPS5P82675 430 aaKnown RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 WAPLQ7Z5K2 1190 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 TDHQ8IZJ6 230 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 MAFAQ8NHW3 353 aaPredicted RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 CCDC88AQ3V6T2 1871 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 LTBP2Q14767 1821 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 IBTKQ9P2D0 1353 aaPredicted RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 C21orf2O43822 256 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 RPS12P25398 132 aaKnown RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 TM4SF1P30408 202 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 EAPPQ56P03 285 aaPredicted RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 JDP2Q8WYK2 163 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 ACSBG1Q96GR2 724 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 GBA2Q9HCG7 927 aaPredicted RBP2.37□□□□□ -2.03
ZNF260-203ENST00000588993 GRIN2DO15399 1336 aa2.37□□□□□ -2.03
ZNF260-203ENST00000588993 AOC2O75106 756 aa2.36□□□□□ -2.03
ZNF260-203ENST00000588993 CELF2O95319 508 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 490.7 ms