RNA–Protein interactions for RNA: ENST00000588737.5

RPRD1A-207, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2 BASIC

Gene RPRD1A, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-207ENST00000588737 GNAI1P63096 354 aa29.18■■■□□ 2.26
RPRD1A-207ENST00000588737 RTKN2Q8IZC4 609 aa29.18■■■□□ 2.26
RPRD1A-207ENST00000588737 ARFGEF2Q9Y6D5 1785 aa29.17■■■□□ 2.26
RPRD1A-207ENST00000588737 ZNF853P0CG23 659 aa29.17■■■□□ 2.26
RPRD1A-207ENST00000588737 IFT57Q9NWB7 429 aa29.17■■■□□ 2.26
RPRD1A-207ENST00000588737 DBF4Q9UBU7 674 aaPredicted RBP29.17■■■□□ 2.26
RPRD1A-207ENST00000588737 OLFM4Q6UX06 510 aa29.16■■■□□ 2.26
RPRD1A-207ENST00000588737 RBM17Q96I25 401 aaKnown RBP29.16■■■□□ 2.26
RPRD1A-207ENST00000588737 NLRP3Q96P20 1036 aa29.16■■■□□ 2.26
RPRD1A-207ENST00000588737 ANP32CO43423 234 aa29.15■■■□□ 2.26
RPRD1A-207ENST00000588737 FKBP4Q02790 459 aaKnown RBP eCLIP29.15■■■□□ 2.26
RPRD1A-207ENST00000588737 TCIRG1Q13488 830 aa29.15■■■□□ 2.26
RPRD1A-207ENST00000588737 HOXA10P31260 410 aaPredicted RBP29.14■■■□□ 2.26
RPRD1A-207ENST00000588737 APLP1P51693 650 aa29.13■■■□□ 2.25
RPRD1A-207ENST00000588737 FSTL1Q12841 308 aa29.13■■■□□ 2.25
RPRD1A-207ENST00000588737 SLC10A5Q5PT55 438 aa29.13■■■□□ 2.25
RPRD1A-207ENST00000588737 NLRP10Q86W26 655 aa29.13■■■□□ 2.25
RPRD1A-207ENST00000588737 HYPKQ9NX55 129 aa29.13■■■□□ 2.25
RPRD1A-207ENST00000588737 RIC1Q4ADV7 1423 aa29.12■■■□□ 2.25
RPRD1A-207ENST00000588737 TNRC6CQ9HCJ0 1690 aaKnown RBP29.12■■■□□ 2.25
RPRD1A-207ENST00000588737 TIAM2Q8IVF5 1701 aa29.12■■■□□ 2.25
RPRD1A-207ENST00000588737 ANKRD13DQ6ZTN6 518 aa29.12■■■□□ 2.25
RPRD1A-207ENST00000588737 PLBD2Q8NHP8 589 aa29.12■■■□□ 2.25
RPRD1A-207ENST00000588737 CRAMP1Q96RY5 1269 aa29.12■■■□□ 2.25
RPRD1A-207ENST00000588737 ZNF277Q9NRM2 450 aaPredicted RBP29.12■■■□□ 2.25
RPRD1A-207ENST00000588737 ELL2O00472 640 aaPredicted RBP29.11■■■□□ 2.25
RPRD1A-207ENST00000588737 CC2D2BQ6DHV5 1058 aa29.11■■■□□ 2.25
RPRD1A-207ENST00000588737 SYNE4Q8N205 404 aa29.11■■■□□ 2.25
RPRD1A-207ENST00000588737 TRMT112Q9UI30 125 aaKnown RBP29.11■■■□□ 2.25
RPRD1A-207ENST00000588737 DICER1Q9UPY3 1922 aaKnown RBP29.1■■■□□ 2.25
RPRD1A-207ENST00000588737 C3orf67Q6ZVT6 689 aa29.1■■■□□ 2.25
RPRD1A-207ENST00000588737 MRS2Q9HD23 443 aa29.1■■■□□ 2.25
RPRD1A-207ENST00000588737 RNF123Q5XPI4 1314 aa29.1■■■□□ 2.25
RPRD1A-207ENST00000588737 SMC1BQ8NDV3 1235 aa29.09■■■□□ 2.25
RPRD1A-207ENST00000588737 TCERG1O14776 1098 aaKnown RBP29.08■■■□□ 2.25
RPRD1A-207ENST00000588737 DDNO94850 711 aaPredicted RBP29.08■■■□□ 2.25
RPRD1A-207ENST00000588737 CEP350Q5VT06 3117 aa29.08■■■□□ 2.25
RPRD1A-207ENST00000588737 POTECB2RU33 542 aa29.07■■■□□ 2.24
RPRD1A-207ENST00000588737 TMX4Q9H1E5 349 aaPredicted RBP29.07■■■□□ 2.24
RPRD1A-207ENST00000588737 PPEF1O14829 653 aaPredicted RBP29.06■■■□□ 2.24
RPRD1A-207ENST00000588737 HCLS1P14317 486 aaPredicted RBP29.06■■■□□ 2.24
RPRD1A-207ENST00000588737 IARSP41252 1262 aaKnown RBP29.06■■■□□ 2.24
RPRD1A-207ENST00000588737 GRIPAP1Q4V328 841 aa29.06■■■□□ 2.24
RPRD1A-207ENST00000588737 PSMD1Q99460 953 aa29.06■■■□□ 2.24
RPRD1A-207ENST00000588737 SH3TC1Q8TE82 1336 aa29.05■■■□□ 2.24
RPRD1A-207ENST00000588737 C8orf58Q8NAV2 365 aa29.05■■■□□ 2.24
RPRD1A-207ENST00000588737 ZNF428Q96B54 188 aa29.05■■■□□ 2.24
RPRD1A-207ENST00000588737 CHMP4AQ9BY43 222 aa29.05■■■□□ 2.24
RPRD1A-207ENST00000588737 ATP5J2-PTCD1G3V325 749 aa29.03■■■□□ 2.24
RPRD1A-207ENST00000588737 RIC3Q7Z5B4 369 aa29.03■■■□□ 2.24
RPRD1A-207ENST00000588737 ISCA1Q9BUE6 129 aa29.03■■■□□ 2.24
RPRD1A-207ENST00000588737 CCDC27Q2M243 656 aa29.02■■■□□ 2.24
RPRD1A-207ENST00000588737 JDP2Q8WYK2 163 aa29.02■■■□□ 2.24
RPRD1A-207ENST00000588737 ANKRD36CQ5JPF3 1778 aa29.02■■■□□ 2.24
RPRD1A-207ENST00000588737 WDR90Q96KV7 1748 aa29.01■■■□□ 2.23
RPRD1A-207ENST00000588737 GOLGA2Q08379 1002 aa29.01■■■□□ 2.23
RPRD1A-207ENST00000588737 PHAXQ9H814 394 aaKnown RBP29.01■■■□□ 2.23
RPRD1A-207ENST00000588737 CCDC30Q5VVM6 783 aa29■■■□□ 2.23
RPRD1A-207ENST00000588737 DDX46Q7L014 1031 aaKnown RBP29■■■□□ 2.23
RPRD1A-207ENST00000588737 WWC1Q8IX03 1113 aa29■■■□□ 2.23
RPRD1A-207ENST00000588737 ATP6V0A2Q9Y487 856 aa29■■■□□ 2.23
RPRD1A-207ENST00000588737 BBOX1O75936 387 aa28.99■■■□□ 2.23
RPRD1A-207ENST00000588737 ABCC4O15439 1325 aa28.98■■■□□ 2.23
RPRD1A-207ENST00000588737 IQCA1LA6NCM1 817 aa28.98■■■□□ 2.23
RPRD1A-207ENST00000588737 TSR2Q969E8 191 aaKnown RBP28.98■■■□□ 2.23
RPRD1A-207ENST00000588737 FAM89AQ96GI7 184 aa28.98■■■□□ 2.23
RPRD1A-207ENST00000588737 FZD9O00144 591 aa28.97■■■□□ 2.23
RPRD1A-207ENST00000588737 TRIM28Q13263 835 aaKnown RBP28.97■■■□□ 2.23
RPRD1A-207ENST00000588737 TSPYL6Q8N831 410 aa28.97■■■□□ 2.23
RPRD1A-207ENST00000588737 ZNF541Q9H0D2 1346 aa28.96■■■□□ 2.23
RPRD1A-207ENST00000588737 SNED1Q8TER0 1413 aa28.96■■■□□ 2.23
RPRD1A-207ENST00000588737 SLC51AQ86UW1 340 aa28.96■■■□□ 2.23
RPRD1A-207ENST00000588737 LARGE2Q8N3Y3 721 aa28.96■■■□□ 2.23
RPRD1A-207ENST00000588737 HTRA3P83110 453 aa28.95■■■□□ 2.22
RPRD1A-207ENST00000588737 NCBP3Q53F19 620 aaKnown RBP28.95■■■□□ 2.22
RPRD1A-207ENST00000588737 SP8Q8IXZ3 490 aa28.95■■■□□ 2.22
RPRD1A-207ENST00000588737 DNAJC5GQ8N7S2 189 aa28.95■■■□□ 2.22
RPRD1A-207ENST00000588737 L3MBTL3Q96JM7 780 aaPredicted RBP28.95■■■□□ 2.22
RPRD1A-207ENST00000588737 DDX58O95786 925 aaKnown RBP28.94■■■□□ 2.22
RPRD1A-207ENST00000588737 EIF6P56537 245 aaKnown RBP28.94■■■□□ 2.22
RPRD1A-207ENST00000588737 RTL5Q5HYW3 569 aaPredicted RBP28.94■■■□□ 2.22
RPRD1A-207ENST00000588737 SALL2Q9Y467 1007 aaPredicted RBP28.94■■■□□ 2.22
RPRD1A-207ENST00000588737 GRAPQ13588 217 aa28.93■■■□□ 2.22
RPRD1A-207ENST00000588737 GRAPLQ8TC17 118 aaPredicted RBP28.93■■■□□ 2.22
RPRD1A-207ENST00000588737 MYD88Q99836 296 aa28.93■■■□□ 2.22
RPRD1A-207ENST00000588737 IL16Q14005 1332 aa28.93■■■□□ 2.22
RPRD1A-207ENST00000588737 CHADLQ6NUI6 762 aa28.92■■■□□ 2.22
RPRD1A-207ENST00000588737 SUPT20HQ8NEM7 779 aa28.92■■■□□ 2.22
RPRD1A-207ENST00000588737 IRS4O14654 1257 aaPredicted RBP28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 DPP8Q6V1X1 898 aaPredicted RBP28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 GPC2Q8N158 579 aa28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 MPNDQ8N594 471 aa28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 STK31Q9BXU1 1019 aa28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 TAF1DQ9H5J8 278 aaPredicted RBP28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 HACL1Q9UJ83 578 aa28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 GJA3Q9Y6H8 435 aa28.91■■■□□ 2.22
RPRD1A-207ENST00000588737 PPIP5K2O43314 1243 aa28.9■■■□□ 2.22
RPRD1A-207ENST00000588737 SF3B3Q15393 1217 aaKnown RBP28.9■■■□□ 2.22
RPRD1A-207ENST00000588737 NIM1KQ8IY84 436 aa28.9■■■□□ 2.22
RPRD1A-207ENST00000588737 VPS33BQ9H267 617 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms