RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 UBTFL1P0CB47 393 aaPredicted RBP28.43■■■□□ 2.14
ACTN4-210ENST00000588618 TRIM28Q13263 835 aaKnown RBP28.43■■■□□ 2.14
ACTN4-210ENST00000588618 ZNF34Q8IZ26 560 aa28.43■■■□□ 2.14
ACTN4-210ENST00000588618 COL23A1Q86Y22 540 aaPredicted RBP28.42■■■□□ 2.14
ACTN4-210ENST00000588618 PPP4R2Q9NY27 417 aa28.42■■■□□ 2.14
ACTN4-210ENST00000588618 HDAC5Q9UQL6 1122 aa28.42■■■□□ 2.14
ACTN4-210ENST00000588618 UTYO14607 1347 aa28.41■■■□□ 2.14
ACTN4-210ENST00000588618 PNPLA7Q6ZV29 1317 aa28.41■■■□□ 2.14
ACTN4-210ENST00000588618 GRM8O00222 908 aa28.41■■■□□ 2.14
ACTN4-210ENST00000588618 PARP10Q53GL7 1025 aa28.4■■■□□ 2.14
ACTN4-210ENST00000588618 NLRP10Q86W26 655 aa28.4■■■□□ 2.14
ACTN4-210ENST00000588618 JARID2Q92833 1246 aaPredicted RBP28.4■■■□□ 2.14
ACTN4-210ENST00000588618 BICDL1Q6ZP65 573 aa28.4■■■□□ 2.14
ACTN4-210ENST00000588618 B4GALNT3Q6L9W6 998 aa28.39■■■□□ 2.14
ACTN4-210ENST00000588618 SETDB2Q96T68 719 aa28.39■■■□□ 2.14
ACTN4-210ENST00000588618 COL24A1Q17RW2 1714 aa28.39■■■□□ 2.13
ACTN4-210ENST00000588618 CASP7P55210 303 aa28.38■■■□□ 2.13
ACTN4-210ENST00000588618 GYS1P13807 737 aa28.38■■■□□ 2.13
ACTN4-210ENST00000588618 TBC1D9BQ66K14 1250 aa28.38■■■□□ 2.13
ACTN4-210ENST00000588618 PPP1R42Q7Z4L9 355 aa28.38■■■□□ 2.13
ACTN4-210ENST00000588618 GNAI2P04899 355 aa28.37■■■□□ 2.13
ACTN4-210ENST00000588618 UBE3BQ7Z3V4 1068 aa28.37■■■□□ 2.13
ACTN4-210ENST00000588618 KAZALD1Q96I82 304 aa28.37■■■□□ 2.13
ACTN4-210ENST00000588618 LRRFIP2Q9Y608 721 aaKnown RBP28.37■■■□□ 2.13
ACTN4-210ENST00000588618 TRMT112Q9UI30 125 aaKnown RBP28.36■■■□□ 2.13
ACTN4-210ENST00000588618 FAM177BA6PVY3 158 aa28.35■■■□□ 2.13
ACTN4-210ENST00000588618 H7C1W4 665 aa28.35■■■□□ 2.13
ACTN4-210ENST00000588618 RTL5Q5HYW3 569 aaPredicted RBP28.35■■■□□ 2.13
ACTN4-210ENST00000588618 SIRT2Q8IXJ6 389 aa28.35■■■□□ 2.13
ACTN4-210ENST00000588618 ZBTB38Q8NAP3 1195 aaPredicted RBP28.35■■■□□ 2.13
ACTN4-210ENST00000588618 SUCLG2Q96I99 432 aa28.35■■■□□ 2.13
ACTN4-210ENST00000588618 UTP14AQ9BVJ6 771 aaKnown RBP28.35■■■□□ 2.13
ACTN4-210ENST00000588618 SUSD4Q5VX71 490 aa28.34■■■□□ 2.13
ACTN4-210ENST00000588618 SYNE4Q8N205 404 aa28.34■■■□□ 2.13
ACTN4-210ENST00000588618 NLGN1Q8N2Q7 840 aa28.34■■■□□ 2.13
ACTN4-210ENST00000588618 NPHP1O15259 732 aa28.33■■■□□ 2.13
ACTN4-210ENST00000588618 PCCAP05165 728 aaPredicted RBP28.32■■■□□ 2.12
ACTN4-210ENST00000588618 CEP85Q6P2H3 762 aa28.32■■■□□ 2.12
ACTN4-210ENST00000588618 CCDC136Q96JN2 1154 aa28.32■■■□□ 2.12
ACTN4-210ENST00000588618 GTF2E1P29083 439 aaPredicted RBP28.32■■■□□ 2.12
ACTN4-210ENST00000588618 FAM89AQ96GI7 184 aa28.32■■■□□ 2.12
ACTN4-210ENST00000588618 NYXQ9GZU5 481 aa28.32■■■□□ 2.12
ACTN4-210ENST00000588618 CARMIL3Q8ND23 1372 aa28.31■■■□□ 2.12
ACTN4-210ENST00000588618 IGHDP01880 384 aa28.31■■■□□ 2.12
ACTN4-210ENST00000588618 NFIXQ14938 502 aa28.31■■■□□ 2.12
ACTN4-210ENST00000588618 EPHA10Q5JZY3 1008 aa28.31■■■□□ 2.12
ACTN4-210ENST00000588618 NBPF5PQ86XG9 351 aaPredicted RBP28.31■■■□□ 2.12
ACTN4-210ENST00000588618 SH3TC1Q8TE82 1336 aa28.31■■■□□ 2.12
ACTN4-210ENST00000588618 DDX60Q8IY21 1712 aaKnown RBP28.3■■■□□ 2.12
ACTN4-210ENST00000588618 NTSR2O95665 410 aa28.3■■■□□ 2.12
ACTN4-210ENST00000588618 HSP90B1P14625 803 aaKnown RBP28.29■■■□□ 2.12
ACTN4-210ENST00000588618 TPTE2Q6XPS3 522 aa28.29■■■□□ 2.12
ACTN4-210ENST00000588618 ANKRD44Q8N8A2 993 aa28.29■■■□□ 2.12
ACTN4-210ENST00000588618 PDGFDQ9GZP0 370 aaPredicted RBP28.29■■■□□ 2.12
ACTN4-210ENST00000588618 MYH3P11055 1940 aa28.28■■■□□ 2.12
ACTN4-210ENST00000588618 BICC1Q9H694 974 aaKnown RBP28.28■■■□□ 2.12
ACTN4-210ENST00000588618 LAMB2P55268 1798 aa28.28■■■□□ 2.12
ACTN4-210ENST00000588618 CASZ1Q86V15 1759 aa28.28■■■□□ 2.12
ACTN4-210ENST00000588618 CDHR2Q9BYE9 1310 aa28.26■■■□□ 2.12
ACTN4-210ENST00000588618 PNMA6EA0A0J9YXQ4 647 aa28.26■■■□□ 2.12
ACTN4-210ENST00000588618 MSL1Q68DK7 614 aa28.26■■■□□ 2.12
ACTN4-210ENST00000588618 KDM2BQ8NHM5 1336 aa28.26■■■□□ 2.11
ACTN4-210ENST00000588618 IRS4O14654 1257 aaPredicted RBP28.26■■■□□ 2.11
ACTN4-210ENST00000588618 RPAP2Q8IXW5 612 aaPredicted RBP28.26■■■□□ 2.11
ACTN4-210ENST00000588618 SLC16A10Q8TF71 515 aa28.26■■■□□ 2.11
ACTN4-210ENST00000588618 TM4SF1P30408 202 aa28.25■■■□□ 2.11
ACTN4-210ENST00000588618 R3HDM1Q15032 1099 aaKnown RBP28.25■■■□□ 2.11
ACTN4-210ENST00000588618 NUTM1Q86Y26 1132 aa28.25■■■□□ 2.11
ACTN4-210ENST00000588618 FOXO4P98177 505 aa28.24■■■□□ 2.11
ACTN4-210ENST00000588618 HDAC1Q13547 482 aaPredicted RBP28.24■■■□□ 2.11
ACTN4-210ENST00000588618 ATP8B2P98198 1209 aa28.23■■■□□ 2.11
ACTN4-210ENST00000588618 CNBD1Q8NA66 436 aa28.23■■■□□ 2.11
ACTN4-210ENST00000588618 HMMRO75330 724 aa28.23■■■□□ 2.11
ACTN4-210ENST00000588618 DDR1Q08345 913 aa28.23■■■□□ 2.11
ACTN4-210ENST00000588618 MTX1Q13505 466 aa28.23■■■□□ 2.11
ACTN4-210ENST00000588618 PARP3Q9Y6F1 533 aa28.23■■■□□ 2.11
ACTN4-210ENST00000588618 SERPINB2P05120 415 aa28.22■■■□□ 2.11
ACTN4-210ENST00000588618 RABL6Q3YEC7 729 aaPredicted RBP28.22■■■□□ 2.11
ACTN4-210ENST00000588618 RWDD1Q9H446 243 aaPredicted RBP28.22■■■□□ 2.11
ACTN4-210ENST00000588618 MMP10P09238 476 aa28.21■■■□□ 2.11
ACTN4-210ENST00000588618 PLA2G12BQ9BX93 195 aa28.21■■■□□ 2.11
ACTN4-210ENST00000588618 CHMP3Q9Y3E7 222 aa28.21■■■□□ 2.11
ACTN4-210ENST00000588618 ABCC12Q96J65 1359 aa28.21■■■□□ 2.11
ACTN4-210ENST00000588618 POLRMTO00411 1230 aaKnown RBP28.21■■■□□ 2.11
ACTN4-210ENST00000588618 PDE8AO60658 829 aa28.21■■■□□ 2.11
ACTN4-210ENST00000588618 ST5P78524 1137 aa28.21■■■□□ 2.11
ACTN4-210ENST00000588618 ERFEQ4G0M1 354 aa28.21■■■□□ 2.11
ACTN4-210ENST00000588618 NRXN2Q9P2S2 1712 aa28.2■■■□□ 2.1
ACTN4-210ENST00000588618 SRGAP3O43295 1099 aa28.19■■■□□ 2.1
ACTN4-210ENST00000588618 HCLS1P14317 486 aaPredicted RBP28.19■■■□□ 2.1
ACTN4-210ENST00000588618 POLA2Q14181 598 aa28.19■■■□□ 2.1
ACTN4-210ENST00000588618 SSH3Q8TE77 659 aa28.19■■■□□ 2.1
ACTN4-210ENST00000588618 LMBR1LQ6UX01 489 aa28.18■■■□□ 2.1
ACTN4-210ENST00000588618 CCDC24Q8N4L8 307 aa28.18■■■□□ 2.1
ACTN4-210ENST00000588618 TNRC6CQ9HCJ0 1690 aaKnown RBP28.18■■■□□ 2.1
ACTN4-210ENST00000588618 PSDA5PKW4 1024 aaPredicted RBP28.17■■■□□ 2.1
ACTN4-210ENST00000588618 CTSWP56202 376 aa28.17■■■□□ 2.1
ACTN4-210ENST00000588618 PRR5LQ6MZQ0 368 aa28.16■■■□□ 2.1
ACTN4-210ENST00000588618 CSF1RP07333 972 aa28.15■■■□□ 2.1
ACTN4-210ENST00000588618 SLC10A5Q5PT55 438 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms