RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 CCDC173Q0VFZ6 552 aa13.58□□□□□ -0.24
BCAS3-220ENST00000588720 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
BCAS3-220ENST00000588720 TMEM131LA2VDJ0 1609 aa13.58□□□□□ -0.24
BCAS3-220ENST00000588720 SLC3A2P08195 630 aaKnown RBP13.57□□□□□ -0.24
BCAS3-220ENST00000588720 ARGLU1Q9NWB6 273 aaPredicted RBP13.57□□□□□ -0.24
BCAS3-220ENST00000588720 CCDC39Q9UFE4 941 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 ERBB3P21860 1342 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 TECPR2O15040 1411 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 GOLIM4O00461 696 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
BCAS3-220ENST00000588720 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
BCAS3-220ENST00000588720 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 SLC5A1P13866 664 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 HMGB1P09429 215 aaKnown RBP13.57□□□□□ -0.24
BCAS3-220ENST00000588720 USP44Q9H0E7 712 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 KAT6BQ8WYB5 2073 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 CDC42BPGQ6DT37 1551 aa13.57□□□□□ -0.24
BCAS3-220ENST00000588720 ERVV-2B6SEH9 535 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 XBP1P17861 261 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 OTUD7AQ8TE49 926 aaPredicted RBP13.56□□□□□ -0.24
BCAS3-220ENST00000588720 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
BCAS3-220ENST00000588720 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 KRT85P78386 507 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 PDE4CQ08493 712 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 ACSBG1Q96GR2 724 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
BCAS3-220ENST00000588720 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 CAVIN4Q5BKX8 364 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 CCDC83Q8IWF9 413 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 CHMLP26374 656 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 TDO2P48775 406 aa13.55□□□□□ -0.24
BCAS3-220ENST00000588720 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
BCAS3-220ENST00000588720 TNPO1Q92973 898 aaKnown RBP13.55□□□□□ -0.24
BCAS3-220ENST00000588720 ZNF396Q96N95 335 aaPredicted RBP13.55□□□□□ -0.24
BCAS3-220ENST00000588720 CDC5LQ99459 802 aaKnown RBP13.55□□□□□ -0.24
BCAS3-220ENST00000588720 ACBD3Q9H3P7 528 aa13.54□□□□□ -0.24
BCAS3-220ENST00000588720 ABCF2Q9UG63 623 aa13.54□□□□□ -0.24
BCAS3-220ENST00000588720 AOX1Q06278 1338 aa13.54□□□□□ -0.24
BCAS3-220ENST00000588720 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
BCAS3-220ENST00000588720 TTF1Q15361 905 aaPredicted RBP13.54□□□□□ -0.24
BCAS3-220ENST00000588720 GCKRQ14397 625 aa13.54□□□□□ -0.24
BCAS3-220ENST00000588720 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
BCAS3-220ENST00000588720 USP26Q9BXU7 913 aa13.54□□□□□ -0.24
BCAS3-220ENST00000588720 ZMYND15Q9H091 742 aa13.54□□□□□ -0.24
BCAS3-220ENST00000588720 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
BCAS3-220ENST00000588720 DDX46Q7L014 1031 aaKnown RBP13.53□□□□□ -0.24
BCAS3-220ENST00000588720 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
BCAS3-220ENST00000588720 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 CCDC191Q8NCU4 936 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 SSH3Q8TE77 659 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 SNRKQ9NRH2 765 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 MARCH6O60337 910 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 SSFA2P28290 1259 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 BRMS1Q9HCU9 246 aa13.53□□□□□ -0.24
BCAS3-220ENST00000588720 CDKL5O76039 1030 aa13.52□□□□□ -0.24
BCAS3-220ENST00000588720 A1BGP04217 495 aa13.52□□□□□ -0.24
BCAS3-220ENST00000588720 ATP2B3Q16720 1220 aa13.52□□□□□ -0.24
BCAS3-220ENST00000588720 CCDC152Q4G0S7 254 aa13.52□□□□□ -0.24
BCAS3-220ENST00000588720 BEND3Q5T5X7 828 aa13.52□□□□□ -0.24
BCAS3-220ENST00000588720 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
BCAS3-220ENST00000588720 USP8P40818 1118 aa13.52□□□□□ -0.25
BCAS3-220ENST00000588720 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
BCAS3-220ENST00000588720 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
BCAS3-220ENST00000588720 ZFYP08048 801 aaPredicted RBP13.52□□□□□ -0.25
BCAS3-220ENST00000588720 TMX3Q96JJ7 454 aa13.52□□□□□ -0.25
BCAS3-220ENST00000588720 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
BCAS3-220ENST00000588720 UQCRFS1P1P0C7P4 283 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 DHX8Q14562 1220 aaKnown RBP13.51□□□□□ -0.25
BCAS3-220ENST00000588720 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 MYO3AQ8NEV4 1616 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 KDRP35968 1356 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 TFCP2Q12800 502 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 ERBB4Q15303 1308 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 ZNF213O14771 459 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 NAPBQ9H115 298 aa13.51□□□□□ -0.25
BCAS3-220ENST00000588720 RBM8AQ9Y5S9 174 aaKnown RBP13.51□□□□□ -0.25
BCAS3-220ENST00000588720 WDR17Q8IZU2 1322 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 UBAC1Q9BSL1 405 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
BCAS3-220ENST00000588720 KINO60870 393 aaKnown RBP13.5□□□□□ -0.25
BCAS3-220ENST00000588720 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 SPATA31A3Q5VYP0 1347 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 STK38Q15208 465 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 MCMDC2Q4G0Z9 681 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
BCAS3-220ENST00000588720 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
BCAS3-220ENST00000588720 UTP14AQ9BVJ6 771 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms